RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 CDC42BPGQ6DT37 1551 aa33.29■■■□□ 2.92
LIMD2-204ENST00000578297 PRAM1Q96QH2 718 aa33.28■■■□□ 2.92
LIMD2-204ENST00000578297 C1orf167Q5SNV9 1468 aa33.26■■■□□ 2.92
LIMD2-204ENST00000578297 POGKQ9P215 609 aa33.24■■■□□ 2.91
LIMD2-204ENST00000578297 PHLPP1O60346 1717 aa33.23■■■□□ 2.91
LIMD2-204ENST00000578297 NBPF1Q3BBV0 1214 aa33.23■■■□□ 2.91
LIMD2-204ENST00000578297 AHDC1Q5TGY3 1603 aaPredicted RBP33.21■■■□□ 2.91
LIMD2-204ENST00000578297 SAFB2Q14151 953 aaKnown RBP eCLIP33.2■■■□□ 2.91
LIMD2-204ENST00000578297 TONSLQ96HA7 1378 aa33.2■■■□□ 2.9
LIMD2-204ENST00000578297 ARHGEF28Q8N1W1 1705 aaKnown RBP33.17■■■□□ 2.9
LIMD2-204ENST00000578297 COL16A1Q07092 1604 aaPredicted RBP33.16■■■□□ 2.9
LIMD2-204ENST00000578297 ORAI2Q96SN7 254 aa33.15■■■□□ 2.9
LIMD2-204ENST00000578297 FMN2Q9NZ56 1722 aa33.14■■■□□ 2.9
LIMD2-204ENST00000578297 TRPM1Q7Z4N2 1603 aa33.14■■■□□ 2.9
LIMD2-204ENST00000578297 NHSL1Q5SYE7 1610 aa33.13■■■□□ 2.89
LIMD2-204ENST00000578297 ADGRB2O60241 1585 aa33.13■■■□□ 2.89
LIMD2-204ENST00000578297 CLSPNQ9HAW4 1339 aa33.12■■■□□ 2.89
LIMD2-204ENST00000578297 NBPF8Q3BBV2 869 aa33.11■■■□□ 2.89
LIMD2-204ENST00000578297 NUTM2FA1L443 756 aa33.09■■■□□ 2.89
LIMD2-204ENST00000578297 ESCO1Q5FWF5 840 aa33.09■■■□□ 2.89
LIMD2-204ENST00000578297 MINK1Q8N4C8 1332 aaPredicted RBP33.08■■■□□ 2.89
LIMD2-204ENST00000578297 JCADQ9P266 1359 aa33.08■■■□□ 2.89
LIMD2-204ENST00000578297 HIRIP3Q9BW71 556 aaPredicted RBP33.07■■■□□ 2.88
LIMD2-204ENST00000578297 DDX17Q92841 729 aaKnown RBP33.06■■■□□ 2.88
LIMD2-204ENST00000578297 ROCK2O75116 1388 aaKnown RBP33.06■■■□□ 2.88
LIMD2-204ENST00000578297 MED1Q15648 1581 aaPredicted RBP33.05■■■□□ 2.88
LIMD2-204ENST00000578297 DISP3Q9P2K9 1392 aa33.02■■■□□ 2.88
LIMD2-204ENST00000578297 WASLO00401 505 aaPredicted RBP33.02■■■□□ 2.88
LIMD2-204ENST00000578297 LRRC59Q96AG4 307 aaKnown RBP33.01■■■□□ 2.87
LIMD2-204ENST00000578297 ANKARQ7Z5J8 1434 aa33.01■■■□□ 2.87
LIMD2-204ENST00000578297 GPRASP1Q5JY77 1395 aa33■■■□□ 2.87
LIMD2-204ENST00000578297 SOS2Q07890 1332 aaPredicted RBP33■■■□□ 2.87
LIMD2-204ENST00000578297 EIF3AQ14152 1382 aaKnown RBP32.99■■■□□ 2.87
LIMD2-204ENST00000578297 RGPD8O14715 1765 aaPredicted RBP32.99■■■□□ 2.87
LIMD2-204ENST00000578297 NPHP3Q7Z494 1330 aa32.99■■■□□ 2.87
LIMD2-204ENST00000578297 CENPJQ9HC77 1338 aaPredicted RBP32.99■■■□□ 2.87
LIMD2-204ENST00000578297 SHPRHQ149N8 1683 aa32.97■■■□□ 2.87
LIMD2-204ENST00000578297 USP32Q8NFA0 1604 aa32.97■■■□□ 2.87
LIMD2-204ENST00000578297 KIF1AQ12756 1690 aa32.97■■■□□ 2.87
LIMD2-204ENST00000578297 FOXO3O43524 673 aa32.96■■■□□ 2.87
LIMD2-204ENST00000578297 TIMELESSQ9UNS1 1208 aa32.96■■■□□ 2.87
LIMD2-204ENST00000578297 RALGAPBQ86X10 1494 aa32.96■■■□□ 2.87
LIMD2-204ENST00000578297 TULP4Q9NRJ4 1543 aa32.96■■■□□ 2.87
LIMD2-204ENST00000578297 CCER1Q8TC90 406 aaPredicted RBP32.95■■■□□ 2.87
LIMD2-204ENST00000578297 PHF8Q9UPP1 1060 aa32.94■■■□□ 2.86
LIMD2-204ENST00000578297 SPATA31A6Q5VVP1 1343 aa32.94■■■□□ 2.86
LIMD2-204ENST00000578297 PXDNQ92626 1479 aa32.92■■■□□ 2.86
LIMD2-204ENST00000578297 CDK19Q9BWU1 502 aa32.91■■■□□ 2.86
LIMD2-204ENST00000578297 PRR36Q9H6K5 1346 aa32.91■■■□□ 2.86
LIMD2-204ENST00000578297 CARD11Q9BXL7 1154 aa32.9■■■□□ 2.86
LIMD2-204ENST00000578297 QRICH2Q9H0J4 1663 aa32.9■■■□□ 2.86
LIMD2-204ENST00000578297 PNPLA6Q8IY17 1366 aa32.88■■■□□ 2.85
LIMD2-204ENST00000578297 XPCQ01831 940 aaPredicted RBP32.86■■■□□ 2.85
LIMD2-204ENST00000578297 NUDT16Q96DE0 195 aaKnown RBP32.86■■■□□ 2.85
LIMD2-204ENST00000578297 PMFBP1Q8TBY8 1022 aa32.85■■■□□ 2.85
LIMD2-204ENST00000578297 ATP7BP35670 1465 aa32.85■■■□□ 2.85
LIMD2-204ENST00000578297 KRT28Q7Z3Y7 464 aa32.84■■■□□ 2.85
LIMD2-204ENST00000578297 PHF23Q9BUL5 403 aaPredicted RBP32.83■■■□□ 2.85
LIMD2-204ENST00000578297 LRP6O75581 1613 aa32.81■■■□□ 2.84
LIMD2-204ENST00000578297 ITSN1Q15811 1721 aa32.81■■■□□ 2.84
LIMD2-204ENST00000578297 PSME1Q06323 249 aa32.8■■■□□ 2.84
LIMD2-204ENST00000578297 SRPK2P78362 688 aaKnown RBP32.78■■■□□ 2.84
LIMD2-204ENST00000578297 CCDC61Q9Y6R9 512 aa32.78■■■□□ 2.84
LIMD2-204ENST00000578297 SPATA31A3Q5VYP0 1347 aa32.77■■■□□ 2.84
LIMD2-204ENST00000578297 NUTM2BA6NNL0 878 aaPredicted RBP32.77■■■□□ 2.84
LIMD2-204ENST00000578297 NUTM2EB1AL46 878 aaPredicted RBP32.77■■■□□ 2.84
LIMD2-204ENST00000578297 NUTM2AQ8IVF1 878 aaPredicted RBP32.77■■■□□ 2.84
LIMD2-204ENST00000578297 EVC2Q86UK5 1308 aa32.77■■■□□ 2.84
LIMD2-204ENST00000578297 COL22A1Q8NFW1 1626 aaPredicted RBP32.76■■■□□ 2.83
LIMD2-204ENST00000578297 TOPAZ1Q8N9V7 1692 aa32.75■■■□□ 2.83
LIMD2-204ENST00000578297 SBNO1A3KN83 1393 aa32.75■■■□□ 2.83
LIMD2-204ENST00000578297 SBNO2Q9Y2G9 1366 aa32.75■■■□□ 2.83
LIMD2-204ENST00000578297 CABP2Q9NPB3 220 aa32.75■■■□□ 2.83
LIMD2-204ENST00000578297 NGDNQ8NEJ9 315 aaKnown RBP32.74■■■□□ 2.83
LIMD2-204ENST00000578297 MEX3CQ5U5Q3 659 aaKnown RBP32.73■■■□□ 2.83
LIMD2-204ENST00000578297 PLEKHG3A1L390 1219 aa32.72■■■□□ 2.83
LIMD2-204ENST00000578297 RGS17Q9UGC6 210 aaPredicted RBP32.72■■■□□ 2.83
LIMD2-204ENST00000578297 TNS3Q68CZ2 1445 aa32.71■■■□□ 2.83
LIMD2-204ENST00000578297 POLR3AO14802 1390 aaPredicted RBP32.69■■■□□ 2.82
LIMD2-204ENST00000578297 TRPM3Q9HCF6 1732 aaPredicted RBP32.68■■■□□ 2.82
LIMD2-204ENST00000578297 PPIP5K1Q6PFW1 1433 aa32.67■■■□□ 2.82
LIMD2-204ENST00000578297 ILDR2Q71H61 639 aa32.66■■■□□ 2.82
LIMD2-204ENST00000578297 ACEP12821 1306 aa32.66■■■□□ 2.82
LIMD2-204ENST00000578297 ARHGEF10O15013 1369 aa32.65■■■□□ 2.82
LIMD2-204ENST00000578297 ST20-MTHFSA0A0A6YYL1 179 aa32.63■■■□□ 2.81
LIMD2-204ENST00000578297 ADAMTS2O95450 1211 aa32.61■■■□□ 2.81
LIMD2-204ENST00000578297 LMOD2Q6P5Q4 547 aa32.61■■■□□ 2.81
LIMD2-204ENST00000578297 CABP1Q9NZU7 370 aa32.61■■■□□ 2.81
LIMD2-204ENST00000578297 ALS2Q96Q42 1657 aa32.6■■■□□ 2.81
LIMD2-204ENST00000578297 ATAD2Q6PL18 1390 aa32.59■■■□□ 2.81
LIMD2-204ENST00000578297 USP47Q96K76 1375 aa32.59■■■□□ 2.81
LIMD2-204ENST00000578297 TESK2Q96S53 571 aa32.59■■■□□ 2.81
LIMD2-204ENST00000578297 SLC24A1O60721 1099 aa32.58■■■□□ 2.81
LIMD2-204ENST00000578297 C8orf37Q96NL8 207 aa32.58■■■□□ 2.81
LIMD2-204ENST00000578297 PAK3O75914 559 aaPredicted RBP32.57■■■□□ 2.8
LIMD2-204ENST00000578297 ZNF772Q68DY9 489 aaPredicted RBP32.57■■■□□ 2.8
LIMD2-204ENST00000578297 POTEAQ6S8J7 498 aa32.56■■■□□ 2.8
LIMD2-204ENST00000578297 AFF2P51816 1311 aa32.54■■■□□ 2.8
LIMD2-204ENST00000578297 PUS7Q96PZ0 661 aaKnown RBP32.54■■■□□ 2.8
LIMD2-204ENST00000578297 NGLY1Q96IV0 654 aa32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms