RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 ROBO1Q9Y6N7 1651 aa23.56■■□□□ 1.36
IFT20-210ENST00000580357 MST1RQ04912 1400 aa23.56■■□□□ 1.36
IFT20-210ENST00000580357 DLC1Q96QB1 1528 aa23.55■■□□□ 1.36
IFT20-210ENST00000580357 ADGRB1O14514 1584 aa23.55■■□□□ 1.36
IFT20-210ENST00000580357 CLSPNQ9HAW4 1339 aa23.53■■□□□ 1.36
IFT20-210ENST00000580357 NALCNQ8IZF0 1738 aa23.53■■□□□ 1.36
IFT20-210ENST00000580357 TONSLQ96HA7 1378 aa23.52■■□□□ 1.36
IFT20-210ENST00000580357 PLEKHH1Q9ULM0 1364 aa23.52■■□□□ 1.36
IFT20-210ENST00000580357 C1orf167Q5SNV9 1468 aa23.51■■□□□ 1.35
IFT20-210ENST00000580357 KIAA1210Q9ULL0 1709 aa23.51■■□□□ 1.35
IFT20-210ENST00000580357 NBPF1Q3BBV0 1214 aa23.5■■□□□ 1.35
IFT20-210ENST00000580357 SAFB2Q14151 953 aaKnown RBP eCLIP23.49■■□□□ 1.35
IFT20-210ENST00000580357 CDC42BPGQ6DT37 1551 aa23.48■■□□□ 1.35
IFT20-210ENST00000580357 ESCO1Q5FWF5 840 aa23.47■■□□□ 1.35
IFT20-210ENST00000580357 ORAI2Q96SN7 254 aa23.46■■□□□ 1.35
IFT20-210ENST00000580357 TIMELESSQ9UNS1 1208 aa23.46■■□□□ 1.35
IFT20-210ENST00000580357 LRRC59Q96AG4 307 aaKnown RBP23.45■■□□□ 1.34
IFT20-210ENST00000580357 JCADQ9P266 1359 aa23.43■■□□□ 1.34
IFT20-210ENST00000580357 PHLPP1O60346 1717 aa23.43■■□□□ 1.34
IFT20-210ENST00000580357 AHDC1Q5TGY3 1603 aaPredicted RBP23.43■■□□□ 1.34
IFT20-210ENST00000580357 EIF3AQ14152 1382 aaKnown RBP23.41■■□□□ 1.34
IFT20-210ENST00000580357 MINK1Q8N4C8 1332 aaPredicted RBP23.41■■□□□ 1.34
IFT20-210ENST00000580357 NUTM2FA1L443 756 aa23.41■■□□□ 1.34
IFT20-210ENST00000580357 WASLO00401 505 aaPredicted RBP23.4■■□□□ 1.34
IFT20-210ENST00000580357 NBPF8Q3BBV2 869 aa23.4■■□□□ 1.34
IFT20-210ENST00000580357 ROCK2O75116 1388 aaKnown RBP23.4■■□□□ 1.34
IFT20-210ENST00000580357 NPHP3Q7Z494 1330 aa23.39■■□□□ 1.34
IFT20-210ENST00000580357 CCER1Q8TC90 406 aaPredicted RBP23.38■■□□□ 1.33
IFT20-210ENST00000580357 HIRIP3Q9BW71 556 aaPredicted RBP23.38■■□□□ 1.33
IFT20-210ENST00000580357 SOS2Q07890 1332 aaPredicted RBP23.36■■□□□ 1.33
IFT20-210ENST00000580357 SPATA31A6Q5VVP1 1343 aa23.36■■□□□ 1.33
IFT20-210ENST00000580357 CENPJQ9HC77 1338 aaPredicted RBP23.36■■□□□ 1.33
IFT20-210ENST00000580357 ANKARQ7Z5J8 1434 aa23.36■■□□□ 1.33
IFT20-210ENST00000580357 FOXO3O43524 673 aa23.36■■□□□ 1.33
IFT20-210ENST00000580357 COL16A1Q07092 1604 aaPredicted RBP23.35■■□□□ 1.33
IFT20-210ENST00000580357 DDX17Q92841 729 aaKnown RBP23.35■■□□□ 1.33
IFT20-210ENST00000580357 PHF8Q9UPP1 1060 aa23.35■■□□□ 1.33
IFT20-210ENST00000580357 FMN2Q9NZ56 1722 aa23.34■■□□□ 1.33
IFT20-210ENST00000580357 ADGRB2O60241 1585 aa23.34■■□□□ 1.33
IFT20-210ENST00000580357 TRPM1Q7Z4N2 1603 aa23.33■■□□□ 1.33
IFT20-210ENST00000580357 GPRASP1Q5JY77 1395 aa23.33■■□□□ 1.33
IFT20-210ENST00000580357 PSME1Q06323 249 aa23.33■■□□□ 1.33
IFT20-210ENST00000580357 CDK19Q9BWU1 502 aa23.33■■□□□ 1.33
IFT20-210ENST00000580357 CARD11Q9BXL7 1154 aa23.33■■□□□ 1.33
IFT20-210ENST00000580357 RGS17Q9UGC6 210 aaPredicted RBP23.33■■□□□ 1.33
IFT20-210ENST00000580357 ARHGEF28Q8N1W1 1705 aaKnown RBP23.33■■□□□ 1.32
IFT20-210ENST00000580357 NHSL1Q5SYE7 1610 aa23.33■■□□□ 1.32
IFT20-210ENST00000580357 KRT28Q7Z3Y7 464 aa23.29■■□□□ 1.32
IFT20-210ENST00000580357 NUDT16Q96DE0 195 aaKnown RBP23.29■■□□□ 1.32
IFT20-210ENST00000580357 CCDC61Q9Y6R9 512 aa23.27■■□□□ 1.32
IFT20-210ENST00000580357 TULP4Q9NRJ4 1543 aa23.27■■□□□ 1.32
IFT20-210ENST00000580357 SLC24A1O60721 1099 aa23.26■■□□□ 1.31
IFT20-210ENST00000580357 PMFBP1Q8TBY8 1022 aa23.26■■□□□ 1.31
IFT20-210ENST00000580357 EVC2Q86UK5 1308 aa23.26■■□□□ 1.31
IFT20-210ENST00000580357 KIF1AQ12756 1690 aa23.25■■□□□ 1.31
IFT20-210ENST00000580357 RALGAPBQ86X10 1494 aa23.25■■□□□ 1.31
IFT20-210ENST00000580357 SRPK2P78362 688 aaKnown RBP23.24■■□□□ 1.31
IFT20-210ENST00000580357 SHPRHQ149N8 1683 aa23.24■■□□□ 1.31
IFT20-210ENST00000580357 PRR36Q9H6K5 1346 aa23.24■■□□□ 1.31
IFT20-210ENST00000580357 PNPLA6Q8IY17 1366 aa23.24■■□□□ 1.31
IFT20-210ENST00000580357 MEX3CQ5U5Q3 659 aaKnown RBP23.23■■□□□ 1.31
IFT20-210ENST00000580357 NGDNQ8NEJ9 315 aaKnown RBP23.23■■□□□ 1.31
IFT20-210ENST00000580357 NUTM2BA6NNL0 878 aaPredicted RBP23.22■■□□□ 1.31
IFT20-210ENST00000580357 NUTM2EB1AL46 878 aaPredicted RBP23.22■■□□□ 1.31
IFT20-210ENST00000580357 XPCQ01831 940 aaPredicted RBP23.22■■□□□ 1.31
IFT20-210ENST00000580357 NUTM2AQ8IVF1 878 aaPredicted RBP23.22■■□□□ 1.31
IFT20-210ENST00000580357 PXDNQ92626 1479 aa23.22■■□□□ 1.31
IFT20-210ENST00000580357 PLEKHG3A1L390 1219 aa23.21■■□□□ 1.31
IFT20-210ENST00000580357 POTEAQ6S8J7 498 aa23.21■■□□□ 1.31
IFT20-210ENST00000580357 SPATA31A3Q5VYP0 1347 aa23.21■■□□□ 1.31
IFT20-210ENST00000580357 RGPD8O14715 1765 aaPredicted RBP23.21■■□□□ 1.31
IFT20-210ENST00000580357 SBNO1A3KN83 1393 aa23.2■■□□□ 1.3
IFT20-210ENST00000580357 USP32Q8NFA0 1604 aa23.19■■□□□ 1.3
IFT20-210ENST00000580357 CABP2Q9NPB3 220 aa23.18■■□□□ 1.3
IFT20-210ENST00000580357 SBNO2Q9Y2G9 1366 aa23.17■■□□□ 1.3
IFT20-210ENST00000580357 ATP7BP35670 1465 aa23.16■■□□□ 1.3
IFT20-210ENST00000580357 QRICH2Q9H0J4 1663 aa23.16■■□□□ 1.3
IFT20-210ENST00000580357 ARHGEF10O15013 1369 aa23.14■■□□□ 1.3
IFT20-210ENST00000580357 PUS7Q96PZ0 661 aaKnown RBP23.14■■□□□ 1.29
IFT20-210ENST00000580357 ACEP12821 1306 aa23.13■■□□□ 1.29
IFT20-210ENST00000580357 ZNF772Q68DY9 489 aaPredicted RBP23.13■■□□□ 1.29
IFT20-210ENST00000580357 LMOD2Q6P5Q4 547 aa23.13■■□□□ 1.29
IFT20-210ENST00000580357 POLR3AO14802 1390 aaPredicted RBP23.13■■□□□ 1.29
IFT20-210ENST00000580357 ITSN1Q15811 1721 aa23.12■■□□□ 1.29
IFT20-210ENST00000580357 TNS3Q68CZ2 1445 aa23.12■■□□□ 1.29
IFT20-210ENST00000580357 ST20-MTHFSA0A0A6YYL1 179 aa23.11■■□□□ 1.29
IFT20-210ENST00000580357 CABP1Q9NZU7 370 aa23.11■■□□□ 1.29
IFT20-210ENST00000580357 LRP6O75581 1613 aa23.11■■□□□ 1.29
IFT20-210ENST00000580357 PAK3O75914 559 aaPredicted RBP23.1■■□□□ 1.29
IFT20-210ENST00000580357 ZNF692Q9BU19 519 aaPredicted RBP23.1■■□□□ 1.29
IFT20-210ENST00000580357 ATAD2Q6PL18 1390 aa23.1■■□□□ 1.29
IFT20-210ENST00000580357 PPIP5K1Q6PFW1 1433 aa23.09■■□□□ 1.29
IFT20-210ENST00000580357 COL22A1Q8NFW1 1626 aaPredicted RBP23.09■■□□□ 1.29
IFT20-210ENST00000580357 ADAMTS2O95450 1211 aa23.09■■□□□ 1.29
IFT20-210ENST00000580357 NGLY1Q96IV0 654 aa23.09■■□□□ 1.29
IFT20-210ENST00000580357 BRD4O60885 1362 aaPredicted RBP23.09■■□□□ 1.29
IFT20-210ENST00000580357 HAP1P54257 671 aaPredicted RBP23.08■■□□□ 1.29
IFT20-210ENST00000580357 C8orf37Q96NL8 207 aa23.08■■□□□ 1.29
IFT20-210ENST00000580357 TESK2Q96S53 571 aa23.05■■□□□ 1.28
IFT20-210ENST00000580357 USP47Q96K76 1375 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms