RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 DISP3Q9P2K9 1392 aa33.85■■■■□ 3.01
SNF8-217ENST00000576353 DLC1Q96QB1 1528 aa33.85■■■■□ 3.01
SNF8-217ENST00000576353 CDC42BPGQ6DT37 1551 aa33.83■■■■□ 3.01
SNF8-217ENST00000576353 PCGF6Q9BYE7 350 aa33.82■■■■□ 3
SNF8-217ENST00000576353 SAFB2Q14151 953 aaKnown RBP eCLIP33.81■■■■□ 3
SNF8-217ENST00000576353 PHLPP1O60346 1717 aa33.81■■■■□ 3
SNF8-217ENST00000576353 AHDC1Q5TGY3 1603 aaPredicted RBP33.8■■■■□ 3
SNF8-217ENST00000576353 ORAI2Q96SN7 254 aa33.79■■■■□ 3
SNF8-217ENST00000576353 JCADQ9P266 1359 aa33.77■■■■□ 3
SNF8-217ENST00000576353 NBPF1Q3BBV0 1214 aa33.75■■■□□ 2.99
SNF8-217ENST00000576353 ESCO1Q5FWF5 840 aa33.75■■■□□ 2.99
SNF8-217ENST00000576353 KIAA1210Q9ULL0 1709 aa33.75■■■□□ 2.99
SNF8-217ENST00000576353 COL16A1Q07092 1604 aaPredicted RBP33.74■■■□□ 2.99
SNF8-217ENST00000576353 NUTM2FA1L443 756 aa33.73■■■□□ 2.99
SNF8-217ENST00000576353 MED1Q15648 1581 aaPredicted RBP33.72■■■□□ 2.99
SNF8-217ENST00000576353 TONSLQ96HA7 1378 aa33.71■■■□□ 2.99
SNF8-217ENST00000576353 DDX17Q92841 729 aaKnown RBP33.7■■■□□ 2.99
SNF8-217ENST00000576353 LRRC59Q96AG4 307 aaKnown RBP33.7■■■□□ 2.99
SNF8-217ENST00000576353 MINK1Q8N4C8 1332 aaPredicted RBP33.68■■■□□ 2.98
SNF8-217ENST00000576353 NHSL1Q5SYE7 1610 aa33.66■■■□□ 2.98
SNF8-217ENST00000576353 HIRIP3Q9BW71 556 aaPredicted RBP33.66■■■□□ 2.98
SNF8-217ENST00000576353 PHF23Q9BUL5 403 aaPredicted RBP33.65■■■□□ 2.98
SNF8-217ENST00000576353 SPATA31A6Q5VVP1 1343 aa33.64■■■□□ 2.98
SNF8-217ENST00000576353 NPHP3Q7Z494 1330 aa33.64■■■□□ 2.98
SNF8-217ENST00000576353 SOS2Q07890 1332 aaPredicted RBP33.63■■■□□ 2.97
SNF8-217ENST00000576353 FMN2Q9NZ56 1722 aa33.63■■■□□ 2.97
SNF8-217ENST00000576353 EIF3AQ14152 1382 aaKnown RBP33.61■■■□□ 2.97
SNF8-217ENST00000576353 ADGRB2O60241 1585 aa33.61■■■□□ 2.97
SNF8-217ENST00000576353 WASLO00401 505 aaPredicted RBP33.61■■■□□ 2.97
SNF8-217ENST00000576353 FOXO3O43524 673 aa33.61■■■□□ 2.97
SNF8-217ENST00000576353 ANKARQ7Z5J8 1434 aa33.59■■■□□ 2.97
SNF8-217ENST00000576353 ROCK2O75116 1388 aaKnown RBP33.59■■■□□ 2.97
SNF8-217ENST00000576353 NBPF8Q3BBV2 869 aa33.58■■■□□ 2.97
SNF8-217ENST00000576353 ARHGEF28Q8N1W1 1705 aaKnown RBP33.58■■■□□ 2.97
SNF8-217ENST00000576353 PHF8Q9UPP1 1060 aa33.57■■■□□ 2.96
SNF8-217ENST00000576353 CLSPNQ9HAW4 1339 aa33.55■■■□□ 2.96
SNF8-217ENST00000576353 CENPJQ9HC77 1338 aaPredicted RBP33.54■■■□□ 2.96
SNF8-217ENST00000576353 SHPRHQ149N8 1683 aa33.54■■■□□ 2.96
SNF8-217ENST00000576353 TRPM1Q7Z4N2 1603 aa33.53■■■□□ 2.96
SNF8-217ENST00000576353 PNPLA6Q8IY17 1366 aa33.51■■■□□ 2.96
SNF8-217ENST00000576353 XPCQ01831 940 aaPredicted RBP33.5■■■□□ 2.95
SNF8-217ENST00000576353 KIF1AQ12756 1690 aa33.49■■■□□ 2.95
SNF8-217ENST00000576353 NUTM2BA6NNL0 878 aaPredicted RBP33.49■■■□□ 2.95
SNF8-217ENST00000576353 NUTM2EB1AL46 878 aaPredicted RBP33.49■■■□□ 2.95
SNF8-217ENST00000576353 NUTM2AQ8IVF1 878 aaPredicted RBP33.49■■■□□ 2.95
SNF8-217ENST00000576353 CDK19Q9BWU1 502 aa33.49■■■□□ 2.95
SNF8-217ENST00000576353 TULP4Q9NRJ4 1543 aa33.48■■■□□ 2.95
SNF8-217ENST00000576353 MEX3CQ5U5Q3 659 aaKnown RBP33.48■■■□□ 2.95
SNF8-217ENST00000576353 KRT28Q7Z3Y7 464 aa33.48■■■□□ 2.95
SNF8-217ENST00000576353 PXDNQ92626 1479 aa33.48■■■□□ 2.95
SNF8-217ENST00000576353 PRR36Q9H6K5 1346 aa33.48■■■□□ 2.95
SNF8-217ENST00000576353 GPRASP1Q5JY77 1395 aa33.47■■■□□ 2.95
SNF8-217ENST00000576353 PSME1Q06323 249 aa33.46■■■□□ 2.95
SNF8-217ENST00000576353 ILDR2Q71H61 639 aa33.46■■■□□ 2.95
SNF8-217ENST00000576353 PMFBP1Q8TBY8 1022 aa33.46■■■□□ 2.95
SNF8-217ENST00000576353 NUDT16Q96DE0 195 aaKnown RBP33.45■■■□□ 2.95
SNF8-217ENST00000576353 LRP6O75581 1613 aa33.44■■■□□ 2.94
SNF8-217ENST00000576353 CARD11Q9BXL7 1154 aa33.44■■■□□ 2.94
SNF8-217ENST00000576353 USP32Q8NFA0 1604 aa33.43■■■□□ 2.94
SNF8-217ENST00000576353 TIMELESSQ9UNS1 1208 aa33.43■■■□□ 2.94
SNF8-217ENST00000576353 CCER1Q8TC90 406 aaPredicted RBP33.41■■■□□ 2.94
SNF8-217ENST00000576353 RGS17Q9UGC6 210 aaPredicted RBP33.41■■■□□ 2.94
SNF8-217ENST00000576353 RGPD8O14715 1765 aaPredicted RBP33.41■■■□□ 2.94
SNF8-217ENST00000576353 RALGAPBQ86X10 1494 aa33.4■■■□□ 2.94
SNF8-217ENST00000576353 SPATA31A3Q5VYP0 1347 aa33.39■■■□□ 2.94
SNF8-217ENST00000576353 SRPK2P78362 688 aaKnown RBP33.38■■■□□ 2.93
SNF8-217ENST00000576353 NGDNQ8NEJ9 315 aaKnown RBP33.38■■■□□ 2.93
SNF8-217ENST00000576353 CCDC61Q9Y6R9 512 aa33.38■■■□□ 2.93
SNF8-217ENST00000576353 ATP7BP35670 1465 aa33.37■■■□□ 2.93
SNF8-217ENST00000576353 SBNO1A3KN83 1393 aa33.35■■■□□ 2.93
SNF8-217ENST00000576353 EVC2Q86UK5 1308 aa33.33■■■□□ 2.93
SNF8-217ENST00000576353 CABP2Q9NPB3 220 aa33.32■■■□□ 2.92
SNF8-217ENST00000576353 QRICH2Q9H0J4 1663 aa33.32■■■□□ 2.92
SNF8-217ENST00000576353 TNS3Q68CZ2 1445 aa33.3■■■□□ 2.92
SNF8-217ENST00000576353 PLEKHG3A1L390 1219 aa33.3■■■□□ 2.92
SNF8-217ENST00000576353 ADAMTS2O95450 1211 aa33.3■■■□□ 2.92
SNF8-217ENST00000576353 ZNF772Q68DY9 489 aaPredicted RBP33.3■■■□□ 2.92
SNF8-217ENST00000576353 COL22A1Q8NFW1 1626 aaPredicted RBP33.29■■■□□ 2.92
SNF8-217ENST00000576353 LMOD2Q6P5Q4 547 aa33.28■■■□□ 2.92
SNF8-217ENST00000576353 C8orf37Q96NL8 207 aa33.28■■■□□ 2.92
SNF8-217ENST00000576353 ARHGEF10O15013 1369 aa33.27■■■□□ 2.92
SNF8-217ENST00000576353 POTEAQ6S8J7 498 aa33.27■■■□□ 2.92
SNF8-217ENST00000576353 ITSN1Q15811 1721 aa33.26■■■□□ 2.92
SNF8-217ENST00000576353 ACEP12821 1306 aa33.25■■■□□ 2.91
SNF8-217ENST00000576353 SBNO2Q9Y2G9 1366 aa33.24■■■□□ 2.91
SNF8-217ENST00000576353 NGLY1Q96IV0 654 aa33.24■■■□□ 2.91
SNF8-217ENST00000576353 POLR3AO14802 1390 aaPredicted RBP33.23■■■□□ 2.91
SNF8-217ENST00000576353 AFF2P51816 1311 aa33.23■■■□□ 2.91
SNF8-217ENST00000576353 PPIP5K1Q6PFW1 1433 aa33.21■■■□□ 2.91
SNF8-217ENST00000576353 PAK3O75914 559 aaPredicted RBP33.21■■■□□ 2.91
SNF8-217ENST00000576353 HAP1P54257 671 aaPredicted RBP33.2■■■□□ 2.91
SNF8-217ENST00000576353 TOPAZ1Q8N9V7 1692 aa33.18■■■□□ 2.9
SNF8-217ENST00000576353 CABP1Q9NZU7 370 aa33.18■■■□□ 2.9
SNF8-217ENST00000576353 SOCS7O14512 581 aa33.16■■■□□ 2.9
SNF8-217ENST00000576353 SLC24A1O60721 1099 aa33.16■■■□□ 2.9
SNF8-217ENST00000576353 CABLES1Q8TDN4 633 aa33.15■■■□□ 2.9
SNF8-217ENST00000576353 TRPM3Q9HCF6 1732 aaPredicted RBP33.14■■■□□ 2.9
SNF8-217ENST00000576353 ATAD2Q6PL18 1390 aa33.14■■■□□ 2.9
SNF8-217ENST00000576353 PLEKHG5O94827 1062 aa33.14■■■□□ 2.9
SNF8-217ENST00000576353 FNBP4Q8N3X1 1017 aaPredicted RBP33.14■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms