RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 PIK3C2GO75747 1445 aa18.67■□□□□ 0.58
CCDC57-211ENST00000578187 CDC42BPGQ6DT37 1551 aa18.67■□□□□ 0.58
CCDC57-211ENST00000578187 DHX57Q6P158 1386 aaKnown RBP18.66■□□□□ 0.58
CCDC57-211ENST00000578187 DDX17Q92841 729 aaKnown RBP18.65■□□□□ 0.58
CCDC57-211ENST00000578187 STK26Q9P289 416 aa18.65■□□□□ 0.58
CCDC57-211ENST00000578187 KNDC1Q76NI1 1749 aa18.65■□□□□ 0.58
CCDC57-211ENST00000578187 LRPPRCP42704 1394 aaKnown RBP18.65■□□□□ 0.58
CCDC57-211ENST00000578187 PNPLA6Q8IY17 1366 aa18.65■□□□□ 0.58
CCDC57-211ENST00000578187 TECPR2O15040 1411 aa18.64■□□□□ 0.57
CCDC57-211ENST00000578187 ORAI2Q96SN7 254 aa18.63■□□□□ 0.57
CCDC57-211ENST00000578187 RXRBP28702 533 aa18.62■□□□□ 0.57
CCDC57-211ENST00000578187 ESCO1Q5FWF5 840 aa18.62■□□□□ 0.57
CCDC57-211ENST00000578187 ABCC11Q96J66 1382 aa18.62■□□□□ 0.57
CCDC57-211ENST00000578187 AFF2P51816 1311 aa18.61■□□□□ 0.57
CCDC57-211ENST00000578187 SOS2Q07890 1332 aaPredicted RBP18.61■□□□□ 0.57
CCDC57-211ENST00000578187 NPHP3Q7Z494 1330 aa18.61■□□□□ 0.57
CCDC57-211ENST00000578187 C8orf37Q96NL8 207 aa18.61■□□□□ 0.57
CCDC57-211ENST00000578187 YTHDC2Q9H6S0 1430 aaKnown RBP18.6■□□□□ 0.57
CCDC57-211ENST00000578187 TMEM132EQ6IEE7 984 aa18.59■□□□□ 0.57
CCDC57-211ENST00000578187 WAPLQ7Z5K2 1190 aa18.58■□□□□ 0.56
CCDC57-211ENST00000578187 CDK12Q9NYV4 1490 aaPredicted RBP18.57■□□□□ 0.56
CCDC57-211ENST00000578187 ADAMTS2O95450 1211 aa18.56■□□□□ 0.56
CCDC57-211ENST00000578187 NGLY1Q96IV0 654 aa18.56■□□□□ 0.56
CCDC57-211ENST00000578187 C14orf93Q9H972 538 aaKnown RBP18.56■□□□□ 0.56
CCDC57-211ENST00000578187 KIAA1210Q9ULL0 1709 aa18.55■□□□□ 0.56
CCDC57-211ENST00000578187 SIRT1Q96EB6 747 aa18.55■□□□□ 0.56
CCDC57-211ENST00000578187 STAC3Q96MF2 364 aa18.55■□□□□ 0.56
CCDC57-211ENST00000578187 COL22A1Q8NFW1 1626 aaPredicted RBP18.55■□□□□ 0.56
CCDC57-211ENST00000578187 FMN2Q9NZ56 1722 aa18.54■□□□□ 0.56
CCDC57-211ENST00000578187 KIF1AQ12756 1690 aa18.54■□□□□ 0.56
CCDC57-211ENST00000578187 ADGRB1O14514 1584 aa18.54■□□□□ 0.56
CCDC57-211ENST00000578187 NUTM2FA1L443 756 aa18.53■□□□□ 0.56
CCDC57-211ENST00000578187 FOXO3O43524 673 aa18.53■□□□□ 0.56
CCDC57-211ENST00000578187 PPP4R3CPQ6ZMV5 832 aa18.53■□□□□ 0.56
CCDC57-211ENST00000578187 DCAF11Q8TEB1 546 aa18.53■□□□□ 0.56
CCDC57-211ENST00000578187 QTRT2Q9H974 415 aaKnown RBP18.53■□□□□ 0.56
CCDC57-211ENST00000578187 PLEKHH1Q9ULM0 1364 aa18.53■□□□□ 0.56
CCDC57-211ENST00000578187 PXDNQ92626 1479 aa18.52■□□□□ 0.56
CCDC57-211ENST00000578187 RBM6P78332 1123 aaKnown RBP18.52■□□□□ 0.56
CCDC57-211ENST00000578187 CFAP70Q5T0N1 1121 aa18.52■□□□□ 0.56
CCDC57-211ENST00000578187 POGKQ9P215 609 aa18.5■□□□□ 0.55
CCDC57-211ENST00000578187 USP21Q9UK80 565 aa18.5■□□□□ 0.55
CCDC57-211ENST00000578187 XPCQ01831 940 aaPredicted RBP18.49■□□□□ 0.55
CCDC57-211ENST00000578187 SIN3AQ96ST3 1273 aa18.49■□□□□ 0.55
CCDC57-211ENST00000578187 PCGF6Q9BYE7 350 aa18.49■□□□□ 0.55
CCDC57-211ENST00000578187 DLC1Q96QB1 1528 aa18.49■□□□□ 0.55
CCDC57-211ENST00000578187 PRAM1Q96QH2 718 aa18.48■□□□□ 0.55
CCDC57-211ENST00000578187 TRPC5Q9UL62 973 aaPredicted RBP18.48■□□□□ 0.55
CCDC57-211ENST00000578187 KDM2AQ9Y2K7 1162 aa18.48■□□□□ 0.55
CCDC57-211ENST00000578187 PSME1Q06323 249 aa18.46■□□□□ 0.55
CCDC57-211ENST00000578187 SAFB2Q14151 953 aaKnown RBP eCLIP18.46■□□□□ 0.55
CCDC57-211ENST00000578187 UPF1Q92900 1129 aaKnown RBP eCLIP18.46■□□□□ 0.55
CCDC57-211ENST00000578187 ARHGEF28Q8N1W1 1705 aaKnown RBP18.46■□□□□ 0.55
CCDC57-211ENST00000578187 MARF1Q9Y4F3 1742 aaKnown RBP18.46■□□□□ 0.55
CCDC57-211ENST00000578187 FNBP4Q8N3X1 1017 aaPredicted RBP18.45■□□□□ 0.54
CCDC57-211ENST00000578187 PHF8Q9UPP1 1060 aa18.45■□□□□ 0.54
CCDC57-211ENST00000578187 RGS12O14924 1447 aa18.45■□□□□ 0.54
CCDC57-211ENST00000578187 TRPM1Q7Z4N2 1603 aa18.45■□□□□ 0.54
CCDC57-211ENST00000578187 EIF3AQ14152 1382 aaKnown RBP18.44■□□□□ 0.54
CCDC57-211ENST00000578187 HAP1P54257 671 aaPredicted RBP18.44■□□□□ 0.54
CCDC57-211ENST00000578187 KRT28Q7Z3Y7 464 aa18.44■□□□□ 0.54
CCDC57-211ENST00000578187 SPATA31A3Q5VYP0 1347 aa18.43■□□□□ 0.54
CCDC57-211ENST00000578187 ADGRB2O60241 1585 aa18.42■□□□□ 0.54
CCDC57-211ENST00000578187 ANKARQ7Z5J8 1434 aa18.42■□□□□ 0.54
CCDC57-211ENST00000578187 NEUROD1Q13562 356 aa18.42■□□□□ 0.54
CCDC57-211ENST00000578187 L3MBTL2Q969R5 705 aa18.42■□□□□ 0.54
CCDC57-211ENST00000578187 TRAK1Q9UPV9 953 aa18.42■□□□□ 0.54
CCDC57-211ENST00000578187 RGPD8O14715 1765 aaPredicted RBP18.42■□□□□ 0.54
CCDC57-211ENST00000578187 TNS3Q68CZ2 1445 aa18.4■□□□□ 0.54
CCDC57-211ENST00000578187 ATRNO75882 1429 aa18.4■□□□□ 0.54
CCDC57-211ENST00000578187 POTEDQ86YR6 584 aa18.39■□□□□ 0.53
CCDC57-211ENST00000578187 ARHGEF10O15013 1369 aa18.39■□□□□ 0.53
CCDC57-211ENST00000578187 ATAD2Q6PL18 1390 aa18.39■□□□□ 0.53
CCDC57-211ENST00000578187 LMOD2Q6P5Q4 547 aa18.38■□□□□ 0.53
CCDC57-211ENST00000578187 SBNO1A3KN83 1393 aa18.38■□□□□ 0.53
CCDC57-211ENST00000578187 USP32Q8NFA0 1604 aa18.38■□□□□ 0.53
CCDC57-211ENST00000578187 HIRIP3Q9BW71 556 aaPredicted RBP18.37■□□□□ 0.53
CCDC57-211ENST00000578187 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.37■□□□□ 0.53
CCDC57-211ENST00000578187 GPRASP1Q5JY77 1395 aa18.36■□□□□ 0.53
CCDC57-211ENST00000578187 BCL9LQ86UU0 1499 aa18.36■□□□□ 0.53
CCDC57-211ENST00000578187 MINK1Q8N4C8 1332 aaPredicted RBP18.36■□□□□ 0.53
CCDC57-211ENST00000578187 TONSLQ96HA7 1378 aa18.36■□□□□ 0.53
CCDC57-211ENST00000578187 TULP4Q9NRJ4 1543 aa18.35■□□□□ 0.53
CCDC57-211ENST00000578187 CLSPNQ9HAW4 1339 aa18.35■□□□□ 0.53
CCDC57-211ENST00000578187 PMFBP1Q8TBY8 1022 aa18.35■□□□□ 0.53
CCDC57-211ENST00000578187 KCNA4P22459 653 aa18.34■□□□□ 0.53
CCDC57-211ENST00000578187 UNC5CLQ8IV45 518 aa18.34■□□□□ 0.53
CCDC57-211ENST00000578187 WASLO00401 505 aaPredicted RBP18.33■□□□□ 0.52
CCDC57-211ENST00000578187 GJD4Q96KN9 370 aaPredicted RBP18.33■□□□□ 0.52
CCDC57-211ENST00000578187 ITSN1Q15811 1721 aa18.32■□□□□ 0.52
CCDC57-211ENST00000578187 PLEKHG5O94827 1062 aa18.32■□□□□ 0.52
CCDC57-211ENST00000578187 SLIT2O94813 1529 aa18.32■□□□□ 0.52
CCDC57-211ENST00000578187 NBPF1Q3BBV0 1214 aa18.31■□□□□ 0.52
CCDC57-211ENST00000578187 QRICH2Q9H0J4 1663 aa18.31■□□□□ 0.52
CCDC57-211ENST00000578187 ABCA3Q99758 1704 aa18.3■□□□□ 0.52
CCDC57-211ENST00000578187 NGDNQ8NEJ9 315 aaKnown RBP18.3■□□□□ 0.52
CCDC57-211ENST00000578187 RALGAPBQ86X10 1494 aa18.3■□□□□ 0.52
CCDC57-211ENST00000578187 NWD2Q9ULI1 1742 aa18.29■□□□□ 0.52
CCDC57-211ENST00000578187 PLCH1Q4KWH8 1693 aa18.29■□□□□ 0.52
CCDC57-211ENST00000578187 CABLES1Q8TDN4 633 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms