RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 LRRC59Q96AG4 307 aaKnown RBP24.11■■□□□ 1.45
TVP23B-207ENST00000574294 CFAP70Q5T0N1 1121 aa24.07■■□□□ 1.44
TVP23B-207ENST00000574294 WAPLQ7Z5K2 1190 aa24.05■■□□□ 1.44
TVP23B-207ENST00000574294 DCAF11Q8TEB1 546 aa24.05■■□□□ 1.44
TVP23B-207ENST00000574294 RGS17Q9UGC6 210 aaPredicted RBP24.05■■□□□ 1.44
TVP23B-207ENST00000574294 DLC1Q96QB1 1528 aa24.02■■□□□ 1.44
TVP23B-207ENST00000574294 ORAI2Q96SN7 254 aa24.02■■□□□ 1.44
TVP23B-207ENST00000574294 MEX3CQ5U5Q3 659 aaKnown RBP24.01■■□□□ 1.43
TVP23B-207ENST00000574294 KDM2AQ9Y2K7 1162 aa24.01■■□□□ 1.43
TVP23B-207ENST00000574294 SOS2Q07890 1332 aaPredicted RBP24.01■■□□□ 1.43
TVP23B-207ENST00000574294 NPHP3Q7Z494 1330 aa24■■□□□ 1.43
TVP23B-207ENST00000574294 ESCO1Q5FWF5 840 aa23.99■■□□□ 1.43
TVP23B-207ENST00000574294 PLEKHH1Q9ULM0 1364 aa23.99■■□□□ 1.43
TVP23B-207ENST00000574294 ADGRB1O14514 1584 aa23.98■■□□□ 1.43
TVP23B-207ENST00000574294 LRP6O75581 1613 aa23.98■■□□□ 1.43
TVP23B-207ENST00000574294 FMN2Q9NZ56 1722 aa23.97■■□□□ 1.43
TVP23B-207ENST00000574294 PNPLA6Q8IY17 1366 aa23.96■■□□□ 1.43
TVP23B-207ENST00000574294 ZNF772Q68DY9 489 aaPredicted RBP23.96■■□□□ 1.43
TVP23B-207ENST00000574294 DDX17Q92841 729 aaKnown RBP23.96■■□□□ 1.43
TVP23B-207ENST00000574294 PRAM1Q96QH2 718 aa23.96■■□□□ 1.43
TVP23B-207ENST00000574294 POGKQ9P215 609 aa23.96■■□□□ 1.43
TVP23B-207ENST00000574294 POTEAQ6S8J7 498 aa23.93■■□□□ 1.42
TVP23B-207ENST00000574294 KIF1AQ12756 1690 aa23.92■■□□□ 1.42
TVP23B-207ENST00000574294 NUTM2BA6NNL0 878 aaPredicted RBP23.92■■□□□ 1.42
TVP23B-207ENST00000574294 NUTM2EB1AL46 878 aaPredicted RBP23.92■■□□□ 1.42
TVP23B-207ENST00000574294 NUTM2AQ8IVF1 878 aaPredicted RBP23.92■■□□□ 1.42
TVP23B-207ENST00000574294 TRAK1Q9UPV9 953 aa23.9■■□□□ 1.42
TVP23B-207ENST00000574294 ADGRB2O60241 1585 aa23.9■■□□□ 1.42
TVP23B-207ENST00000574294 KIAA1210Q9ULL0 1709 aa23.9■■□□□ 1.42
TVP23B-207ENST00000574294 FOXO3O43524 673 aa23.89■■□□□ 1.41
TVP23B-207ENST00000574294 EIF3AQ14152 1382 aaKnown RBP23.89■■□□□ 1.41
TVP23B-207ENST00000574294 PXDNQ92626 1479 aa23.88■■□□□ 1.41
TVP23B-207ENST00000574294 NUTM2FA1L443 756 aa23.88■■□□□ 1.41
TVP23B-207ENST00000574294 ANKARQ7Z5J8 1434 aa23.87■■□□□ 1.41
TVP23B-207ENST00000574294 SAFB2Q14151 953 aaKnown RBP eCLIP23.87■■□□□ 1.41
TVP23B-207ENST00000574294 COL22A1Q8NFW1 1626 aaPredicted RBP23.87■■□□□ 1.41
TVP23B-207ENST00000574294 PHF8Q9UPP1 1060 aa23.84■■□□□ 1.41
TVP23B-207ENST00000574294 PSME1Q06323 249 aa23.83■■□□□ 1.41
TVP23B-207ENST00000574294 RGPD8O14715 1765 aaPredicted RBP23.83■■□□□ 1.4
TVP23B-207ENST00000574294 AFF2P51816 1311 aa23.82■■□□□ 1.4
TVP23B-207ENST00000574294 ARHGEF28Q8N1W1 1705 aaKnown RBP23.81■■□□□ 1.4
TVP23B-207ENST00000574294 C8orf37Q96NL8 207 aa23.81■■□□□ 1.4
TVP23B-207ENST00000574294 KRT28Q7Z3Y7 464 aa23.8■■□□□ 1.4
TVP23B-207ENST00000574294 WASLO00401 505 aaPredicted RBP23.79■■□□□ 1.4
TVP23B-207ENST00000574294 NGLY1Q96IV0 654 aa23.79■■□□□ 1.4
TVP23B-207ENST00000574294 SPATA31A3Q5VYP0 1347 aa23.79■■□□□ 1.4
TVP23B-207ENST00000574294 MINK1Q8N4C8 1332 aaPredicted RBP23.79■■□□□ 1.4
TVP23B-207ENST00000574294 RXRBP28702 533 aa23.78■■□□□ 1.4
TVP23B-207ENST00000574294 XPCQ01831 940 aaPredicted RBP23.78■■□□□ 1.4
TVP23B-207ENST00000574294 TULP4Q9NRJ4 1543 aa23.78■■□□□ 1.4
TVP23B-207ENST00000574294 ADAMTS2O95450 1211 aa23.77■■□□□ 1.4
TVP23B-207ENST00000574294 TRIM26Q12899 539 aaPredicted RBP23.76■■□□□ 1.39
TVP23B-207ENST00000574294 HIRIP3Q9BW71 556 aaPredicted RBP23.76■■□□□ 1.39
TVP23B-207ENST00000574294 USP32Q8NFA0 1604 aa23.76■■□□□ 1.39
TVP23B-207ENST00000574294 SBNO1A3KN83 1393 aa23.76■■□□□ 1.39
TVP23B-207ENST00000574294 CDK12Q9NYV4 1490 aaPredicted RBP23.75■■□□□ 1.39
TVP23B-207ENST00000574294 L3MBTL2Q969R5 705 aa23.75■■□□□ 1.39
TVP23B-207ENST00000574294 TNS3Q68CZ2 1445 aa23.74■■□□□ 1.39
TVP23B-207ENST00000574294 FNBP4Q8N3X1 1017 aaPredicted RBP23.73■■□□□ 1.39
TVP23B-207ENST00000574294 QTRT2Q9H974 415 aaKnown RBP23.73■■□□□ 1.39
TVP23B-207ENST00000574294 ARHGEF10O15013 1369 aa23.73■■□□□ 1.39
TVP23B-207ENST00000574294 MARF1Q9Y4F3 1742 aaKnown RBP23.73■■□□□ 1.39
TVP23B-207ENST00000574294 GPRASP1Q5JY77 1395 aa23.72■■□□□ 1.39
TVP23B-207ENST00000574294 ITSN1Q15811 1721 aa23.72■■□□□ 1.39
TVP23B-207ENST00000574294 RBM6P78332 1123 aaKnown RBP23.71■■□□□ 1.39
TVP23B-207ENST00000574294 NBPF1Q3BBV0 1214 aa23.71■■□□□ 1.39
TVP23B-207ENST00000574294 SIN3AQ96ST3 1273 aa23.71■■□□□ 1.39
TVP23B-207ENST00000574294 USP21Q9UK80 565 aa23.7■■□□□ 1.38
TVP23B-207ENST00000574294 NEUROD1Q13562 356 aa23.69■■□□□ 1.38
TVP23B-207ENST00000574294 PMFBP1Q8TBY8 1022 aa23.69■■□□□ 1.38
TVP23B-207ENST00000574294 PRR36Q9H6K5 1346 aa23.68■■□□□ 1.38
TVP23B-207ENST00000574294 TRPC5Q9UL62 973 aaPredicted RBP23.68■■□□□ 1.38
TVP23B-207ENST00000574294 CENPJQ9HC77 1338 aaPredicted RBP23.66■■□□□ 1.38
TVP23B-207ENST00000574294 HAP1P54257 671 aaPredicted RBP23.66■■□□□ 1.38
TVP23B-207ENST00000574294 NGDNQ8NEJ9 315 aaKnown RBP23.66■■□□□ 1.38
TVP23B-207ENST00000574294 NUDT16Q96DE0 195 aaKnown RBP23.66■■□□□ 1.38
TVP23B-207ENST00000574294 CDK19Q9BWU1 502 aa23.66■■□□□ 1.38
TVP23B-207ENST00000574294 ATP7BP35670 1465 aa23.65■■□□□ 1.38
TVP23B-207ENST00000574294 TRPM1Q7Z4N2 1603 aa23.64■■□□□ 1.38
TVP23B-207ENST00000574294 LMOD2Q6P5Q4 547 aa23.64■■□□□ 1.37
TVP23B-207ENST00000574294 TRPM3Q9HCF6 1732 aaPredicted RBP23.63■■□□□ 1.37
TVP23B-207ENST00000574294 CCDC61Q9Y6R9 512 aa23.63■■□□□ 1.37
TVP23B-207ENST00000574294 ATRNO75882 1429 aa23.61■■□□□ 1.37
TVP23B-207ENST00000574294 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.61■■□□□ 1.37
TVP23B-207ENST00000574294 ROCK2O75116 1388 aaKnown RBP23.6■■□□□ 1.37
TVP23B-207ENST00000574294 BCL9LQ86UU0 1499 aa23.6■■□□□ 1.37
TVP23B-207ENST00000574294 ALS2Q96Q42 1657 aa23.6■■□□□ 1.37
TVP23B-207ENST00000574294 TOPAZ1Q8N9V7 1692 aa23.58■■□□□ 1.37
TVP23B-207ENST00000574294 QRICH2Q9H0J4 1663 aa23.58■■□□□ 1.37
TVP23B-207ENST00000574294 POLR3AO14802 1390 aaPredicted RBP23.58■■□□□ 1.37
TVP23B-207ENST00000574294 PLEKHG3A1L390 1219 aa23.58■■□□□ 1.37
TVP23B-207ENST00000574294 SLIT2O94813 1529 aa23.58■■□□□ 1.36
TVP23B-207ENST00000574294 TONSLQ96HA7 1378 aa23.57■■□□□ 1.36
TVP23B-207ENST00000574294 ABCA3Q99758 1704 aa23.57■■□□□ 1.36
TVP23B-207ENST00000574294 UNC5CLQ8IV45 518 aa23.57■■□□□ 1.36
TVP23B-207ENST00000574294 SRPK2P78362 688 aaKnown RBP23.56■■□□□ 1.36
TVP23B-207ENST00000574294 RGS12O14924 1447 aa23.56■■□□□ 1.36
TVP23B-207ENST00000574294 PAK3O75914 559 aaPredicted RBP23.55■■□□□ 1.36
TVP23B-207ENST00000574294 CABLES1Q8TDN4 633 aa23.55■■□□□ 1.36
TVP23B-207ENST00000574294 NWD2Q9ULI1 1742 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms