RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 MST1RQ04912 1400 aa22.54■■□□□ 1.2
NCBP3-207ENST00000577169 TONSLQ96HA7 1378 aa22.53■■□□□ 1.2
NCBP3-207ENST00000577169 KIAA1210Q9ULL0 1709 aa22.53■■□□□ 1.2
NCBP3-207ENST00000577169 NBPF8Q3BBV2 869 aa22.52■■□□□ 1.2
NCBP3-207ENST00000577169 BRINP3Q76B58 766 aa22.52■■□□□ 1.2
NCBP3-207ENST00000577169 DLC1Q96QB1 1528 aa22.52■■□□□ 1.19
NCBP3-207ENST00000577169 C1orf167Q5SNV9 1468 aa22.48■■□□□ 1.19
NCBP3-207ENST00000577169 NUTM2FA1L443 756 aa22.48■■□□□ 1.19
NCBP3-207ENST00000577169 ORAI2Q96SN7 254 aa22.48■■□□□ 1.19
NCBP3-207ENST00000577169 CCER1Q8TC90 406 aaPredicted RBP22.47■■□□□ 1.19
NCBP3-207ENST00000577169 CLSPNQ9HAW4 1339 aa22.47■■□□□ 1.19
NCBP3-207ENST00000577169 MINK1Q8N4C8 1332 aaPredicted RBP22.46■■□□□ 1.19
NCBP3-207ENST00000577169 HIRIP3Q9BW71 556 aaPredicted RBP22.45■■□□□ 1.18
NCBP3-207ENST00000577169 ESCO1Q5FWF5 840 aa22.44■■□□□ 1.18
NCBP3-207ENST00000577169 CDC42BPGQ6DT37 1551 aa22.44■■□□□ 1.18
NCBP3-207ENST00000577169 TRPM1Q7Z4N2 1603 aa22.43■■□□□ 1.18
NCBP3-207ENST00000577169 DDX17Q92841 729 aaKnown RBP22.43■■□□□ 1.18
NCBP3-207ENST00000577169 PHLPP1O60346 1717 aa22.43■■□□□ 1.18
NCBP3-207ENST00000577169 ARHGEF28Q8N1W1 1705 aaKnown RBP22.42■■□□□ 1.18
NCBP3-207ENST00000577169 ROCK2O75116 1388 aaKnown RBP22.41■■□□□ 1.18
NCBP3-207ENST00000577169 FMN2Q9NZ56 1722 aa22.39■■□□□ 1.17
NCBP3-207ENST00000577169 AHDC1Q5TGY3 1603 aaPredicted RBP22.39■■□□□ 1.17
NCBP3-207ENST00000577169 WASLO00401 505 aaPredicted RBP22.38■■□□□ 1.17
NCBP3-207ENST00000577169 TIMELESSQ9UNS1 1208 aa22.37■■□□□ 1.17
NCBP3-207ENST00000577169 CENPJQ9HC77 1338 aaPredicted RBP22.35■■□□□ 1.17
NCBP3-207ENST00000577169 FOXO3O43524 673 aa22.35■■□□□ 1.17
NCBP3-207ENST00000577169 CARD11Q9BXL7 1154 aa22.35■■□□□ 1.17
NCBP3-207ENST00000577169 RGPD8O14715 1765 aaPredicted RBP22.35■■□□□ 1.17
NCBP3-207ENST00000577169 COL16A1Q07092 1604 aaPredicted RBP22.35■■□□□ 1.17
NCBP3-207ENST00000577169 ADGRB2O60241 1585 aa22.34■■□□□ 1.17
NCBP3-207ENST00000577169 CDK19Q9BWU1 502 aa22.34■■□□□ 1.17
NCBP3-207ENST00000577169 NHSL1Q5SYE7 1610 aa22.34■■□□□ 1.17
NCBP3-207ENST00000577169 LRRC59Q96AG4 307 aaKnown RBP22.33■■□□□ 1.17
NCBP3-207ENST00000577169 PHF8Q9UPP1 1060 aa22.33■■□□□ 1.17
NCBP3-207ENST00000577169 GPRASP1Q5JY77 1395 aa22.33■■□□□ 1.17
NCBP3-207ENST00000577169 JCADQ9P266 1359 aa22.33■■□□□ 1.17
NCBP3-207ENST00000577169 SOS2Q07890 1332 aaPredicted RBP22.31■■□□□ 1.16
NCBP3-207ENST00000577169 PRR36Q9H6K5 1346 aa22.31■■□□□ 1.16
NCBP3-207ENST00000577169 RALGAPBQ86X10 1494 aa22.3■■□□□ 1.16
NCBP3-207ENST00000577169 XPCQ01831 940 aaPredicted RBP22.3■■□□□ 1.16
NCBP3-207ENST00000577169 PMFBP1Q8TBY8 1022 aa22.3■■□□□ 1.16
NCBP3-207ENST00000577169 ANKARQ7Z5J8 1434 aa22.3■■□□□ 1.16
NCBP3-207ENST00000577169 NPHP3Q7Z494 1330 aa22.3■■□□□ 1.16
NCBP3-207ENST00000577169 NUDT16Q96DE0 195 aaKnown RBP22.29■■□□□ 1.16
NCBP3-207ENST00000577169 USP32Q8NFA0 1604 aa22.28■■□□□ 1.16
NCBP3-207ENST00000577169 EIF3AQ14152 1382 aaKnown RBP22.28■■□□□ 1.16
NCBP3-207ENST00000577169 DISP3Q9P2K9 1392 aa22.27■■□□□ 1.16
NCBP3-207ENST00000577169 KRT28Q7Z3Y7 464 aa22.27■■□□□ 1.16
NCBP3-207ENST00000577169 TULP4Q9NRJ4 1543 aa22.26■■□□□ 1.15
NCBP3-207ENST00000577169 QRICH2Q9H0J4 1663 aa22.26■■□□□ 1.15
NCBP3-207ENST00000577169 MED1Q15648 1581 aaPredicted RBP22.25■■□□□ 1.15
NCBP3-207ENST00000577169 SRPK2P78362 688 aaKnown RBP22.24■■□□□ 1.15
NCBP3-207ENST00000577169 PSME1Q06323 249 aa22.24■■□□□ 1.15
NCBP3-207ENST00000577169 CABP2Q9NPB3 220 aa22.24■■□□□ 1.15
NCBP3-207ENST00000577169 KIF1AQ12756 1690 aa22.23■■□□□ 1.15
NCBP3-207ENST00000577169 SPATA31A6Q5VVP1 1343 aa22.23■■□□□ 1.15
NCBP3-207ENST00000577169 PXDNQ92626 1479 aa22.22■■□□□ 1.15
NCBP3-207ENST00000577169 NUTM2BA6NNL0 878 aaPredicted RBP22.22■■□□□ 1.15
NCBP3-207ENST00000577169 NUTM2EB1AL46 878 aaPredicted RBP22.22■■□□□ 1.15
NCBP3-207ENST00000577169 NUTM2AQ8IVF1 878 aaPredicted RBP22.22■■□□□ 1.15
NCBP3-207ENST00000577169 CCDC61Q9Y6R9 512 aa22.22■■□□□ 1.15
NCBP3-207ENST00000577169 SHPRHQ149N8 1683 aa22.21■■□□□ 1.15
NCBP3-207ENST00000577169 NGDNQ8NEJ9 315 aaKnown RBP22.21■■□□□ 1.15
NCBP3-207ENST00000577169 EVC2Q86UK5 1308 aa22.21■■□□□ 1.15
NCBP3-207ENST00000577169 PNPLA6Q8IY17 1366 aa22.21■■□□□ 1.15
NCBP3-207ENST00000577169 ATP7BP35670 1465 aa22.19■■□□□ 1.14
NCBP3-207ENST00000577169 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
NCBP3-207ENST00000577169 SPATA31A3Q5VYP0 1347 aa22.17■■□□□ 1.14
NCBP3-207ENST00000577169 ST20-MTHFSA0A0A6YYL1 179 aa22.17■■□□□ 1.14
NCBP3-207ENST00000577169 PLEKHG3A1L390 1219 aa22.17■■□□□ 1.14
NCBP3-207ENST00000577169 ACEP12821 1306 aa22.15■■□□□ 1.14
NCBP3-207ENST00000577169 MEX3CQ5U5Q3 659 aaKnown RBP22.15■■□□□ 1.14
NCBP3-207ENST00000577169 ITSN1Q15811 1721 aa22.14■■□□□ 1.14
NCBP3-207ENST00000577169 LRP6O75581 1613 aa22.14■■□□□ 1.14
NCBP3-207ENST00000577169 LMOD2Q6P5Q4 547 aa22.14■■□□□ 1.13
NCBP3-207ENST00000577169 CABP1Q9NZU7 370 aa22.14■■□□□ 1.13
NCBP3-207ENST00000577169 SBNO1A3KN83 1393 aa22.13■■□□□ 1.13
NCBP3-207ENST00000577169 SBNO2Q9Y2G9 1366 aa22.12■■□□□ 1.13
NCBP3-207ENST00000577169 RGS17Q9UGC6 210 aaPredicted RBP22.12■■□□□ 1.13
NCBP3-207ENST00000577169 PPIP5K1Q6PFW1 1433 aa22.12■■□□□ 1.13
NCBP3-207ENST00000577169 TESK2Q96S53 571 aa22.11■■□□□ 1.13
NCBP3-207ENST00000577169 USP47Q96K76 1375 aa22.11■■□□□ 1.13
NCBP3-207ENST00000577169 TOPAZ1Q8N9V7 1692 aa22.11■■□□□ 1.13
NCBP3-207ENST00000577169 PAK3O75914 559 aaPredicted RBP22.1■■□□□ 1.13
NCBP3-207ENST00000577169 ADAMTS2O95450 1211 aa22.1■■□□□ 1.13
NCBP3-207ENST00000577169 POLR3AO14802 1390 aaPredicted RBP22.1■■□□□ 1.13
NCBP3-207ENST00000577169 TNS3Q68CZ2 1445 aa22.09■■□□□ 1.13
NCBP3-207ENST00000577169 PLEKHG5O94827 1062 aa22.09■■□□□ 1.13
NCBP3-207ENST00000577169 COL22A1Q8NFW1 1626 aaPredicted RBP22.08■■□□□ 1.13
NCBP3-207ENST00000577169 SLC24A1O60721 1099 aa22.07■■□□□ 1.12
NCBP3-207ENST00000577169 ILDR2Q71H61 639 aa22.07■■□□□ 1.12
NCBP3-207ENST00000577169 CABLES1Q8TDN4 633 aa22.07■■□□□ 1.12
NCBP3-207ENST00000577169 TRPM3Q9HCF6 1732 aaPredicted RBP22.06■■□□□ 1.12
NCBP3-207ENST00000577169 ARHGEF10O15013 1369 aa22.05■■□□□ 1.12
NCBP3-207ENST00000577169 ATAD2Q6PL18 1390 aa22.05■■□□□ 1.12
NCBP3-207ENST00000577169 C8orf37Q96NL8 207 aa22.05■■□□□ 1.12
NCBP3-207ENST00000577169 PUS7Q96PZ0 661 aaKnown RBP22.04■■□□□ 1.12
NCBP3-207ENST00000577169 POTEAQ6S8J7 498 aa22.03■■□□□ 1.12
NCBP3-207ENST00000577169 NGLY1Q96IV0 654 aa22.03■■□□□ 1.12
NCBP3-207ENST00000577169 HAP1P54257 671 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms