RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 PRAM1Q96QH2 718 aa25.18■■□□□ 1.62
ITGB4-205ENST00000579211 ADGRB1O14514 1584 aa25.18■■□□□ 1.62
ITGB4-205ENST00000579211 CDC42BPGQ6DT37 1551 aa25.18■■□□□ 1.62
ITGB4-205ENST00000579211 L3MBTL2Q969R5 705 aa25.17■■□□□ 1.62
ITGB4-205ENST00000579211 PCGF6Q9BYE7 350 aa25.17■■□□□ 1.62
ITGB4-205ENST00000579211 DLC1Q96QB1 1528 aa25.16■■□□□ 1.62
ITGB4-205ENST00000579211 RGPD8O14715 1765 aaPredicted RBP25.16■■□□□ 1.62
ITGB4-205ENST00000579211 NHSL1Q5SYE7 1610 aa25.15■■□□□ 1.62
ITGB4-205ENST00000579211 AHDC1Q5TGY3 1603 aaPredicted RBP25.15■■□□□ 1.62
ITGB4-205ENST00000579211 C1orf167Q5SNV9 1468 aa25.15■■□□□ 1.62
ITGB4-205ENST00000579211 MED1Q15648 1581 aaPredicted RBP25.15■■□□□ 1.62
ITGB4-205ENST00000579211 COL16A1Q07092 1604 aaPredicted RBP25.15■■□□□ 1.62
ITGB4-205ENST00000579211 NUTM2FA1L443 756 aa25.14■■□□□ 1.62
ITGB4-205ENST00000579211 FMN2Q9NZ56 1722 aa25.14■■□□□ 1.61
ITGB4-205ENST00000579211 ARHGEF28Q8N1W1 1705 aaKnown RBP25.12■■□□□ 1.61
ITGB4-205ENST00000579211 ESCO1Q5FWF5 840 aa25.12■■□□□ 1.61
ITGB4-205ENST00000579211 PHF23Q9BUL5 403 aaPredicted RBP25.12■■□□□ 1.61
ITGB4-205ENST00000579211 ORAI2Q96SN7 254 aa25.11■■□□□ 1.61
ITGB4-205ENST00000579211 JCADQ9P266 1359 aa25.1■■□□□ 1.61
ITGB4-205ENST00000579211 TONSLQ96HA7 1378 aa25.08■■□□□ 1.61
ITGB4-205ENST00000579211 DDX17Q92841 729 aaKnown RBP25.07■■□□□ 1.6
ITGB4-205ENST00000579211 MINK1Q8N4C8 1332 aaPredicted RBP25.07■■□□□ 1.6
ITGB4-205ENST00000579211 SHPRHQ149N8 1683 aa25.07■■□□□ 1.6
ITGB4-205ENST00000579211 NBPF1Q3BBV0 1214 aa25.06■■□□□ 1.6
ITGB4-205ENST00000579211 LRRC59Q96AG4 307 aaKnown RBP25.05■■□□□ 1.6
ITGB4-205ENST00000579211 HIRIP3Q9BW71 556 aaPredicted RBP25.05■■□□□ 1.6
ITGB4-205ENST00000579211 TRPM1Q7Z4N2 1603 aa25.04■■□□□ 1.6
ITGB4-205ENST00000579211 KIF1AQ12756 1690 aa25.03■■□□□ 1.6
ITGB4-205ENST00000579211 ADGRB2O60241 1585 aa25.01■■□□□ 1.59
ITGB4-205ENST00000579211 NPHP3Q7Z494 1330 aa25■■□□□ 1.59
ITGB4-205ENST00000579211 FOXO3O43524 673 aa24.99■■□□□ 1.59
ITGB4-205ENST00000579211 MEX3CQ5U5Q3 659 aaKnown RBP24.99■■□□□ 1.59
ITGB4-205ENST00000579211 SPATA31A6Q5VVP1 1343 aa24.99■■□□□ 1.59
ITGB4-205ENST00000579211 EIF3AQ14152 1382 aaKnown RBP24.98■■□□□ 1.59
ITGB4-205ENST00000579211 ROCK2O75116 1388 aaKnown RBP24.97■■□□□ 1.59
ITGB4-205ENST00000579211 NUTM2BA6NNL0 878 aaPredicted RBP24.97■■□□□ 1.59
ITGB4-205ENST00000579211 NUTM2EB1AL46 878 aaPredicted RBP24.97■■□□□ 1.59
ITGB4-205ENST00000579211 NUTM2AQ8IVF1 878 aaPredicted RBP24.97■■□□□ 1.59
ITGB4-205ENST00000579211 ITSN1Q15811 1721 aa24.96■■□□□ 1.59
ITGB4-205ENST00000579211 WASLO00401 505 aaPredicted RBP24.96■■□□□ 1.59
ITGB4-205ENST00000579211 PHF8Q9UPP1 1060 aa24.96■■□□□ 1.59
ITGB4-205ENST00000579211 QRICH2Q9H0J4 1663 aa24.96■■□□□ 1.59
ITGB4-205ENST00000579211 USP32Q8NFA0 1604 aa24.94■■□□□ 1.58
ITGB4-205ENST00000579211 SOS2Q07890 1332 aaPredicted RBP24.94■■□□□ 1.58
ITGB4-205ENST00000579211 XPCQ01831 940 aaPredicted RBP24.94■■□□□ 1.58
ITGB4-205ENST00000579211 CENPJQ9HC77 1338 aaPredicted RBP24.93■■□□□ 1.58
ITGB4-205ENST00000579211 ANKARQ7Z5J8 1434 aa24.93■■□□□ 1.58
ITGB4-205ENST00000579211 NBPF8Q3BBV2 869 aa24.91■■□□□ 1.58
ITGB4-205ENST00000579211 TULP4Q9NRJ4 1543 aa24.91■■□□□ 1.58
ITGB4-205ENST00000579211 PSME1Q06323 249 aa24.9■■□□□ 1.58
ITGB4-205ENST00000579211 PMFBP1Q8TBY8 1022 aa24.9■■□□□ 1.58
ITGB4-205ENST00000579211 KRT28Q7Z3Y7 464 aa24.89■■□□□ 1.58
ITGB4-205ENST00000579211 CDK19Q9BWU1 502 aa24.89■■□□□ 1.58
ITGB4-205ENST00000579211 PNPLA6Q8IY17 1366 aa24.89■■□□□ 1.57
ITGB4-205ENST00000579211 PXDNQ92626 1479 aa24.88■■□□□ 1.57
ITGB4-205ENST00000579211 ILDR2Q71H61 639 aa24.87■■□□□ 1.57
ITGB4-205ENST00000579211 CCER1Q8TC90 406 aaPredicted RBP24.87■■□□□ 1.57
ITGB4-205ENST00000579211 LRP6O75581 1613 aa24.86■■□□□ 1.57
ITGB4-205ENST00000579211 CARD11Q9BXL7 1154 aa24.86■■□□□ 1.57
ITGB4-205ENST00000579211 SRPK2P78362 688 aaKnown RBP24.85■■□□□ 1.57
ITGB4-205ENST00000579211 NGDNQ8NEJ9 315 aaKnown RBP24.85■■□□□ 1.57
ITGB4-205ENST00000579211 NUDT16Q96DE0 195 aaKnown RBP24.85■■□□□ 1.57
ITGB4-205ENST00000579211 CLSPNQ9HAW4 1339 aa24.85■■□□□ 1.57
ITGB4-205ENST00000579211 LMOD2Q6P5Q4 547 aa24.84■■□□□ 1.57
ITGB4-205ENST00000579211 COL22A1Q8NFW1 1626 aaPredicted RBP24.83■■□□□ 1.57
ITGB4-205ENST00000579211 PRR36Q9H6K5 1346 aa24.83■■□□□ 1.56
ITGB4-205ENST00000579211 GPRASP1Q5JY77 1395 aa24.82■■□□□ 1.56
ITGB4-205ENST00000579211 MARF1Q9Y4F3 1742 aaKnown RBP24.81■■□□□ 1.56
ITGB4-205ENST00000579211 ADAMTS2O95450 1211 aa24.81■■□□□ 1.56
ITGB4-205ENST00000579211 RALGAPBQ86X10 1494 aa24.81■■□□□ 1.56
ITGB4-205ENST00000579211 ATP7BP35670 1465 aa24.79■■□□□ 1.56
ITGB4-205ENST00000579211 C8orf37Q96NL8 207 aa24.79■■□□□ 1.56
ITGB4-205ENST00000579211 RGS17Q9UGC6 210 aaPredicted RBP24.79■■□□□ 1.56
ITGB4-205ENST00000579211 SPATA31A3Q5VYP0 1347 aa24.79■■□□□ 1.56
ITGB4-205ENST00000579211 TOPAZ1Q8N9V7 1692 aa24.78■■□□□ 1.56
ITGB4-205ENST00000579211 PLEKHG5O94827 1062 aa24.78■■□□□ 1.56
ITGB4-205ENST00000579211 HAP1P54257 671 aaPredicted RBP24.78■■□□□ 1.56
ITGB4-205ENST00000579211 CABP2Q9NPB3 220 aa24.78■■□□□ 1.56
ITGB4-205ENST00000579211 EVC2Q86UK5 1308 aa24.78■■□□□ 1.56
ITGB4-205ENST00000579211 ZNF772Q68DY9 489 aaPredicted RBP24.77■■□□□ 1.56
ITGB4-205ENST00000579211 CCDC61Q9Y6R9 512 aa24.77■■□□□ 1.56
ITGB4-205ENST00000579211 TNS3Q68CZ2 1445 aa24.77■■□□□ 1.56
ITGB4-205ENST00000579211 PAK3O75914 559 aaPredicted RBP24.76■■□□□ 1.55
ITGB4-205ENST00000579211 NGLY1Q96IV0 654 aa24.76■■□□□ 1.55
ITGB4-205ENST00000579211 TIMELESSQ9UNS1 1208 aa24.76■■□□□ 1.55
ITGB4-205ENST00000579211 SBNO1A3KN83 1393 aa24.75■■□□□ 1.55
ITGB4-205ENST00000579211 TRPM3Q9HCF6 1732 aaPredicted RBP24.75■■□□□ 1.55
ITGB4-205ENST00000579211 AFF2P51816 1311 aa24.73■■□□□ 1.55
ITGB4-205ENST00000579211 ARHGEF10O15013 1369 aa24.72■■□□□ 1.55
ITGB4-205ENST00000579211 POTEAQ6S8J7 498 aa24.72■■□□□ 1.55
ITGB4-205ENST00000579211 PPIP5K1Q6PFW1 1433 aa24.71■■□□□ 1.55
ITGB4-205ENST00000579211 ACEP12821 1306 aa24.71■■□□□ 1.55
ITGB4-205ENST00000579211 ALS2Q96Q42 1657 aa24.69■■□□□ 1.54
ITGB4-205ENST00000579211 PLEKHG3A1L390 1219 aa24.68■■□□□ 1.54
ITGB4-205ENST00000579211 ABCA3Q99758 1704 aa24.67■■□□□ 1.54
ITGB4-205ENST00000579211 CABLES1Q8TDN4 633 aa24.67■■□□□ 1.54
ITGB4-205ENST00000579211 CABP1Q9NZU7 370 aa24.66■■□□□ 1.54
ITGB4-205ENST00000579211 SOCS7O14512 581 aa24.65■■□□□ 1.54
ITGB4-205ENST00000579211 POLR3AO14802 1390 aaPredicted RBP24.65■■□□□ 1.54
ITGB4-205ENST00000579211 USP21Q9UK80 565 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms