RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	DUOX2	Q9NRD8	1548 aa		18.93	■□□□□ 0.62
PRPF8-216	ENST00000577001	MYO5C	Q9NQX4	1742 aa		18.93	■□□□□ 0.62
PRPF8-216	ENST00000577001	LNPK	Q9C0E8	428 aa		18.93	■□□□□ 0.62
PRPF8-216	ENST00000577001	ZRANB1	Q9UGI0	708 aa		18.93	■□□□□ 0.62
PRPF8-216	ENST00000577001		E9PCH4	1651 aa		18.92	■□□□□ 0.62
PRPF8-216	ENST00000577001	WAPL	Q7Z5K2	1190 aa		18.92	■□□□□ 0.62
PRPF8-216	ENST00000577001	FANCA	O15360	1455 aa		18.91	■□□□□ 0.62
PRPF8-216	ENST00000577001	RIPK4	P57078	832 aa		18.91	■□□□□ 0.62
PRPF8-216	ENST00000577001	SSH1	Q8WYL5	1049 aa		18.91	■□□□□ 0.62
PRPF8-216	ENST00000577001	PRAM1	Q96QH2	718 aa		18.91	■□□□□ 0.62
PRPF8-216	ENST00000577001	NOB1	Q9ULX3	412 aa	Known RBP	18.91	■□□□□ 0.62
PRPF8-216	ENST00000577001	IDI1	Q13907	227 aa		18.9	■□□□□ 0.62
PRPF8-216	ENST00000577001	TRMT2A	Q8IZ69	625 aa	Known RBP	18.9	■□□□□ 0.62
PRPF8-216	ENST00000577001	USP19	O94966	1318 aa		18.9	■□□□□ 0.62
PRPF8-216	ENST00000577001	ERVK-7	P63135	1459 aa		18.89	■□□□□ 0.61
PRPF8-216	ENST00000577001	MAPK8IP3	Q9UPT6	1336 aa		18.89	■□□□□ 0.61
PRPF8-216	ENST00000577001	MAST1	Q9Y2H9	1570 aa		18.89	■□□□□ 0.61
PRPF8-216	ENST00000577001	DCTN1	Q14203	1278 aa		18.89	■□□□□ 0.61
PRPF8-216	ENST00000577001	OSCAR	Q8IYS5	282 aa		18.89	■□□□□ 0.61
PRPF8-216	ENST00000577001	ADGRL1	O94910	1474 aa		18.88	■□□□□ 0.61
PRPF8-216	ENST00000577001	CABP1	Q9NZU7	370 aa		18.88	■□□□□ 0.61
PRPF8-216	ENST00000577001	CGNL1	Q0VF96	1302 aa		18.88	■□□□□ 0.61
PRPF8-216	ENST00000577001	SLC24A1	O60721	1099 aa		18.87	■□□□□ 0.61
PRPF8-216	ENST00000577001	CLTCL1	P53675	1640 aa		18.87	■□□□□ 0.61
PRPF8-216	ENST00000577001	DZIP1L	Q8IYY4	767 aa	Known RBP	18.86	■□□□□ 0.61
PRPF8-216	ENST00000577001	TMEM57	Q8N5G2	664 aa		18.86	■□□□□ 0.61
PRPF8-216	ENST00000577001	UPF2	Q9HAU5	1272 aa	Known RBP	18.86	■□□□□ 0.61
PRPF8-216	ENST00000577001	TPRN	Q4KMQ1	711 aa		18.85	■□□□□ 0.61
PRPF8-216	ENST00000577001	TRIM27	P14373	513 aa		18.85	■□□□□ 0.61
PRPF8-216	ENST00000577001	ZKSCAN2	Q63HK3	967 aa		18.84	■□□□□ 0.61
PRPF8-216	ENST00000577001	TBC1D2	Q9BYX2	928 aa		18.84	■□□□□ 0.61
PRPF8-216	ENST00000577001	FAM83G	A6ND36	823 aa		18.83	■□□□□ 0.61
PRPF8-216	ENST00000577001	PDE3A	Q14432	1141 aa		18.82	■□□□□ 0.6
PRPF8-216	ENST00000577001	C14orf93	Q9H972	538 aa	Known RBP	18.82	■□□□□ 0.6
PRPF8-216	ENST00000577001	ATAD2	Q6PL18	1390 aa		18.82	■□□□□ 0.6
PRPF8-216	ENST00000577001	TMPO	P42166	694 aa	Known RBP	18.82	■□□□□ 0.6
PRPF8-216	ENST00000577001	RRS1	Q15050	365 aa	Known RBP	18.82	■□□□□ 0.6
PRPF8-216	ENST00000577001	CYB5RL	Q6IPT4	315 aa		18.82	■□□□□ 0.6
PRPF8-216	ENST00000577001	RWDD1	Q9H446	243 aa	Predicted RBP	18.82	■□□□□ 0.6
PRPF8-216	ENST00000577001	USP35	Q9P2H5	1018 aa		18.82	■□□□□ 0.6
PRPF8-216	ENST00000577001	EVC2	Q86UK5	1308 aa		18.81	■□□□□ 0.6
PRPF8-216	ENST00000577001	PRKAR2B	P31323	418 aa		18.81	■□□□□ 0.6
PRPF8-216	ENST00000577001	INSR	P06213	1382 aa		18.8	■□□□□ 0.6
PRPF8-216	ENST00000577001	IQGAP3	Q86VI3	1631 aa		18.8	■□□□□ 0.6
PRPF8-216	ENST00000577001	TSPYL6	Q8N831	410 aa		18.8	■□□□□ 0.6
PRPF8-216	ENST00000577001	KRT24	Q2M2I5	525 aa		18.8	■□□□□ 0.6
PRPF8-216	ENST00000577001	PHACTR3	Q96KR7	559 aa		18.8	■□□□□ 0.6
PRPF8-216	ENST00000577001	MYH16	Q9H6N6	1097 aa		18.8	■□□□□ 0.6
PRPF8-216	ENST00000577001	EMILIN1	Q9Y6C2	1016 aa		18.8	■□□□□ 0.6
PRPF8-216	ENST00000577001	UNC13B	O14795	1591 aa		18.8	■□□□□ 0.6
PRPF8-216	ENST00000577001	PIK3C2G	O75747	1445 aa		18.8	■□□□□ 0.6
PRPF8-216	ENST00000577001	MVP	Q14764	893 aa	Known RBP	18.8	■□□□□ 0.6
PRPF8-216	ENST00000577001	BECN1	Q14457	450 aa		18.79	■□□□□ 0.6
PRPF8-216	ENST00000577001	ANKRD45	Q5TZF3	282 aa		18.79	■□□□□ 0.6
PRPF8-216	ENST00000577001	MADD	Q8WXG6	1647 aa		18.79	■□□□□ 0.6
PRPF8-216	ENST00000577001	ZNF428	Q96B54	188 aa		18.79	■□□□□ 0.6
PRPF8-216	ENST00000577001	RBM42	Q9BTD8	480 aa	Known RBP	18.79	■□□□□ 0.6
PRPF8-216	ENST00000577001	FYB1	O15117	783 aa		18.78	■□□□□ 0.6
PRPF8-216	ENST00000577001	PMFBP1	Q8TBY8	1022 aa		18.78	■□□□□ 0.6
PRPF8-216	ENST00000577001	PTPRT	O14522	1441 aa		18.78	■□□□□ 0.6
PRPF8-216	ENST00000577001	PANK2	Q9BZ23	570 aa		18.77	■□□□□ 0.6
PRPF8-216	ENST00000577001	TRIM35	Q9UPQ4	493 aa		18.77	■□□□□ 0.6
PRPF8-216	ENST00000577001	ABCC1	P33527	1531 aa		18.77	■□□□□ 0.59
PRPF8-216	ENST00000577001	CDK19	Q9BWU1	502 aa		18.76	■□□□□ 0.59
PRPF8-216	ENST00000577001	ASXL2	Q76L83	1435 aa		18.76	■□□□□ 0.59
PRPF8-216	ENST00000577001	HSP90AA1	P07900	732 aa	Known RBP	18.76	■□□□□ 0.59
PRPF8-216	ENST00000577001	MIS18A	Q9NYP9	233 aa		18.76	■□□□□ 0.59
PRPF8-216	ENST00000577001	C22orf23	Q9BZE7	217 aa		18.76	■□□□□ 0.59
PRPF8-216	ENST00000577001	NECTIN2	Q92692	538 aa		18.75	■□□□□ 0.59
PRPF8-216	ENST00000577001	EIF2AK4	Q9P2K8	1649 aa	Known RBP	18.75	■□□□□ 0.59
PRPF8-216	ENST00000577001	VGF	O15240	615 aa	Predicted RBP	18.74	■□□□□ 0.59
PRPF8-216	ENST00000577001	DIAPH1	O60610	1272 aa	Known RBP	18.74	■□□□□ 0.59
PRPF8-216	ENST00000577001	FOXD4L5	Q5VV16	416 aa	Predicted RBP	18.74	■□□□□ 0.59
PRPF8-216	ENST00000577001	TXNDC2	Q86VQ3	553 aa		18.74	■□□□□ 0.59
PRPF8-216	ENST00000577001	NME9	Q86XW9	330 aa		18.74	■□□□□ 0.59
PRPF8-216	ENST00000577001	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	18.74	■□□□□ 0.59
PRPF8-216	ENST00000577001		A0A1W2PP64	1363 aa		18.73	■□□□□ 0.59
PRPF8-216	ENST00000577001	ATP7A	Q04656	1500 aa		18.72	■□□□□ 0.59
PRPF8-216	ENST00000577001	NPAT	Q14207	1427 aa		18.72	■□□□□ 0.59
PRPF8-216	ENST00000577001	ATF7IP	Q6VMQ6	1270 aa		18.71	■□□□□ 0.59
PRPF8-216	ENST00000577001	ZFYVE16	Q7Z3T8	1539 aa		18.71	■□□□□ 0.59
PRPF8-216	ENST00000577001	PLXNC1	O60486	1568 aa		18.71	■□□□□ 0.59
PRPF8-216	ENST00000577001	ZBTB7C	A1YPR0	619 aa		18.71	■□□□□ 0.59
PRPF8-216	ENST00000577001	POLR3A	O14802	1390 aa	Predicted RBP	18.71	■□□□□ 0.59
PRPF8-216	ENST00000577001	SYNM	O15061	1565 aa		18.7	■□□□□ 0.58
PRPF8-216	ENST00000577001	WDR63	Q8IWG1	891 aa		18.7	■□□□□ 0.58
PRPF8-216	ENST00000577001	TRPM2	O94759	1503 aa		18.69	■□□□□ 0.58
PRPF8-216	ENST00000577001	DTNB	O60941	627 aa		18.69	■□□□□ 0.58
PRPF8-216	ENST00000577001	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.69	■□□□□ 0.58
PRPF8-216	ENST00000577001	TBC1D32	Q96NH3	1257 aa		18.69	■□□□□ 0.58
PRPF8-216	ENST00000577001	NOL8	Q76FK4	1167 aa	Known RBP	18.68	■□□□□ 0.58
PRPF8-216	ENST00000577001	ABCA9	Q8IUA7	1624 aa		18.68	■□□□□ 0.58
PRPF8-216	ENST00000577001	CHAMP1	Q96JM3	812 aa		18.68	■□□□□ 0.58
PRPF8-216	ENST00000577001	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	18.67	■□□□□ 0.58
PRPF8-216	ENST00000577001	NUTM2G	Q5VZR2	741 aa		18.67	■□□□□ 0.58
PRPF8-216	ENST00000577001	FOXD4L3	Q6VB84	417 aa	Predicted RBP	18.67	■□□□□ 0.58
PRPF8-216	ENST00000577001	CD109	Q6YHK3	1445 aa		18.67	■□□□□ 0.58
PRPF8-216	ENST00000577001	ABCA6	Q8N139	1617 aa		18.67	■□□□□ 0.58
PRPF8-216	ENST00000577001	SMARCA5	O60264	1052 aa	Predicted RBP	18.66	■□□□□ 0.58
PRPF8-216	ENST00000577001	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	18.66	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms