RNA–Protein interactions for RNA: ENST00000576106.5

TRAP1-215, Transcript of TNF receptor associated protein 1, human

TSL 4

Gene TRAP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAP1-215	ENST00000576106	KNDC1	Q76NI1	1749 aa		33.11	■■■□□ 2.89
TRAP1-215	ENST00000576106	PRAM1	Q96QH2	718 aa		33.09	■■■□□ 2.89
TRAP1-215	ENST00000576106	ORAI2	Q96SN7	254 aa		33.09	■■■□□ 2.89
TRAP1-215	ENST00000576106	CDC42BPG	Q6DT37	1551 aa		33.09	■■■□□ 2.89
TRAP1-215	ENST00000576106	POGK	Q9P215	609 aa		33.08	■■■□□ 2.89
TRAP1-215	ENST00000576106	ADGRB1	O14514	1584 aa		33.06	■■■□□ 2.88
TRAP1-215	ENST00000576106	LRRC59	Q96AG4	307 aa	Known RBP	33.06	■■■□□ 2.88
TRAP1-215	ENST00000576106	SPATA31A6	Q5VVP1	1343 aa		33.05	■■■□□ 2.88
TRAP1-215	ENST00000576106	TRAK1	Q9UPV9	953 aa		33.05	■■■□□ 2.88
TRAP1-215	ENST00000576106	ESCO1	Q5FWF5	840 aa		33.04	■■■□□ 2.88
TRAP1-215	ENST00000576106	DDX17	Q92841	729 aa	Known RBP	33.04	■■■□□ 2.88
TRAP1-215	ENST00000576106	DLC1	Q96QB1	1528 aa		33.03	■■■□□ 2.88
TRAP1-215	ENST00000576106	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.03	■■■□□ 2.88
TRAP1-215	ENST00000576106	NUTM2F	A1L443	756 aa		33	■■■□□ 2.87
TRAP1-215	ENST00000576106	SIN3A	Q96ST3	1273 aa		33	■■■□□ 2.87
TRAP1-215	ENST00000576106	NHSL1	Q5SYE7	1610 aa		32.98	■■■□□ 2.87
TRAP1-215	ENST00000576106	NEUROD1	Q13562	356 aa		32.97	■■■□□ 2.87
TRAP1-215	ENST00000576106	L3MBTL2	Q969R5	705 aa		32.96	■■■□□ 2.87
TRAP1-215	ENST00000576106	SOS2	Q07890	1332 aa	Predicted RBP	32.96	■■■□□ 2.87
TRAP1-215	ENST00000576106	NPHP3	Q7Z494	1330 aa		32.96	■■■□□ 2.87
TRAP1-215	ENST00000576106	MEX3C	Q5U5Q3	659 aa	Known RBP	32.92	■■■□□ 2.86
TRAP1-215	ENST00000576106	RGS17	Q9UGC6	210 aa	Predicted RBP	32.92	■■■□□ 2.86
TRAP1-215	ENST00000576106	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.9	■■■□□ 2.86
TRAP1-215	ENST00000576106	NUTM2E	B1AL46	878 aa	Predicted RBP	32.9	■■■□□ 2.86
TRAP1-215	ENST00000576106	FOXO3	O43524	673 aa		32.9	■■■□□ 2.86
TRAP1-215	ENST00000576106	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.9	■■■□□ 2.86
TRAP1-215	ENST00000576106	SHPRH	Q149N8	1683 aa		32.9	■■■□□ 2.86
TRAP1-215	ENST00000576106	PNPLA6	Q8IY17	1366 aa		32.89	■■■□□ 2.86
TRAP1-215	ENST00000576106	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.88	■■■□□ 2.85
TRAP1-215	ENST00000576106	SOCS7	O14512	581 aa		32.87	■■■□□ 2.85
TRAP1-215	ENST00000576106	NBPF1	Q3BBV0	1214 aa		32.87	■■■□□ 2.85
TRAP1-215	ENST00000576106	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.87	■■■□□ 2.85
TRAP1-215	ENST00000576106	LRP6	O75581	1613 aa		32.87	■■■□□ 2.85
TRAP1-215	ENST00000576106	FMN2	Q9NZ56	1722 aa		32.85	■■■□□ 2.85
TRAP1-215	ENST00000576106	PHF8	Q9UPP1	1060 aa		32.84	■■■□□ 2.85
TRAP1-215	ENST00000576106	EIF3A	Q14152	1382 aa	Known RBP	32.83	■■■□□ 2.85
TRAP1-215	ENST00000576106	WASL	O00401	505 aa	Predicted RBP	32.82	■■■□□ 2.84
TRAP1-215	ENST00000576106	ANKAR	Q7Z5J8	1434 aa		32.82	■■■□□ 2.84
TRAP1-215	ENST00000576106	KIAA1210	Q9ULL0	1709 aa		32.82	■■■□□ 2.84
TRAP1-215	ENST00000576106	ADGRB2	O60241	1585 aa		32.81	■■■□□ 2.84
TRAP1-215	ENST00000576106	XPC	Q01831	940 aa	Predicted RBP	32.81	■■■□□ 2.84
TRAP1-215	ENST00000576106	PXDN	Q92626	1479 aa		32.8	■■■□□ 2.84
TRAP1-215	ENST00000576106	POTEA	Q6S8J7	498 aa		32.78	■■■□□ 2.84
TRAP1-215	ENST00000576106	ZNF772	Q68DY9	489 aa	Predicted RBP	32.76	■■■□□ 2.83
TRAP1-215	ENST00000576106	KRT28	Q7Z3Y7	464 aa		32.76	■■■□□ 2.83
TRAP1-215	ENST00000576106	PSME1	Q06323	249 aa		32.75	■■■□□ 2.83
TRAP1-215	ENST00000576106	KIF1A	Q12756	1690 aa		32.74	■■■□□ 2.83
TRAP1-215	ENST00000576106	TONSL	Q96HA7	1378 aa		32.71	■■■□□ 2.83
TRAP1-215	ENST00000576106	PMFBP1	Q8TBY8	1022 aa		32.71	■■■□□ 2.83
TRAP1-215	ENST00000576106	PRR36	Q9H6K5	1346 aa		32.71	■■■□□ 2.83
TRAP1-215	ENST00000576106	TULP4	Q9NRJ4	1543 aa		32.71	■■■□□ 2.83
TRAP1-215	ENST00000576106	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.71	■■■□□ 2.83
TRAP1-215	ENST00000576106	C8orf37	Q96NL8	207 aa		32.7	■■■□□ 2.83
TRAP1-215	ENST00000576106	SPATA31A3	Q5VYP0	1347 aa		32.7	■■■□□ 2.82
TRAP1-215	ENST00000576106	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.7	■■■□□ 2.82
TRAP1-215	ENST00000576106	ADAMTS2	O95450	1211 aa		32.69	■■■□□ 2.82
TRAP1-215	ENST00000576106	CDK19	Q9BWU1	502 aa		32.68	■■■□□ 2.82
TRAP1-215	ENST00000576106	ROCK2	O75116	1388 aa	Known RBP	32.68	■■■□□ 2.82
TRAP1-215	ENST00000576106	AFF2	P51816	1311 aa		32.67	■■■□□ 2.82
TRAP1-215	ENST00000576106	NUDT16	Q96DE0	195 aa	Known RBP	32.66	■■■□□ 2.82
TRAP1-215	ENST00000576106	SBNO1	A3KN83	1393 aa		32.64	■■■□□ 2.82
TRAP1-215	ENST00000576106	USP32	Q8NFA0	1604 aa		32.64	■■■□□ 2.82
TRAP1-215	ENST00000576106	NGLY1	Q96IV0	654 aa		32.64	■■■□□ 2.82
TRAP1-215	ENST00000576106	GPRASP1	Q5JY77	1395 aa		32.63	■■■□□ 2.81
TRAP1-215	ENST00000576106	NBPF8	Q3BBV2	869 aa		32.63	■■■□□ 2.81
TRAP1-215	ENST00000576106	NGDN	Q8NEJ9	315 aa	Known RBP	32.63	■■■□□ 2.81
TRAP1-215	ENST00000576106	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.62	■■■□□ 2.81
TRAP1-215	ENST00000576106	TNS3	Q68CZ2	1445 aa		32.61	■■■□□ 2.81
TRAP1-215	ENST00000576106	LMOD2	Q6P5Q4	547 aa		32.59	■■■□□ 2.81
TRAP1-215	ENST00000576106	TRPM1	Q7Z4N2	1603 aa		32.59	■■■□□ 2.81
TRAP1-215	ENST00000576106	ARHGEF10	O15013	1369 aa		32.58	■■■□□ 2.81
TRAP1-215	ENST00000576106	RGPD8	O14715	1765 aa	Predicted RBP	32.58	■■■□□ 2.81
TRAP1-215	ENST00000576106	PCGF6	Q9BYE7	350 aa		32.58	■■■□□ 2.81
TRAP1-215	ENST00000576106	CCDC61	Q9Y6R9	512 aa		32.58	■■■□□ 2.81
TRAP1-215	ENST00000576106	ATP7B	P35670	1465 aa		32.58	■■■□□ 2.81
TRAP1-215	ENST00000576106	SRPK2	P78362	688 aa	Known RBP	32.57	■■■□□ 2.8
TRAP1-215	ENST00000576106	RXRB	P28702	533 aa		32.54	■■■□□ 2.8
TRAP1-215	ENST00000576106	HAP1	P54257	671 aa	Predicted RBP	32.54	■■■□□ 2.8
TRAP1-215	ENST00000576106	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.53	■■■□□ 2.8
TRAP1-215	ENST00000576106	CARD11	Q9BXL7	1154 aa		32.52	■■■□□ 2.8
TRAP1-215	ENST00000576106	QTRT2	Q9H974	415 aa	Known RBP	32.52	■■■□□ 2.8
TRAP1-215	ENST00000576106	PLEKHG3	A1L390	1219 aa		32.51	■■■□□ 2.79
TRAP1-215	ENST00000576106	USP21	Q9UK80	565 aa		32.51	■■■□□ 2.79
TRAP1-215	ENST00000576106	CABP2	Q9NPB3	220 aa		32.5	■■■□□ 2.79
TRAP1-215	ENST00000576106	EVC2	Q86UK5	1308 aa		32.5	■■■□□ 2.79
TRAP1-215	ENST00000576106	PAK3	O75914	559 aa	Predicted RBP	32.48	■■■□□ 2.79
TRAP1-215	ENST00000576106	CABLES1	Q8TDN4	633 aa		32.47	■■■□□ 2.79
TRAP1-215	ENST00000576106	ACE	P12821	1306 aa		32.47	■■■□□ 2.79
TRAP1-215	ENST00000576106	POLR3A	O14802	1390 aa	Predicted RBP	32.46	■■■□□ 2.79
TRAP1-215	ENST00000576106	PLEKHG5	O94827	1062 aa		32.46	■■■□□ 2.79
TRAP1-215	ENST00000576106	RALGAPB	Q86X10	1494 aa		32.46	■■■□□ 2.79
TRAP1-215	ENST00000576106	RBM6	P78332	1123 aa	Known RBP	32.45	■■■□□ 2.79
TRAP1-215	ENST00000576106	CLSPN	Q9HAW4	1339 aa		32.45	■■■□□ 2.78
TRAP1-215	ENST00000576106	TRPC5	Q9UL62	973 aa	Predicted RBP	32.44	■■■□□ 2.78
TRAP1-215	ENST00000576106	ITSN1	Q15811	1721 aa		32.43	■■■□□ 2.78
TRAP1-215	ENST00000576106	QRICH2	Q9H0J4	1663 aa		32.43	■■■□□ 2.78
TRAP1-215	ENST00000576106	PPIP5K1	Q6PFW1	1433 aa		32.42	■■■□□ 2.78
TRAP1-215	ENST00000576106	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.39	■■■□□ 2.78
TRAP1-215	ENST00000576106	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.39	■■■□□ 2.78
TRAP1-215	ENST00000576106	CABP1	Q9NZU7	370 aa		32.38	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms