RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 PRAM1Q96QH2 718 aa37.98■■■■□ 3.67
LIMD2-208ENST00000579814 POGKQ9P215 609 aa37.98■■■■□ 3.67
LIMD2-208ENST00000579814 DDX17Q92841 729 aaKnown RBP37.96■■■■□ 3.67
LIMD2-208ENST00000579814 LRRC59Q96AG4 307 aaKnown RBP37.96■■■■□ 3.67
LIMD2-208ENST00000579814 COL16A1Q07092 1604 aaPredicted RBP37.96■■■■□ 3.67
LIMD2-208ENST00000579814 TRAK1Q9UPV9 953 aa37.95■■■■□ 3.67
LIMD2-208ENST00000579814 ESCO1Q5FWF5 840 aa37.94■■■■□ 3.66
LIMD2-208ENST00000579814 SPATA31A6Q5VVP1 1343 aa37.93■■■■□ 3.66
LIMD2-208ENST00000579814 SAFB2Q14151 953 aaKnown RBP eCLIP37.93■■■■□ 3.66
LIMD2-208ENST00000579814 KNDC1Q76NI1 1749 aa37.92■■■■□ 3.66
LIMD2-208ENST00000579814 NUTM2FA1L443 756 aa37.91■■■■□ 3.66
LIMD2-208ENST00000579814 CDC42BPGQ6DT37 1551 aa37.9■■■■□ 3.66
LIMD2-208ENST00000579814 SIN3AQ96ST3 1273 aa37.9■■■■□ 3.66
LIMD2-208ENST00000579814 ADGRB1O14514 1584 aa37.89■■■■□ 3.66
LIMD2-208ENST00000579814 NEUROD1Q13562 356 aa37.87■■■■□ 3.65
LIMD2-208ENST00000579814 DLC1Q96QB1 1528 aa37.86■■■■□ 3.65
LIMD2-208ENST00000579814 SOS2Q07890 1332 aaPredicted RBP37.84■■■■□ 3.65
LIMD2-208ENST00000579814 L3MBTL2Q969R5 705 aa37.83■■■■□ 3.65
LIMD2-208ENST00000579814 RGS17Q9UGC6 210 aaPredicted RBP37.83■■■■□ 3.65
LIMD2-208ENST00000579814 NPHP3Q7Z494 1330 aa37.82■■■■□ 3.64
LIMD2-208ENST00000579814 MEX3CQ5U5Q3 659 aaKnown RBP37.81■■■■□ 3.64
LIMD2-208ENST00000579814 NHSL1Q5SYE7 1610 aa37.79■■■■□ 3.64
LIMD2-208ENST00000579814 NUTM2BA6NNL0 878 aaPredicted RBP37.79■■■■□ 3.64
LIMD2-208ENST00000579814 NUTM2EB1AL46 878 aaPredicted RBP37.79■■■■□ 3.64
LIMD2-208ENST00000579814 FOXO3O43524 673 aa37.79■■■■□ 3.64
LIMD2-208ENST00000579814 NUTM2AQ8IVF1 878 aaPredicted RBP37.79■■■■□ 3.64
LIMD2-208ENST00000579814 SOCS7O14512 581 aa37.77■■■■□ 3.64
LIMD2-208ENST00000579814 NBPF1Q3BBV0 1214 aa37.74■■■■□ 3.63
LIMD2-208ENST00000579814 MINK1Q8N4C8 1332 aaPredicted RBP37.74■■■■□ 3.63
LIMD2-208ENST00000579814 HIRIP3Q9BW71 556 aaPredicted RBP37.74■■■■□ 3.63
LIMD2-208ENST00000579814 PNPLA6Q8IY17 1366 aa37.73■■■■□ 3.63
LIMD2-208ENST00000579814 SHPRHQ149N8 1683 aa37.71■■■■□ 3.63
LIMD2-208ENST00000579814 PHF8Q9UPP1 1060 aa37.7■■■■□ 3.63
LIMD2-208ENST00000579814 LRP6O75581 1613 aa37.69■■■■□ 3.62
LIMD2-208ENST00000579814 XPCQ01831 940 aaPredicted RBP37.69■■■■□ 3.62
LIMD2-208ENST00000579814 WASLO00401 505 aaPredicted RBP37.67■■■■□ 3.62
LIMD2-208ENST00000579814 POTEAQ6S8J7 498 aa37.66■■■■□ 3.62
LIMD2-208ENST00000579814 FMN2Q9NZ56 1722 aa37.65■■■■□ 3.62
LIMD2-208ENST00000579814 EIF3AQ14152 1382 aaKnown RBP37.64■■■■□ 3.62
LIMD2-208ENST00000579814 KRT28Q7Z3Y7 464 aa37.63■■■■□ 3.61
LIMD2-208ENST00000579814 ANKARQ7Z5J8 1434 aa37.62■■■■□ 3.61
LIMD2-208ENST00000579814 ZNF772Q68DY9 489 aaPredicted RBP37.62■■■■□ 3.61
LIMD2-208ENST00000579814 PXDNQ92626 1479 aa37.6■■■■□ 3.61
LIMD2-208ENST00000579814 PSME1Q06323 249 aa37.6■■■■□ 3.61
LIMD2-208ENST00000579814 KIAA1210Q9ULL0 1709 aa37.59■■■■□ 3.61
LIMD2-208ENST00000579814 PMFBP1Q8TBY8 1022 aa37.58■■■■□ 3.61
LIMD2-208ENST00000579814 ADGRB2O60241 1585 aa37.58■■■■□ 3.61
LIMD2-208ENST00000579814 ADAMTS2O95450 1211 aa37.56■■■■□ 3.6
LIMD2-208ENST00000579814 C8orf37Q96NL8 207 aa37.55■■■■□ 3.6
LIMD2-208ENST00000579814 CDK19Q9BWU1 502 aa37.53■■■■□ 3.6
LIMD2-208ENST00000579814 SPATA31A3Q5VYP0 1347 aa37.53■■■■□ 3.6
LIMD2-208ENST00000579814 PRR36Q9H6K5 1346 aa37.53■■■■□ 3.6
LIMD2-208ENST00000579814 KIF1AQ12756 1690 aa37.51■■■■□ 3.6
LIMD2-208ENST00000579814 CENPJQ9HC77 1338 aaPredicted RBP37.51■■■■□ 3.6
LIMD2-208ENST00000579814 TONSLQ96HA7 1378 aa37.51■■■■□ 3.59
LIMD2-208ENST00000579814 NGLY1Q96IV0 654 aa37.5■■■■□ 3.59
LIMD2-208ENST00000579814 AFF2P51816 1311 aa37.5■■■■□ 3.59
LIMD2-208ENST00000579814 NUDT16Q96DE0 195 aaKnown RBP37.49■■■■□ 3.59
LIMD2-208ENST00000579814 TULP4Q9NRJ4 1543 aa37.48■■■■□ 3.59
LIMD2-208ENST00000579814 ROCK2O75116 1388 aaKnown RBP37.48■■■■□ 3.59
LIMD2-208ENST00000579814 ARHGEF28Q8N1W1 1705 aaKnown RBP37.47■■■■□ 3.59
LIMD2-208ENST00000579814 NBPF8Q3BBV2 869 aa37.46■■■■□ 3.59
LIMD2-208ENST00000579814 NGDNQ8NEJ9 315 aaKnown RBP37.46■■■■□ 3.59
LIMD2-208ENST00000579814 SBNO1A3KN83 1393 aa37.44■■■■□ 3.58
LIMD2-208ENST00000579814 GPRASP1Q5JY77 1395 aa37.44■■■■□ 3.58
LIMD2-208ENST00000579814 LMOD2Q6P5Q4 547 aa37.43■■■■□ 3.58
LIMD2-208ENST00000579814 USP32Q8NFA0 1604 aa37.41■■■■□ 3.58
LIMD2-208ENST00000579814 CCDC61Q9Y6R9 512 aa37.41■■■■□ 3.58
LIMD2-208ENST00000579814 TNS3Q68CZ2 1445 aa37.4■■■■□ 3.58
LIMD2-208ENST00000579814 PCGF6Q9BYE7 350 aa37.39■■■■□ 3.58
LIMD2-208ENST00000579814 RGPD8O14715 1765 aaPredicted RBP37.39■■■■□ 3.58
LIMD2-208ENST00000579814 RXRBP28702 533 aa37.38■■■■□ 3.57
LIMD2-208ENST00000579814 SRPK2P78362 688 aaKnown RBP37.38■■■■□ 3.57
LIMD2-208ENST00000579814 COL22A1Q8NFW1 1626 aaPredicted RBP37.38■■■■□ 3.57
LIMD2-208ENST00000579814 QTRT2Q9H974 415 aaKnown RBP37.37■■■■□ 3.57
LIMD2-208ENST00000579814 HAP1P54257 671 aaPredicted RBP37.36■■■■□ 3.57
LIMD2-208ENST00000579814 ARHGEF10O15013 1369 aa37.36■■■■□ 3.57
LIMD2-208ENST00000579814 FNBP4Q8N3X1 1017 aaPredicted RBP37.35■■■■□ 3.57
LIMD2-208ENST00000579814 ATP7BP35670 1465 aa37.34■■■■□ 3.57
LIMD2-208ENST00000579814 USP21Q9UK80 565 aa37.34■■■■□ 3.57
LIMD2-208ENST00000579814 TRPM1Q7Z4N2 1603 aa37.32■■■■□ 3.57
LIMD2-208ENST00000579814 CARD11Q9BXL7 1154 aa37.32■■■■□ 3.56
LIMD2-208ENST00000579814 CABP2Q9NPB3 220 aa37.32■■■■□ 3.56
LIMD2-208ENST00000579814 PLEKHG5O94827 1062 aa37.31■■■■□ 3.56
LIMD2-208ENST00000579814 PLEKHG3A1L390 1219 aa37.3■■■■□ 3.56
LIMD2-208ENST00000579814 PAK3O75914 559 aaPredicted RBP37.3■■■■□ 3.56
LIMD2-208ENST00000579814 CABLES1Q8TDN4 633 aa37.3■■■■□ 3.56
LIMD2-208ENST00000579814 EVC2Q86UK5 1308 aa37.28■■■■□ 3.56
LIMD2-208ENST00000579814 RBM6P78332 1123 aaKnown RBP37.27■■■■□ 3.56
LIMD2-208ENST00000579814 ACEP12821 1306 aa37.27■■■■□ 3.56
LIMD2-208ENST00000579814 TRPC5Q9UL62 973 aaPredicted RBP37.26■■■■□ 3.56
LIMD2-208ENST00000579814 POLR3AO14802 1390 aaPredicted RBP37.23■■■■□ 3.55
LIMD2-208ENST00000579814 RALGAPBQ86X10 1494 aa37.19■■■■□ 3.54
LIMD2-208ENST00000579814 CLSPNQ9HAW4 1339 aa37.18■■■■□ 3.54
LIMD2-208ENST00000579814 CABP1Q9NZU7 370 aa37.18■■■■□ 3.54
LIMD2-208ENST00000579814 PPIP5K1Q6PFW1 1433 aa37.18■■■■□ 3.54
LIMD2-208ENST00000579814 ITSN1Q15811 1721 aa37.16■■■■□ 3.54
LIMD2-208ENST00000579814 QRICH2Q9H0J4 1663 aa37.15■■■■□ 3.54
LIMD2-208ENST00000579814 UNC5CLQ8IV45 518 aa37.14■■■■□ 3.54
LIMD2-208ENST00000579814 BCL9LQ86UU0 1499 aa37.13■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms