RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 DLC1Q96QB1 1528 aa29.85■■■□□ 2.37
HCFC1R1-208ENST00000575214 C1orf167Q5SNV9 1468 aa29.84■■■□□ 2.37
HCFC1R1-208ENST00000575214 SAFB2Q14151 953 aaKnown RBP eCLIP29.84■■■□□ 2.37
HCFC1R1-208ENST00000575214 POGKQ9P215 609 aa29.84■■■□□ 2.37
HCFC1R1-208ENST00000575214 CDC42BPGQ6DT37 1551 aa29.84■■■□□ 2.37
HCFC1R1-208ENST00000575214 PHLPP1O60346 1717 aa29.82■■■□□ 2.36
HCFC1R1-208ENST00000575214 AHDC1Q5TGY3 1603 aaPredicted RBP29.79■■■□□ 2.36
HCFC1R1-208ENST00000575214 KIAA1210Q9ULL0 1709 aa29.79■■■□□ 2.36
HCFC1R1-208ENST00000575214 NBPF1Q3BBV0 1214 aa29.77■■■□□ 2.36
HCFC1R1-208ENST00000575214 TONSLQ96HA7 1378 aa29.76■■■□□ 2.35
HCFC1R1-208ENST00000575214 NUTM2FA1L443 756 aa29.76■■■□□ 2.35
HCFC1R1-208ENST00000575214 ORAI2Q96SN7 254 aa29.76■■■□□ 2.35
HCFC1R1-208ENST00000575214 COL16A1Q07092 1604 aaPredicted RBP29.75■■■□□ 2.35
HCFC1R1-208ENST00000575214 MED1Q15648 1581 aaPredicted RBP29.73■■■□□ 2.35
HCFC1R1-208ENST00000575214 ESCO1Q5FWF5 840 aa29.72■■■□□ 2.35
HCFC1R1-208ENST00000575214 DDX17Q92841 729 aaKnown RBP29.72■■■□□ 2.35
HCFC1R1-208ENST00000575214 JCADQ9P266 1359 aa29.72■■■□□ 2.35
HCFC1R1-208ENST00000575214 NHSL1Q5SYE7 1610 aa29.7■■■□□ 2.34
HCFC1R1-208ENST00000575214 MINK1Q8N4C8 1332 aaPredicted RBP29.7■■■□□ 2.34
HCFC1R1-208ENST00000575214 HIRIP3Q9BW71 556 aaPredicted RBP29.69■■■□□ 2.34
HCFC1R1-208ENST00000575214 FMN2Q9NZ56 1722 aa29.69■■■□□ 2.34
HCFC1R1-208ENST00000575214 ARHGEF28Q8N1W1 1705 aaKnown RBP29.68■■■□□ 2.34
HCFC1R1-208ENST00000575214 ILDR2Q71H61 639 aa29.68■■■□□ 2.34
HCFC1R1-208ENST00000575214 ADGRB2O60241 1585 aa29.66■■■□□ 2.34
HCFC1R1-208ENST00000575214 TRPM1Q7Z4N2 1603 aa29.64■■■□□ 2.34
HCFC1R1-208ENST00000575214 ROCK2O75116 1388 aaKnown RBP29.64■■■□□ 2.34
HCFC1R1-208ENST00000575214 NBPF8Q3BBV2 869 aa29.63■■■□□ 2.33
HCFC1R1-208ENST00000575214 LRRC59Q96AG4 307 aaKnown RBP29.62■■■□□ 2.33
HCFC1R1-208ENST00000575214 PHF23Q9BUL5 403 aaPredicted RBP29.61■■■□□ 2.33
HCFC1R1-208ENST00000575214 NPHP3Q7Z494 1330 aa29.61■■■□□ 2.33
HCFC1R1-208ENST00000575214 WASLO00401 505 aaPredicted RBP29.59■■■□□ 2.33
HCFC1R1-208ENST00000575214 FOXO3O43524 673 aa29.59■■■□□ 2.33
HCFC1R1-208ENST00000575214 SOS2Q07890 1332 aaPredicted RBP29.59■■■□□ 2.33
HCFC1R1-208ENST00000575214 EIF3AQ14152 1382 aaKnown RBP29.59■■■□□ 2.33
HCFC1R1-208ENST00000575214 ANKARQ7Z5J8 1434 aa29.58■■■□□ 2.33
HCFC1R1-208ENST00000575214 SPATA31A6Q5VVP1 1343 aa29.57■■■□□ 2.32
HCFC1R1-208ENST00000575214 CENPJQ9HC77 1338 aaPredicted RBP29.57■■■□□ 2.32
HCFC1R1-208ENST00000575214 SHPRHQ149N8 1683 aa29.57■■■□□ 2.32
HCFC1R1-208ENST00000575214 PHF8Q9UPP1 1060 aa29.56■■■□□ 2.32
HCFC1R1-208ENST00000575214 CLSPNQ9HAW4 1339 aa29.56■■■□□ 2.32
HCFC1R1-208ENST00000575214 KIF1AQ12756 1690 aa29.55■■■□□ 2.32
HCFC1R1-208ENST00000575214 TULP4Q9NRJ4 1543 aa29.55■■■□□ 2.32
HCFC1R1-208ENST00000575214 XPCQ01831 940 aaPredicted RBP29.54■■■□□ 2.32
HCFC1R1-208ENST00000575214 USP32Q8NFA0 1604 aa29.52■■■□□ 2.32
HCFC1R1-208ENST00000575214 RGPD8O14715 1765 aaPredicted RBP29.52■■■□□ 2.32
HCFC1R1-208ENST00000575214 PNPLA6Q8IY17 1366 aa29.52■■■□□ 2.32
HCFC1R1-208ENST00000575214 PRR36Q9H6K5 1346 aa29.52■■■□□ 2.32
HCFC1R1-208ENST00000575214 PXDNQ92626 1479 aa29.51■■■□□ 2.32
HCFC1R1-208ENST00000575214 GPRASP1Q5JY77 1395 aa29.51■■■□□ 2.31
HCFC1R1-208ENST00000575214 CCER1Q8TC90 406 aaPredicted RBP29.51■■■□□ 2.31
HCFC1R1-208ENST00000575214 RALGAPBQ86X10 1494 aa29.5■■■□□ 2.31
HCFC1R1-208ENST00000575214 NUTM2BA6NNL0 878 aaPredicted RBP29.5■■■□□ 2.31
HCFC1R1-208ENST00000575214 NUTM2EB1AL46 878 aaPredicted RBP29.5■■■□□ 2.31
HCFC1R1-208ENST00000575214 NUTM2AQ8IVF1 878 aaPredicted RBP29.5■■■□□ 2.31
HCFC1R1-208ENST00000575214 PMFBP1Q8TBY8 1022 aa29.5■■■□□ 2.31
HCFC1R1-208ENST00000575214 CDK19Q9BWU1 502 aa29.5■■■□□ 2.31
HCFC1R1-208ENST00000575214 CARD11Q9BXL7 1154 aa29.49■■■□□ 2.31
HCFC1R1-208ENST00000575214 LRP6O75581 1613 aa29.48■■■□□ 2.31
HCFC1R1-208ENST00000575214 MEX3CQ5U5Q3 659 aaKnown RBP29.48■■■□□ 2.31
HCFC1R1-208ENST00000575214 KRT28Q7Z3Y7 464 aa29.46■■■□□ 2.31
HCFC1R1-208ENST00000575214 QRICH2Q9H0J4 1663 aa29.45■■■□□ 2.31
HCFC1R1-208ENST00000575214 NUDT16Q96DE0 195 aaKnown RBP29.45■■■□□ 2.31
HCFC1R1-208ENST00000575214 ATP7BP35670 1465 aa29.45■■■□□ 2.3
HCFC1R1-208ENST00000575214 SOCS7O14512 581 aa29.44■■■□□ 2.3
HCFC1R1-208ENST00000575214 PSME1Q06323 249 aa29.43■■■□□ 2.3
HCFC1R1-208ENST00000575214 SRPK2P78362 688 aaKnown RBP29.41■■■□□ 2.3
HCFC1R1-208ENST00000575214 TIMELESSQ9UNS1 1208 aa29.4■■■□□ 2.3
HCFC1R1-208ENST00000575214 NGDNQ8NEJ9 315 aaKnown RBP29.39■■■□□ 2.3
HCFC1R1-208ENST00000575214 RGS17Q9UGC6 210 aaPredicted RBP29.39■■■□□ 2.29
HCFC1R1-208ENST00000575214 SPATA31A3Q5VYP0 1347 aa29.38■■■□□ 2.29
HCFC1R1-208ENST00000575214 CABP2Q9NPB3 220 aa29.38■■■□□ 2.29
HCFC1R1-208ENST00000575214 ITSN1Q15811 1721 aa29.38■■■□□ 2.29
HCFC1R1-208ENST00000575214 CCDC61Q9Y6R9 512 aa29.37■■■□□ 2.29
HCFC1R1-208ENST00000575214 EVC2Q86UK5 1308 aa29.37■■■□□ 2.29
HCFC1R1-208ENST00000575214 TNS3Q68CZ2 1445 aa29.36■■■□□ 2.29
HCFC1R1-208ENST00000575214 SBNO1A3KN83 1393 aa29.35■■■□□ 2.29
HCFC1R1-208ENST00000575214 COL22A1Q8NFW1 1626 aaPredicted RBP29.35■■■□□ 2.29
HCFC1R1-208ENST00000575214 LMOD2Q6P5Q4 547 aa29.34■■■□□ 2.29
HCFC1R1-208ENST00000575214 ADAMTS2O95450 1211 aa29.33■■■□□ 2.29
HCFC1R1-208ENST00000575214 TOPAZ1Q8N9V7 1692 aa29.32■■■□□ 2.28
HCFC1R1-208ENST00000575214 C8orf37Q96NL8 207 aa29.3■■■□□ 2.28
HCFC1R1-208ENST00000575214 PPIP5K1Q6PFW1 1433 aa29.3■■■□□ 2.28
HCFC1R1-208ENST00000575214 ARHGEF10O15013 1369 aa29.29■■■□□ 2.28
HCFC1R1-208ENST00000575214 SBNO2Q9Y2G9 1366 aa29.29■■■□□ 2.28
HCFC1R1-208ENST00000575214 ACEP12821 1306 aa29.28■■■□□ 2.28
HCFC1R1-208ENST00000575214 PLEKHG3A1L390 1219 aa29.28■■■□□ 2.28
HCFC1R1-208ENST00000575214 POLR3AO14802 1390 aaPredicted RBP29.27■■■□□ 2.28
HCFC1R1-208ENST00000575214 PAK3O75914 559 aaPredicted RBP29.26■■■□□ 2.28
HCFC1R1-208ENST00000575214 PLEKHG5O94827 1062 aa29.26■■■□□ 2.28
HCFC1R1-208ENST00000575214 POTEAQ6S8J7 498 aa29.26■■■□□ 2.28
HCFC1R1-208ENST00000575214 TRPM3Q9HCF6 1732 aaPredicted RBP29.26■■■□□ 2.27
HCFC1R1-208ENST00000575214 AFF2P51816 1311 aa29.26■■■□□ 2.27
HCFC1R1-208ENST00000575214 ZNF772Q68DY9 489 aaPredicted RBP29.26■■■□□ 2.27
HCFC1R1-208ENST00000575214 HAP1P54257 671 aaPredicted RBP29.24■■■□□ 2.27
HCFC1R1-208ENST00000575214 NGLY1Q96IV0 654 aa29.24■■■□□ 2.27
HCFC1R1-208ENST00000575214 CABP1Q9NZU7 370 aa29.24■■■□□ 2.27
HCFC1R1-208ENST00000575214 ST20-MTHFSA0A0A6YYL1 179 aa29.22■■■□□ 2.27
HCFC1R1-208ENST00000575214 CABLES1Q8TDN4 633 aa29.21■■■□□ 2.27
HCFC1R1-208ENST00000575214 ATAD2Q6PL18 1390 aa29.21■■■□□ 2.27
HCFC1R1-208ENST00000575214 USP47Q96K76 1375 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms