RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 C14orf93Q9H972 538 aaKnown RBP15.54■□□□□ 0.08
LITAF-216ENST00000574848 RGS17Q9UGC6 210 aaPredicted RBP15.54■□□□□ 0.08
LITAF-216ENST00000574848 SIRT1Q96EB6 747 aa15.52■□□□□ 0.08
LITAF-216ENST00000574848 ADGRB2O60241 1585 aa15.51■□□□□ 0.07
LITAF-216ENST00000574848 PLEKHH1Q9ULM0 1364 aa15.5■□□□□ 0.07
LITAF-216ENST00000574848 TMEM132EQ6IEE7 984 aa15.5■□□□□ 0.07
LITAF-216ENST00000574848 STAC3Q96MF2 364 aa15.5■□□□□ 0.07
LITAF-216ENST00000574848 KIF1AQ12756 1690 aa15.49■□□□□ 0.07
LITAF-216ENST00000574848 COL22A1Q8NFW1 1626 aaPredicted RBP15.49■□□□□ 0.07
LITAF-216ENST00000574848 DHX57Q6P158 1386 aaKnown RBP15.49■□□□□ 0.07
LITAF-216ENST00000574848 PNPLA6Q8IY17 1366 aa15.49■□□□□ 0.07
LITAF-216ENST00000574848 CFAP70Q5T0N1 1121 aa15.48■□□□□ 0.07
LITAF-216ENST00000574848 SOS2Q07890 1332 aaPredicted RBP15.47■□□□□ 0.07
LITAF-216ENST00000574848 LRRC59Q96AG4 307 aaKnown RBP15.47■□□□□ 0.07
LITAF-216ENST00000574848 STK26Q9P289 416 aa15.47■□□□□ 0.07
LITAF-216ENST00000574848 KIAA1210Q9ULL0 1709 aa15.47■□□□□ 0.07
LITAF-216ENST00000574848 PXDNQ92626 1479 aa15.46■□□□□ 0.07
LITAF-216ENST00000574848 WAPLQ7Z5K2 1190 aa15.46■□□□□ 0.07
LITAF-216ENST00000574848 ORAI2Q96SN7 254 aa15.46■□□□□ 0.07
LITAF-216ENST00000574848 ZEB1P37275 1124 aaPredicted RBP15.45■□□□□ 0.06
LITAF-216ENST00000574848 ARHGEF28Q8N1W1 1705 aaKnown RBP15.44■□□□□ 0.06
LITAF-216ENST00000574848 POTEAQ6S8J7 498 aa15.44■□□□□ 0.06
LITAF-216ENST00000574848 DDX17Q92841 729 aaKnown RBP15.44■□□□□ 0.06
LITAF-216ENST00000574848 USP32Q8NFA0 1604 aa15.43■□□□□ 0.06
LITAF-216ENST00000574848 NPHP3Q7Z494 1330 aa15.43■□□□□ 0.06
LITAF-216ENST00000574848 DCAF11Q8TEB1 546 aa15.42■□□□□ 0.06
LITAF-216ENST00000574848 ANKARQ7Z5J8 1434 aa15.42■□□□□ 0.06
LITAF-216ENST00000574848 RGPD8O14715 1765 aaPredicted RBP15.41■□□□□ 0.06
LITAF-216ENST00000574848 PRAM1Q96QH2 718 aa15.4■□□□□ 0.06
LITAF-216ENST00000574848 ESCO1Q5FWF5 840 aa15.39■□□□□ 0.05
LITAF-216ENST00000574848 TULP4Q9NRJ4 1543 aa15.38■□□□□ 0.05
LITAF-216ENST00000574848 MARF1Q9Y4F3 1742 aaKnown RBP15.38■□□□□ 0.05
LITAF-216ENST00000574848 MEX3CQ5U5Q3 659 aaKnown RBP15.38■□□□□ 0.05
LITAF-216ENST00000574848 ZNF772Q68DY9 489 aaPredicted RBP15.38■□□□□ 0.05
LITAF-216ENST00000574848 KDM2AQ9Y2K7 1162 aa15.37■□□□□ 0.05
LITAF-216ENST00000574848 CDK12Q9NYV4 1490 aaPredicted RBP15.37■□□□□ 0.05
LITAF-216ENST00000574848 EIF3AQ14152 1382 aaKnown RBP15.36■□□□□ 0.05
LITAF-216ENST00000574848 NUTM2BA6NNL0 878 aaPredicted RBP15.35■□□□□ 0.05
LITAF-216ENST00000574848 NUTM2EB1AL46 878 aaPredicted RBP15.35■□□□□ 0.05
LITAF-216ENST00000574848 NUTM2AQ8IVF1 878 aaPredicted RBP15.35■□□□□ 0.05
LITAF-216ENST00000574848 ITSN1Q15811 1721 aa15.34■□□□□ 0.05
LITAF-216ENST00000574848 FOXO3O43524 673 aa15.34■□□□□ 0.05
LITAF-216ENST00000574848 POGKQ9P215 609 aa15.34■□□□□ 0.05
LITAF-216ENST00000574848 TRAK1Q9UPV9 953 aa15.34■□□□□ 0.05
LITAF-216ENST00000574848 AFF2P51816 1311 aa15.34■□□□□ 0.05
LITAF-216ENST00000574848 ABCA3Q99758 1704 aa15.34■□□□□ 0.05
LITAF-216ENST00000574848 TRPM3Q9HCF6 1732 aaPredicted RBP15.34■□□□□ 0.05
LITAF-216ENST00000574848 NUTM2FA1L443 756 aa15.33■□□□□ 0.04
LITAF-216ENST00000574848 TNS3Q68CZ2 1445 aa15.33■□□□□ 0.04
LITAF-216ENST00000574848 TOPAZ1Q8N9V7 1692 aa15.32■□□□□ 0.04
LITAF-216ENST00000574848 SAFB2Q14151 953 aaKnown RBP eCLIP15.32■□□□□ 0.04
LITAF-216ENST00000574848 PHF8Q9UPP1 1060 aa15.32■□□□□ 0.04
LITAF-216ENST00000574848 SPATA31A3Q5VYP0 1347 aa15.32■□□□□ 0.04
LITAF-216ENST00000574848 SBNO1A3KN83 1393 aa15.32■□□□□ 0.04
LITAF-216ENST00000574848 ATP7BP35670 1465 aa15.32■□□□□ 0.04
LITAF-216ENST00000574848 TRPM1Q7Z4N2 1603 aa15.32■□□□□ 0.04
LITAF-216ENST00000574848 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.31■□□□□ 0.04
LITAF-216ENST00000574848 ALS2Q96Q42 1657 aa15.31■□□□□ 0.04
LITAF-216ENST00000574848 C8orf37Q96NL8 207 aa15.3■□□□□ 0.04
LITAF-216ENST00000574848 MINK1Q8N4C8 1332 aaPredicted RBP15.29■□□□□ 0.04
LITAF-216ENST00000574848 PRR36Q9H6K5 1346 aa15.29■□□□□ 0.04
LITAF-216ENST00000574848 WASLO00401 505 aaPredicted RBP15.29■□□□□ 0.04
LITAF-216ENST00000574848 XPCQ01831 940 aaPredicted RBP15.29■□□□□ 0.04
LITAF-216ENST00000574848 FNBP4Q8N3X1 1017 aaPredicted RBP15.28■□□□□ 0.04
LITAF-216ENST00000574848 CRYBG1Q9Y4K1 1723 aa15.28■□□□□ 0.04
LITAF-216ENST00000574848 ARHGEF10O15013 1369 aa15.27■□□□□ 0.04
LITAF-216ENST00000574848 ADAMTS2O95450 1211 aa15.27■□□□□ 0.04
LITAF-216ENST00000574848 KRT28Q7Z3Y7 464 aa15.27■□□□□ 0.04
LITAF-216ENST00000574848 HIRIP3Q9BW71 556 aaPredicted RBP15.27■□□□□ 0.04
LITAF-216ENST00000574848 QRICH2Q9H0J4 1663 aa15.27■□□□□ 0.03
LITAF-216ENST00000574848 RGS12O14924 1447 aa15.26■□□□□ 0.03
LITAF-216ENST00000574848 ATRNO75882 1429 aa15.26■□□□□ 0.03
LITAF-216ENST00000574848 RXRBP28702 533 aa15.26■□□□□ 0.03
LITAF-216ENST00000574848 PSME1Q06323 249 aa15.26■□□□□ 0.03
LITAF-216ENST00000574848 BCL9LQ86UU0 1499 aa15.26■□□□□ 0.03
LITAF-216ENST00000574848 NBPF1Q3BBV0 1214 aa15.25■□□□□ 0.03
LITAF-216ENST00000574848 CCER1Q8TC90 406 aaPredicted RBP15.25■□□□□ 0.03
LITAF-216ENST00000574848 L3MBTL2Q969R5 705 aa15.25■□□□□ 0.03
LITAF-216ENST00000574848 NGLY1Q96IV0 654 aa15.25■□□□□ 0.03
LITAF-216ENST00000574848 SLIT2O94813 1529 aa15.25■□□□□ 0.03
LITAF-216ENST00000574848 NWD2Q9ULI1 1742 aa15.25■□□□□ 0.03
LITAF-216ENST00000574848 PLCH1Q4KWH8 1693 aa15.24■□□□□ 0.03
LITAF-216ENST00000574848 RBM6P78332 1123 aaKnown RBP15.23■□□□□ 0.03
LITAF-216ENST00000574848 SIN3AQ96ST3 1273 aa15.23■□□□□ 0.03
LITAF-216ENST00000574848 PMFBP1Q8TBY8 1022 aa15.22■□□□□ 0.03
LITAF-216ENST00000574848 QTRT2Q9H974 415 aaKnown RBP15.22■□□□□ 0.03
LITAF-216ENST00000574848 USP21Q9UK80 565 aa15.22■□□□□ 0.03
LITAF-216ENST00000574848 POLR3AO14802 1390 aaPredicted RBP15.22■□□□□ 0.03
LITAF-216ENST00000574848 GPRASP1Q5JY77 1395 aa15.22■□□□□ 0.03
LITAF-216ENST00000574848 TRPC5Q9UL62 973 aaPredicted RBP15.21■□□□□ 0.03
LITAF-216ENST00000574848 CENPJQ9HC77 1338 aaPredicted RBP15.2■□□□□ 0.02
LITAF-216ENST00000574848 NRAPQ86VF7 1730 aa15.2■□□□□ 0.02
LITAF-216ENST00000574848 PHRF1Q9P1Y6 1649 aaKnown RBP15.19■□□□□ 0.02
LITAF-216ENST00000574848 NUDT16Q96DE0 195 aaKnown RBP15.19■□□□□ 0.02
LITAF-216ENST00000574848 GLI3P10071 1580 aa15.19■□□□□ 0.02
LITAF-216ENST00000574848 CDK19Q9BWU1 502 aa15.18■□□□□ 0.02
LITAF-216ENST00000574848 COL14A1Q05707 1796 aaKnown RBP15.18■□□□□ 0.02
LITAF-216ENST00000574848 RALGAPBQ86X10 1494 aa15.17■□□□□ 0.02
LITAF-216ENST00000574848 ROCK2O75116 1388 aaKnown RBP15.17■□□□□ 0.02
LITAF-216ENST00000574848 PLEKHG3A1L390 1219 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms