RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 TXNDC2Q86VQ3 553 aa10.83□□□□□ -0.68
SMARCE1-212ENST00000577721 MED1Q15648 1581 aaPredicted RBP10.82□□□□□ -0.68
SMARCE1-212ENST00000577721 HCSTQ9UBK5 93 aa10.82□□□□□ -0.68
SMARCE1-212ENST00000577721 EID1Q9Y6B2 187 aa10.82□□□□□ -0.68
SMARCE1-212ENST00000577721 NEURL4Q96JN8 1562 aa10.82□□□□□ -0.68
SMARCE1-212ENST00000577721 ARSIQ5FYB1 569 aa10.81□□□□□ -0.68
SMARCE1-212ENST00000577721 MICALL2Q8IY33 904 aa10.81□□□□□ -0.68
SMARCE1-212ENST00000577721 MED14O60244 1454 aa10.81□□□□□ -0.68
SMARCE1-212ENST00000577721 ZNF316A6NFI3 1004 aaPredicted RBP10.8□□□□□ -0.68
SMARCE1-212ENST00000577721 VWDEQ8N2E2 1590 aa10.79□□□□□ -0.68
SMARCE1-212ENST00000577721 LTKP29376 864 aa10.79□□□□□ -0.68
SMARCE1-212ENST00000577721 VASPP50552 380 aaPredicted RBP10.79□□□□□ -0.68
SMARCE1-212ENST00000577721 TMEM92Q6UXU6 159 aa10.79□□□□□ -0.68
SMARCE1-212ENST00000577721 RRP7BPQ9NSQ0 103 aa10.79□□□□□ -0.68
SMARCE1-212ENST00000577721 KANK4Q5T7N3 995 aaPredicted RBP10.78□□□□□ -0.68
SMARCE1-212ENST00000577721 EFCAB3Q8N7B9 438 aa10.78□□□□□ -0.68
SMARCE1-212ENST00000577721 LRRC7Q96NW7 1537 aa10.78□□□□□ -0.68
SMARCE1-212ENST00000577721 ERVK-7P63135 1459 aa10.77□□□□□ -0.69
SMARCE1-212ENST00000577721 LOC105371045A0A1W2PR82 267 aa10.77□□□□□ -0.69
SMARCE1-212ENST00000577721 BCANQ96GW7 911 aa10.77□□□□□ -0.69
SMARCE1-212ENST00000577721 CIZ1Q9ULV3 898 aaPredicted RBP10.77□□□□□ -0.69
SMARCE1-212ENST00000577721 POLR1AO95602 1720 aaPredicted RBP10.77□□□□□ -0.69
SMARCE1-212ENST00000577721 ABCC3O15438 1527 aa10.76□□□□□ -0.69
SMARCE1-212ENST00000577721 ARHGEF5Q12774 1597 aa10.76□□□□□ -0.69
SMARCE1-212ENST00000577721 DEPDC5O75140 1603 aa10.76□□□□□ -0.69
SMARCE1-212ENST00000577721 PBX2P40425 430 aa10.75□□□□□ -0.69
SMARCE1-212ENST00000577721 PROSER2Q86WR7 435 aaPredicted RBP10.75□□□□□ -0.69
SMARCE1-212ENST00000577721 LRRC9Q6ZRR7 1453 aa10.74□□□□□ -0.69
SMARCE1-212ENST00000577721 SCAF11Q99590 1463 aaKnown RBP10.74□□□□□ -0.69
SMARCE1-212ENST00000577721 KANK1Q14678 1352 aa10.74□□□□□ -0.69
SMARCE1-212ENST00000577721 MYOM3Q5VTT5 1437 aa10.74□□□□□ -0.69
SMARCE1-212ENST00000577721 IQGAP1P46940 1657 aa10.73□□□□□ -0.69
SMARCE1-212ENST00000577721 RBM33Q96EV2 1170 aaKnown RBP10.73□□□□□ -0.69
SMARCE1-212ENST00000577721 SLC26A8Q96RN1 970 aa10.73□□□□□ -0.69
SMARCE1-212ENST00000577721 RGS17Q9UGC6 210 aaPredicted RBP10.73□□□□□ -0.69
SMARCE1-212ENST00000577721 KIF15Q9NS87 1388 aa10.73□□□□□ -0.69
SMARCE1-212ENST00000577721 KCNA6P17658 529 aa10.72□□□□□ -0.69
SMARCE1-212ENST00000577721 IDI1Q13907 227 aa10.72□□□□□ -0.69
SMARCE1-212ENST00000577721 CHIC2Q9UKJ5 165 aa10.72□□□□□ -0.69
SMARCE1-212ENST00000577721 VPS8Q8N3P4 1428 aa10.72□□□□□ -0.69
SMARCE1-212ENST00000577721 ALKQ9UM73 1620 aa10.72□□□□□ -0.69
SMARCE1-212ENST00000577721 DUOX2Q9NRD8 1548 aa10.71□□□□□ -0.69
SMARCE1-212ENST00000577721 TMEM94Q12767 1356 aa10.7□□□□□ -0.7
SMARCE1-212ENST00000577721 TMEM2Q9UHN6 1383 aa10.7□□□□□ -0.7
SMARCE1-212ENST00000577721 RNF17Q9BXT8 1623 aaKnown RBP10.69□□□□□ -0.7
SMARCE1-212ENST00000577721 MAST1Q9Y2H9 1570 aa10.69□□□□□ -0.7
SMARCE1-212ENST00000577721 ARHGAP31Q2M1Z3 1444 aa10.69□□□□□ -0.7
SMARCE1-212ENST00000577721 FAM135BQ49AJ0 1406 aa10.69□□□□□ -0.7
SMARCE1-212ENST00000577721 POTEAQ6S8J7 498 aa10.69□□□□□ -0.7
SMARCE1-212ENST00000577721 KHSRPQ92945 711 aaKnown RBP eCLIP10.69□□□□□ -0.77e-7■■■□□ 17.5
SMARCE1-212ENST00000577721 ARHGAP23Q9P227 1491 aa10.68□□□□□ -0.7
SMARCE1-212ENST00000577721 ZC3H13Q5T200 1668 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-212ENST00000577721 SLIT1O75093 1534 aa10.68□□□□□ -0.7
SMARCE1-212ENST00000577721 ABCC5O15440 1437 aa10.67□□□□□ -0.7
SMARCE1-212ENST00000577721 STRCP1A6NGW2 1772 aa10.67□□□□□ -0.7
SMARCE1-212ENST00000577721 EIF2AK4Q9P2K8 1649 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-212ENST00000577721 SOX12O15370 315 aa10.67□□□□□ -0.7
SMARCE1-212ENST00000577721 PPP1R15AO75807 674 aaPredicted RBP10.67□□□□□ -0.7
SMARCE1-212ENST00000577721 HDGFP51858 240 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-212ENST00000577721 SPOCK2Q92563 424 aa10.67□□□□□ -0.7
SMARCE1-212ENST00000577721 SYNMO15061 1565 aa10.67□□□□□ -0.7
SMARCE1-212ENST00000577721 ERBINQ96RT1 1412 aa10.67□□□□□ -0.7
SMARCE1-212ENST00000577721 ANKRD30AQ9BXX3 1397 aa10.66□□□□□ -0.7
SMARCE1-212ENST00000577721 C14orf37Q86TY3 774 aa10.66□□□□□ -0.7
SMARCE1-212ENST00000577721 SLC52A1Q9NWF4 448 aa10.66□□□□□ -0.7
SMARCE1-212ENST00000577721 SLAIN2Q9P270 581 aa10.66□□□□□ -0.7
SMARCE1-212ENST00000577721 UBR1Q8IWV7 1749 aa10.66□□□□□ -0.7
SMARCE1-212ENST00000577721 MROH1Q8NDA8 1641 aa10.66□□□□□ -0.7
SMARCE1-212ENST00000577721 CHGAP10645 457 aaKnown RBP10.65□□□□□ -0.7
SMARCE1-212ENST00000577721 MSH6P52701 1360 aa10.65□□□□□ -0.71
SMARCE1-212ENST00000577721 CEP152O94986 1710 aa10.64□□□□□ -0.71
SMARCE1-212ENST00000577721 MAP3K1Q13233 1512 aa10.64□□□□□ -0.71
SMARCE1-212ENST00000577721 FAM50AQ14320 339 aaKnown RBP10.64□□□□□ -0.71
SMARCE1-212ENST00000577721 DAPK1P53355 1430 aa10.64□□□□□ -0.71
SMARCE1-212ENST00000577721 CFAP65Q6ZU64 1925 aaKnown RBP10.64□□□□□ -0.71
SMARCE1-212ENST00000577721 MEX3CQ5U5Q3 659 aaKnown RBP10.63□□□□□ -0.71
SMARCE1-212ENST00000577721 AXIN2Q9Y2T1 843 aa10.63□□□□□ -0.71
SMARCE1-212ENST00000577721 EFCAB6Q5THR3 1501 aa10.63□□□□□ -0.71
SMARCE1-212ENST00000577721 PRDM15P57071 1507 aaPredicted RBP10.62□□□□□ -0.71
SMARCE1-212ENST00000577721 PIK3C2BO00750 1634 aa10.62□□□□□ -0.71
SMARCE1-212ENST00000577721 NUDT7P0C024 238 aa10.6□□□□□ -0.71
SMARCE1-212ENST00000577721 ATF3P18847 181 aa10.6□□□□□ -0.71
SMARCE1-212ENST00000577721 NUTM2DQ5VT03 806 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-212ENST00000577721 ADGRD1Q6QNK2 874 aa10.6□□□□□ -0.71
SMARCE1-212ENST00000577721 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMARCE1-212ENST00000577721 JCADQ9P266 1359 aa10.6□□□□□ -0.71
SMARCE1-212ENST00000577721 FGD6Q6ZV73 1430 aa10.59□□□□□ -0.71
SMARCE1-212ENST00000577721 PTPN23Q9H3S7 1636 aa10.59□□□□□ -0.71
SMARCE1-212ENST00000577721 TBX22Q9Y458 520 aa10.59□□□□□ -0.71
SMARCE1-212ENST00000577721 NOS1P29475 1434 aa10.58□□□□□ -0.72
SMARCE1-212ENST00000577721 CADPS2Q86UW7 1296 aa10.58□□□□□ -0.72
SMARCE1-212ENST00000577721 TRIM52Q96A61 297 aa10.58□□□□□ -0.72
SMARCE1-212ENST00000577721 MS4A4AQ96JQ5 239 aa10.58□□□□□ -0.72
SMARCE1-212ENST00000577721 LMTK2Q8IWU2 1503 aa10.58□□□□□ -0.72
SMARCE1-212ENST00000577721 RIMS2Q9UQ26 1411 aa10.58□□□□□ -0.72
SMARCE1-212ENST00000577721 TET3O43151 1660 aa10.57□□□□□ -0.72
SMARCE1-212ENST00000577721 PLEKHG1Q9ULL1 1385 aa10.57□□□□□ -0.72
SMARCE1-212ENST00000577721 NUTM2BA6NNL0 878 aaPredicted RBP10.57□□□□□ -0.72
SMARCE1-212ENST00000577721 NUTM2EB1AL46 878 aaPredicted RBP10.57□□□□□ -0.72
SMARCE1-212ENST00000577721 ZNF772Q68DY9 489 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms