RNA–Protein interactions for RNA: ENST00000581356.1

SLC9A3R1-204, Transcript of SLC9A3 regulator 1, humanhuman

TSL 3

Gene SLC9A3R1, Length 519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-204ENST00000581356 LAMC1P11047 1609 aa18.46■□□□□ 0.55
SLC9A3R1-204ENST00000581356 KNDC1Q76NI1 1749 aa18.46■□□□□ 0.55
SLC9A3R1-204ENST00000581356 NUTM2FA1L443 756 aa18.43■□□□□ 0.54
SLC9A3R1-204ENST00000581356 SAFB2Q14151 953 aaKnown RBP eCLIP18.43■□□□□ 0.54
SLC9A3R1-204ENST00000581356 PRAM1Q96QH2 718 aa18.43■□□□□ 0.54
SLC9A3R1-204ENST00000581356 RGS17Q9UGC6 210 aaPredicted RBP18.43■□□□□ 0.54
SLC9A3R1-204ENST00000581356 CDC42BPGQ6DT37 1551 aa18.42■□□□□ 0.54
SLC9A3R1-204ENST00000581356 NHSL1Q5SYE7 1610 aa18.42■□□□□ 0.54
SLC9A3R1-204ENST00000581356 ESCO1Q5FWF5 840 aa18.42■□□□□ 0.54
SLC9A3R1-204ENST00000581356 LRRC59Q96AG4 307 aaKnown RBP18.42■□□□□ 0.54
SLC9A3R1-204ENST00000581356 SPATA31A6Q5VVP1 1343 aa18.42■□□□□ 0.54
SLC9A3R1-204ENST00000581356 POGKQ9P215 609 aa18.41■□□□□ 0.54
SLC9A3R1-204ENST00000581356 TRAK1Q9UPV9 953 aa18.41■□□□□ 0.54
SLC9A3R1-204ENST00000581356 ADGRB1O14514 1584 aa18.41■□□□□ 0.54
SLC9A3R1-204ENST00000581356 SOCS7O14512 581 aa18.4■□□□□ 0.54
SLC9A3R1-204ENST00000581356 TRIM26Q12899 539 aaPredicted RBP18.39■□□□□ 0.53
SLC9A3R1-204ENST00000581356 SHPRHQ149N8 1683 aa18.38■□□□□ 0.53
SLC9A3R1-204ENST00000581356 NUTM2BA6NNL0 878 aaPredicted RBP18.38■□□□□ 0.53
SLC9A3R1-204ENST00000581356 NUTM2EB1AL46 878 aaPredicted RBP18.38■□□□□ 0.53
SLC9A3R1-204ENST00000581356 NUTM2AQ8IVF1 878 aaPredicted RBP18.38■□□□□ 0.53
SLC9A3R1-204ENST00000581356 SIN3AQ96ST3 1273 aa18.38■□□□□ 0.53
SLC9A3R1-204ENST00000581356 DLC1Q96QB1 1528 aa18.38■□□□□ 0.53
SLC9A3R1-204ENST00000581356 MEX3CQ5U5Q3 659 aaKnown RBP18.37■□□□□ 0.53
SLC9A3R1-204ENST00000581356 SOS2Q07890 1332 aaPredicted RBP18.37■□□□□ 0.53
SLC9A3R1-204ENST00000581356 LRP6O75581 1613 aa18.37■□□□□ 0.53
SLC9A3R1-204ENST00000581356 FOXO3O43524 673 aa18.36■□□□□ 0.53
SLC9A3R1-204ENST00000581356 PNPLA6Q8IY17 1366 aa18.35■□□□□ 0.53
SLC9A3R1-204ENST00000581356 NEUROD1Q13562 356 aa18.35■□□□□ 0.53
SLC9A3R1-204ENST00000581356 NPHP3Q7Z494 1330 aa18.34■□□□□ 0.53
SLC9A3R1-204ENST00000581356 POTEAQ6S8J7 498 aa18.34■□□□□ 0.53
SLC9A3R1-204ENST00000581356 FMN2Q9NZ56 1722 aa18.34■□□□□ 0.53
SLC9A3R1-204ENST00000581356 MINK1Q8N4C8 1332 aaPredicted RBP18.33■□□□□ 0.53
SLC9A3R1-204ENST00000581356 XPCQ01831 940 aaPredicted RBP18.33■□□□□ 0.52
SLC9A3R1-204ENST00000581356 L3MBTL2Q969R5 705 aa18.33■□□□□ 0.52
SLC9A3R1-204ENST00000581356 HIRIP3Q9BW71 556 aaPredicted RBP18.33■□□□□ 0.52
SLC9A3R1-204ENST00000581356 NBPF1Q3BBV0 1214 aa18.32■□□□□ 0.52
SLC9A3R1-204ENST00000581356 PXDNQ92626 1479 aa18.29■□□□□ 0.52
SLC9A3R1-204ENST00000581356 PHF8Q9UPP1 1060 aa18.29■□□□□ 0.52
SLC9A3R1-204ENST00000581356 KIAA1210Q9ULL0 1709 aa18.27■□□□□ 0.52
SLC9A3R1-204ENST00000581356 ADGRB2O60241 1585 aa18.27■□□□□ 0.52
SLC9A3R1-204ENST00000581356 RGPD8O14715 1765 aaPredicted RBP18.27■□□□□ 0.51
SLC9A3R1-204ENST00000581356 WASLO00401 505 aaPredicted RBP18.26■□□□□ 0.51
SLC9A3R1-204ENST00000581356 ADAMTS2O95450 1211 aa18.26■□□□□ 0.51
SLC9A3R1-204ENST00000581356 ZNF772Q68DY9 489 aaPredicted RBP18.26■□□□□ 0.51
SLC9A3R1-204ENST00000581356 KRT28Q7Z3Y7 464 aa18.26■□□□□ 0.51
SLC9A3R1-204ENST00000581356 ARHGEF28Q8N1W1 1705 aaKnown RBP18.26■□□□□ 0.51
SLC9A3R1-204ENST00000581356 ANKARQ7Z5J8 1434 aa18.25■□□□□ 0.51
SLC9A3R1-204ENST00000581356 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
SLC9A3R1-204ENST00000581356 C8orf37Q96NL8 207 aa18.25■□□□□ 0.51
SLC9A3R1-204ENST00000581356 KIF1AQ12756 1690 aa18.25■□□□□ 0.51
SLC9A3R1-204ENST00000581356 AFF2P51816 1311 aa18.23■□□□□ 0.51
SLC9A3R1-204ENST00000581356 PRR36Q9H6K5 1346 aa18.23■□□□□ 0.51
SLC9A3R1-204ENST00000581356 USP32Q8NFA0 1604 aa18.23■□□□□ 0.51
SLC9A3R1-204ENST00000581356 PSME1Q06323 249 aa18.23■□□□□ 0.51
SLC9A3R1-204ENST00000581356 SPATA31A3Q5VYP0 1347 aa18.23■□□□□ 0.51
SLC9A3R1-204ENST00000581356 EIF3AQ14152 1382 aaKnown RBP18.22■□□□□ 0.51
SLC9A3R1-204ENST00000581356 NGLY1Q96IV0 654 aa18.22■□□□□ 0.51
SLC9A3R1-204ENST00000581356 TULP4Q9NRJ4 1543 aa18.21■□□□□ 0.51
SLC9A3R1-204ENST00000581356 COL22A1Q8NFW1 1626 aaPredicted RBP18.2■□□□□ 0.5
SLC9A3R1-204ENST00000581356 CDK19Q9BWU1 502 aa18.2■□□□□ 0.5
SLC9A3R1-204ENST00000581356 NUDT16Q96DE0 195 aaKnown RBP18.19■□□□□ 0.5
SLC9A3R1-204ENST00000581356 LMOD2Q6P5Q4 547 aa18.18■□□□□ 0.5
SLC9A3R1-204ENST00000581356 CENPJQ9HC77 1338 aaPredicted RBP18.18■□□□□ 0.5
SLC9A3R1-204ENST00000581356 NBPF8Q3BBV2 869 aa18.17■□□□□ 0.5
SLC9A3R1-204ENST00000581356 NGDNQ8NEJ9 315 aaKnown RBP18.17■□□□□ 0.5
SLC9A3R1-204ENST00000581356 SBNO1A3KN83 1393 aa18.17■□□□□ 0.5
SLC9A3R1-204ENST00000581356 TNS3Q68CZ2 1445 aa18.16■□□□□ 0.5
SLC9A3R1-204ENST00000581356 PLEKHG5O94827 1062 aa18.16■□□□□ 0.5
SLC9A3R1-204ENST00000581356 RXRBP28702 533 aa18.16■□□□□ 0.5
SLC9A3R1-204ENST00000581356 QTRT2Q9H974 415 aaKnown RBP18.16■□□□□ 0.5
SLC9A3R1-204ENST00000581356 ROCK2O75116 1388 aaKnown RBP18.16■□□□□ 0.5
SLC9A3R1-204ENST00000581356 GPRASP1Q5JY77 1395 aa18.16■□□□□ 0.5
SLC9A3R1-204ENST00000581356 TRPM1Q7Z4N2 1603 aa18.16■□□□□ 0.5
SLC9A3R1-204ENST00000581356 TONSLQ96HA7 1378 aa18.16■□□□□ 0.5
SLC9A3R1-204ENST00000581356 ATP7BP35670 1465 aa18.14■□□□□ 0.5
SLC9A3R1-204ENST00000581356 CABLES1Q8TDN4 633 aa18.14■□□□□ 0.49
SLC9A3R1-204ENST00000581356 USP21Q9UK80 565 aa18.14■□□□□ 0.49
SLC9A3R1-204ENST00000581356 FNBP4Q8N3X1 1017 aaPredicted RBP18.13■□□□□ 0.49
SLC9A3R1-204ENST00000581356 HAP1P54257 671 aaPredicted RBP18.12■□□□□ 0.49
SLC9A3R1-204ENST00000581356 SRPK2P78362 688 aaKnown RBP18.12■□□□□ 0.49
SLC9A3R1-204ENST00000581356 CCDC61Q9Y6R9 512 aa18.12■□□□□ 0.49
SLC9A3R1-204ENST00000581356 ARHGEF10O15013 1369 aa18.12■□□□□ 0.49
SLC9A3R1-204ENST00000581356 PAK3O75914 559 aaPredicted RBP18.11■□□□□ 0.49
SLC9A3R1-204ENST00000581356 CABP2Q9NPB3 220 aa18.11■□□□□ 0.49
SLC9A3R1-204ENST00000581356 RBM6P78332 1123 aaKnown RBP18.1■□□□□ 0.49
SLC9A3R1-204ENST00000581356 ITSN1Q15811 1721 aa18.09■□□□□ 0.49
SLC9A3R1-204ENST00000581356 QRICH2Q9H0J4 1663 aa18.09■□□□□ 0.49
SLC9A3R1-204ENST00000581356 PLEKHG3A1L390 1219 aa18.09■□□□□ 0.49
SLC9A3R1-204ENST00000581356 TRPC5Q9UL62 973 aaPredicted RBP18.09■□□□□ 0.49
SLC9A3R1-204ENST00000581356 TRPM3Q9HCF6 1732 aaPredicted RBP18.09■□□□□ 0.49
SLC9A3R1-204ENST00000581356 ACEP12821 1306 aa18.08■□□□□ 0.49
SLC9A3R1-204ENST00000581356 PCGF6Q9BYE7 350 aa18.08■□□□□ 0.48
SLC9A3R1-204ENST00000581356 MARF1Q9Y4F3 1742 aaKnown RBP18.08■□□□□ 0.48
SLC9A3R1-204ENST00000581356 CARD11Q9BXL7 1154 aa18.07■□□□□ 0.48
SLC9A3R1-204ENST00000581356 BCL9LQ86UU0 1499 aa18.07■□□□□ 0.48
SLC9A3R1-204ENST00000581356 POLR3AO14802 1390 aaPredicted RBP18.06■□□□□ 0.48
SLC9A3R1-204ENST00000581356 TOPAZ1Q8N9V7 1692 aa18.06■□□□□ 0.48
SLC9A3R1-204ENST00000581356 EVC2Q86UK5 1308 aa18.06■□□□□ 0.48
SLC9A3R1-204ENST00000581356 CDK12Q9NYV4 1490 aaPredicted RBP18.05■□□□□ 0.48
SLC9A3R1-204ENST00000581356 ALS2Q96Q42 1657 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms