RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 CDC42BPGQ6DT37 1551 aa28.37■■■□□ 2.13
SREBF1-220ENST00000581707 NHSL1Q5SYE7 1610 aa28.37■■■□□ 2.13
SREBF1-220ENST00000581707 ORAI2Q96SN7 254 aa28.36■■■□□ 2.13
SREBF1-220ENST00000581707 DDX17Q92841 729 aaKnown RBP28.35■■■□□ 2.13
SREBF1-220ENST00000581707 SPATA31A6Q5VVP1 1343 aa28.32■■■□□ 2.12
SREBF1-220ENST00000581707 ADGRB1O14514 1584 aa28.32■■■□□ 2.12
SREBF1-220ENST00000581707 SHPRHQ149N8 1683 aa28.32■■■□□ 2.12
SREBF1-220ENST00000581707 LRRC59Q96AG4 307 aaKnown RBP28.31■■■□□ 2.12
SREBF1-220ENST00000581707 PRAM1Q96QH2 718 aa28.31■■■□□ 2.12
SREBF1-220ENST00000581707 ESCO1Q5FWF5 840 aa28.3■■■□□ 2.12
SREBF1-220ENST00000581707 POGKQ9P215 609 aa28.29■■■□□ 2.12
SREBF1-220ENST00000581707 RGS17Q9UGC6 210 aaPredicted RBP28.29■■■□□ 2.12
SREBF1-220ENST00000581707 DLC1Q96QB1 1528 aa28.28■■■□□ 2.12
SREBF1-220ENST00000581707 NUTM2FA1L443 756 aa28.28■■■□□ 2.12
SREBF1-220ENST00000581707 SAFB2Q14151 953 aaKnown RBP eCLIP28.28■■■□□ 2.12
SREBF1-220ENST00000581707 TRAK1Q9UPV9 953 aa28.28■■■□□ 2.12
SREBF1-220ENST00000581707 SOCS7O14512 581 aa28.27■■■□□ 2.12
SREBF1-220ENST00000581707 TRIM26Q12899 539 aaPredicted RBP28.27■■■□□ 2.12
SREBF1-220ENST00000581707 FMN2Q9NZ56 1722 aa28.24■■■□□ 2.11
SREBF1-220ENST00000581707 SOS2Q07890 1332 aaPredicted RBP28.23■■■□□ 2.11
SREBF1-220ENST00000581707 LRP6O75581 1613 aa28.23■■■□□ 2.11
SREBF1-220ENST00000581707 MEX3CQ5U5Q3 659 aaKnown RBP28.22■■■□□ 2.11
SREBF1-220ENST00000581707 NUTM2BA6NNL0 878 aaPredicted RBP28.21■■■□□ 2.11
SREBF1-220ENST00000581707 NUTM2EB1AL46 878 aaPredicted RBP28.21■■■□□ 2.11
SREBF1-220ENST00000581707 NUTM2AQ8IVF1 878 aaPredicted RBP28.21■■■□□ 2.11
SREBF1-220ENST00000581707 SIN3AQ96ST3 1273 aa28.21■■■□□ 2.11
SREBF1-220ENST00000581707 NPHP3Q7Z494 1330 aa28.2■■■□□ 2.11
SREBF1-220ENST00000581707 FOXO3O43524 673 aa28.19■■■□□ 2.1
SREBF1-220ENST00000581707 PNPLA6Q8IY17 1366 aa28.19■■■□□ 2.1
SREBF1-220ENST00000581707 NEUROD1Q13562 356 aa28.18■■■□□ 2.1
SREBF1-220ENST00000581707 KIAA1210Q9ULL0 1709 aa28.18■■■□□ 2.1
SREBF1-220ENST00000581707 L3MBTL2Q969R5 705 aa28.17■■■□□ 2.1
SREBF1-220ENST00000581707 RGPD8O14715 1765 aaPredicted RBP28.15■■■□□ 2.1
SREBF1-220ENST00000581707 POTEAQ6S8J7 498 aa28.15■■■□□ 2.1
SREBF1-220ENST00000581707 MINK1Q8N4C8 1332 aaPredicted RBP28.15■■■□□ 2.1
SREBF1-220ENST00000581707 HIRIP3Q9BW71 556 aaPredicted RBP28.14■■■□□ 2.1
SREBF1-220ENST00000581707 ADGRB2O60241 1585 aa28.13■■■□□ 2.09
SREBF1-220ENST00000581707 XPCQ01831 940 aaPredicted RBP28.13■■■□□ 2.09
SREBF1-220ENST00000581707 PXDNQ92626 1479 aa28.13■■■□□ 2.09
SREBF1-220ENST00000581707 KIF1AQ12756 1690 aa28.13■■■□□ 2.09
SREBF1-220ENST00000581707 NBPF1Q3BBV0 1214 aa28.12■■■□□ 2.09
SREBF1-220ENST00000581707 ARHGEF28Q8N1W1 1705 aaKnown RBP28.12■■■□□ 2.09
SREBF1-220ENST00000581707 PHF8Q9UPP1 1060 aa28.11■■■□□ 2.09
SREBF1-220ENST00000581707 ANKARQ7Z5J8 1434 aa28.09■■■□□ 2.09
SREBF1-220ENST00000581707 WASLO00401 505 aaPredicted RBP28.07■■■□□ 2.08
SREBF1-220ENST00000581707 ZNF772Q68DY9 489 aaPredicted RBP28.07■■■□□ 2.08
SREBF1-220ENST00000581707 KRT28Q7Z3Y7 464 aa28.06■■■□□ 2.08
SREBF1-220ENST00000581707 EIF3AQ14152 1382 aaKnown RBP28.06■■■□□ 2.08
SREBF1-220ENST00000581707 USP32Q8NFA0 1604 aa28.06■■■□□ 2.08
SREBF1-220ENST00000581707 COL22A1Q8NFW1 1626 aaPredicted RBP28.04■■■□□ 2.08
SREBF1-220ENST00000581707 ADAMTS2O95450 1211 aa28.03■■■□□ 2.08
SREBF1-220ENST00000581707 C8orf37Q96NL8 207 aa28.03■■■□□ 2.08
SREBF1-220ENST00000581707 PSME1Q06323 249 aa28.02■■■□□ 2.08
SREBF1-220ENST00000581707 PMFBP1Q8TBY8 1022 aa28.02■■■□□ 2.08
SREBF1-220ENST00000581707 TULP4Q9NRJ4 1543 aa28.02■■■□□ 2.08
SREBF1-220ENST00000581707 AFF2P51816 1311 aa28.01■■■□□ 2.07
SREBF1-220ENST00000581707 SPATA31A3Q5VYP0 1347 aa28.01■■■□□ 2.07
SREBF1-220ENST00000581707 PRR36Q9H6K5 1346 aa28■■■□□ 2.07
SREBF1-220ENST00000581707 NGLY1Q96IV0 654 aa27.98■■■□□ 2.07
SREBF1-220ENST00000581707 TRPM1Q7Z4N2 1603 aa27.97■■■□□ 2.07
SREBF1-220ENST00000581707 CDK19Q9BWU1 502 aa27.96■■■□□ 2.07
SREBF1-220ENST00000581707 CENPJQ9HC77 1338 aaPredicted RBP27.94■■■□□ 2.06
SREBF1-220ENST00000581707 NUDT16Q96DE0 195 aaKnown RBP27.94■■■□□ 2.06
SREBF1-220ENST00000581707 SBNO1A3KN83 1393 aa27.94■■■□□ 2.06
SREBF1-220ENST00000581707 TNS3Q68CZ2 1445 aa27.93■■■□□ 2.06
SREBF1-220ENST00000581707 ROCK2O75116 1388 aaKnown RBP27.91■■■□□ 2.06
SREBF1-220ENST00000581707 GPRASP1Q5JY77 1395 aa27.91■■■□□ 2.06
SREBF1-220ENST00000581707 TONSLQ96HA7 1378 aa27.91■■■□□ 2.06
SREBF1-220ENST00000581707 RXRBP28702 533 aa27.91■■■□□ 2.06
SREBF1-220ENST00000581707 NBPF8Q3BBV2 869 aa27.91■■■□□ 2.06
SREBF1-220ENST00000581707 LMOD2Q6P5Q4 547 aa27.91■■■□□ 2.06
SREBF1-220ENST00000581707 NGDNQ8NEJ9 315 aaKnown RBP27.91■■■□□ 2.06
SREBF1-220ENST00000581707 ATP7BP35670 1465 aa27.9■■■□□ 2.06
SREBF1-220ENST00000581707 ITSN1Q15811 1721 aa27.9■■■□□ 2.06
SREBF1-220ENST00000581707 QTRT2Q9H974 415 aaKnown RBP27.89■■■□□ 2.06
SREBF1-220ENST00000581707 MARF1Q9Y4F3 1742 aaKnown RBP27.88■■■□□ 2.05
SREBF1-220ENST00000581707 QRICH2Q9H0J4 1663 aa27.87■■■□□ 2.05
SREBF1-220ENST00000581707 ARHGEF10O15013 1369 aa27.87■■■□□ 2.05
SREBF1-220ENST00000581707 FNBP4Q8N3X1 1017 aaPredicted RBP27.87■■■□□ 2.05
SREBF1-220ENST00000581707 USP21Q9UK80 565 aa27.86■■■□□ 2.05
SREBF1-220ENST00000581707 CCDC61Q9Y6R9 512 aa27.86■■■□□ 2.05
SREBF1-220ENST00000581707 TRPM3Q9HCF6 1732 aaPredicted RBP27.85■■■□□ 2.05
SREBF1-220ENST00000581707 PLEKHG5O94827 1062 aa27.84■■■□□ 2.05
SREBF1-220ENST00000581707 HAP1P54257 671 aaPredicted RBP27.84■■■□□ 2.05
SREBF1-220ENST00000581707 SRPK2P78362 688 aaKnown RBP27.84■■■□□ 2.05
SREBF1-220ENST00000581707 CABLES1Q8TDN4 633 aa27.84■■■□□ 2.05
SREBF1-220ENST00000581707 RBM6P78332 1123 aaKnown RBP27.82■■■□□ 2.04
SREBF1-220ENST00000581707 TOPAZ1Q8N9V7 1692 aa27.81■■■□□ 2.04
SREBF1-220ENST00000581707 PAK3O75914 559 aaPredicted RBP27.81■■■□□ 2.04
SREBF1-220ENST00000581707 CABP2Q9NPB3 220 aa27.81■■■□□ 2.04
SREBF1-220ENST00000581707 PLEKHG3A1L390 1219 aa27.8■■■□□ 2.04
SREBF1-220ENST00000581707 TRPC5Q9UL62 973 aaPredicted RBP27.8■■■□□ 2.04
SREBF1-220ENST00000581707 ALS2Q96Q42 1657 aa27.8■■■□□ 2.04
SREBF1-220ENST00000581707 CDK12Q9NYV4 1490 aaPredicted RBP27.79■■■□□ 2.04
SREBF1-220ENST00000581707 ACEP12821 1306 aa27.79■■■□□ 2.04
SREBF1-220ENST00000581707 POLR3AO14802 1390 aaPredicted RBP27.78■■■□□ 2.04
SREBF1-220ENST00000581707 CARD11Q9BXL7 1154 aa27.77■■■□□ 2.04
SREBF1-220ENST00000581707 BCL9LQ86UU0 1499 aa27.76■■■□□ 2.04
SREBF1-220ENST00000581707 ABCA3Q99758 1704 aa27.76■■■□□ 2.03
SREBF1-220ENST00000581707 EVC2Q86UK5 1308 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms