RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 PLEKHH1Q9ULM0 1364 aa38.18■■■■□ 3.7
NPLOC4-215ENST00000574095 KDM2AQ9Y2K7 1162 aa38.15■■■■□ 3.7
NPLOC4-215ENST00000574095 LRP6O75581 1613 aa38.15■■■■□ 3.7
NPLOC4-215ENST00000574095 LAMC1P11047 1609 aa38.15■■■■□ 3.7
NPLOC4-215ENST00000574095 LRRC59Q96AG4 307 aaKnown RBP38.14■■■■□ 3.7
NPLOC4-215ENST00000574095 DCAF11Q8TEB1 546 aa38.13■■■■□ 3.69
NPLOC4-215ENST00000574095 DHX57Q6P158 1386 aaKnown RBP38.13■■■■□ 3.69
NPLOC4-215ENST00000574095 CDC42BPGQ6DT37 1551 aa38.13■■■■□ 3.69
NPLOC4-215ENST00000574095 POTEAQ6S8J7 498 aa38.12■■■■□ 3.69
NPLOC4-215ENST00000574095 NUTM2BA6NNL0 878 aaPredicted RBP38.09■■■■□ 3.69
NPLOC4-215ENST00000574095 NUTM2EB1AL46 878 aaPredicted RBP38.09■■■■□ 3.69
NPLOC4-215ENST00000574095 MEX3CQ5U5Q3 659 aaKnown RBP38.09■■■■□ 3.69
NPLOC4-215ENST00000574095 NUTM2AQ8IVF1 878 aaPredicted RBP38.09■■■■□ 3.69
NPLOC4-215ENST00000574095 SIRT1Q96EB6 747 aa38.08■■■■□ 3.69
NPLOC4-215ENST00000574095 NUTM2FA1L443 756 aa38.07■■■■□ 3.68
NPLOC4-215ENST00000574095 ESCO1Q5FWF5 840 aa38.06■■■■□ 3.68
NPLOC4-215ENST00000574095 SOS2Q07890 1332 aaPredicted RBP38.02■■■■□ 3.68
NPLOC4-215ENST00000574095 PNPLA6Q8IY17 1366 aa38.01■■■■□ 3.68
NPLOC4-215ENST00000574095 PRAM1Q96QH2 718 aa38■■■■□ 3.67
NPLOC4-215ENST00000574095 SAFB2Q14151 953 aaKnown RBP eCLIP37.99■■■■□ 3.67
NPLOC4-215ENST00000574095 STAC3Q96MF2 364 aa37.99■■■■□ 3.67
NPLOC4-215ENST00000574095 FMN2Q9NZ56 1722 aa37.98■■■■□ 3.67
NPLOC4-215ENST00000574095 ADGRB1O14514 1584 aa37.97■■■■□ 3.67
NPLOC4-215ENST00000574095 TRAK1Q9UPV9 953 aa37.95■■■■□ 3.67
NPLOC4-215ENST00000574095 POGKQ9P215 609 aa37.94■■■■□ 3.66
NPLOC4-215ENST00000574095 NPHP3Q7Z494 1330 aa37.93■■■■□ 3.66
NPLOC4-215ENST00000574095 DLC1Q96QB1 1528 aa37.93■■■■□ 3.66
NPLOC4-215ENST00000574095 FOXO3O43524 673 aa37.93■■■■□ 3.66
NPLOC4-215ENST00000574095 XPCQ01831 940 aaPredicted RBP37.9■■■■□ 3.66
NPLOC4-215ENST00000574095 ZNF772Q68DY9 489 aaPredicted RBP37.89■■■■□ 3.66
NPLOC4-215ENST00000574095 RGPD8O14715 1765 aaPredicted RBP37.88■■■■□ 3.66
NPLOC4-215ENST00000574095 PXDNQ92626 1479 aa37.86■■■■□ 3.65
NPLOC4-215ENST00000574095 C8orf37Q96NL8 207 aa37.83■■■■□ 3.65
NPLOC4-215ENST00000574095 AFF2P51816 1311 aa37.83■■■■□ 3.65
NPLOC4-215ENST00000574095 ADAMTS2O95450 1211 aa37.82■■■■□ 3.64
NPLOC4-215ENST00000574095 KIF1AQ12756 1690 aa37.8■■■■□ 3.64
NPLOC4-215ENST00000574095 HIRIP3Q9BW71 556 aaPredicted RBP37.8■■■■□ 3.64
NPLOC4-215ENST00000574095 MINK1Q8N4C8 1332 aaPredicted RBP37.79■■■■□ 3.64
NPLOC4-215ENST00000574095 PHF8Q9UPP1 1060 aa37.78■■■■□ 3.64
NPLOC4-215ENST00000574095 COL22A1Q8NFW1 1626 aaPredicted RBP37.77■■■■□ 3.64
NPLOC4-215ENST00000574095 ADGRB2O60241 1585 aa37.76■■■■□ 3.63
NPLOC4-215ENST00000574095 KRT28Q7Z3Y7 464 aa37.75■■■■□ 3.63
NPLOC4-215ENST00000574095 NGLY1Q96IV0 654 aa37.73■■■■□ 3.63
NPLOC4-215ENST00000574095 SIN3AQ96ST3 1273 aa37.73■■■■□ 3.63
NPLOC4-215ENST00000574095 USP32Q8NFA0 1604 aa37.72■■■■□ 3.63
NPLOC4-215ENST00000574095 ARHGEF28Q8N1W1 1705 aaKnown RBP37.72■■■■□ 3.63
NPLOC4-215ENST00000574095 KIAA1210Q9ULL0 1709 aa37.7■■■■□ 3.63
NPLOC4-215ENST00000574095 RXRBP28702 533 aa37.7■■■■□ 3.63
NPLOC4-215ENST00000574095 PMFBP1Q8TBY8 1022 aa37.69■■■■□ 3.62
NPLOC4-215ENST00000574095 ANKARQ7Z5J8 1434 aa37.69■■■■□ 3.62
NPLOC4-215ENST00000574095 SPATA31A3Q5VYP0 1347 aa37.68■■■■□ 3.62
NPLOC4-215ENST00000574095 NBPF1Q3BBV0 1214 aa37.68■■■■□ 3.62
NPLOC4-215ENST00000574095 WASLO00401 505 aaPredicted RBP37.67■■■■□ 3.62
NPLOC4-215ENST00000574095 QTRT2Q9H974 415 aaKnown RBP37.66■■■■□ 3.62
NPLOC4-215ENST00000574095 L3MBTL2Q969R5 705 aa37.65■■■■□ 3.62
NPLOC4-215ENST00000574095 PSME1Q06323 249 aa37.64■■■■□ 3.62
NPLOC4-215ENST00000574095 NEUROD1Q13562 356 aa37.64■■■■□ 3.62
NPLOC4-215ENST00000574095 PRR36Q9H6K5 1346 aa37.63■■■■□ 3.62
NPLOC4-215ENST00000574095 EIF3AQ14152 1382 aaKnown RBP37.61■■■■□ 3.61
NPLOC4-215ENST00000574095 TULP4Q9NRJ4 1543 aa37.61■■■■□ 3.61
NPLOC4-215ENST00000574095 USP21Q9UK80 565 aa37.59■■■■□ 3.61
NPLOC4-215ENST00000574095 MARF1Q9Y4F3 1742 aaKnown RBP37.58■■■■□ 3.61
NPLOC4-215ENST00000574095 TNS3Q68CZ2 1445 aa37.57■■■■□ 3.6
NPLOC4-215ENST00000574095 FNBP4Q8N3X1 1017 aaPredicted RBP37.57■■■■□ 3.6
NPLOC4-215ENST00000574095 SBNO1A3KN83 1393 aa37.55■■■■□ 3.6
NPLOC4-215ENST00000574095 RBM6P78332 1123 aaKnown RBP37.55■■■■□ 3.6
NPLOC4-215ENST00000574095 LMOD2Q6P5Q4 547 aa37.55■■■■□ 3.6
NPLOC4-215ENST00000574095 PLEKHG5O94827 1062 aa37.54■■■■□ 3.6
NPLOC4-215ENST00000574095 CDK19Q9BWU1 502 aa37.52■■■■□ 3.6
NPLOC4-215ENST00000574095 CDK12Q9NYV4 1490 aaPredicted RBP37.52■■■■□ 3.6
NPLOC4-215ENST00000574095 CABLES1Q8TDN4 633 aa37.51■■■■□ 3.6
NPLOC4-215ENST00000574095 NUDT16Q96DE0 195 aaKnown RBP37.51■■■■□ 3.6
NPLOC4-215ENST00000574095 TRIM26Q12899 539 aaPredicted RBP37.5■■■■□ 3.59
NPLOC4-215ENST00000574095 TRPC5Q9UL62 973 aaPredicted RBP37.49■■■■□ 3.59
NPLOC4-215ENST00000574095 NGDNQ8NEJ9 315 aaKnown RBP37.48■■■■□ 3.59
NPLOC4-215ENST00000574095 ATP7BP35670 1465 aa37.47■■■■□ 3.59
NPLOC4-215ENST00000574095 GPRASP1Q5JY77 1395 aa37.47■■■■□ 3.59
NPLOC4-215ENST00000574095 HAP1P54257 671 aaPredicted RBP37.47■■■■□ 3.59
NPLOC4-215ENST00000574095 TRPM3Q9HCF6 1732 aaPredicted RBP37.47■■■■□ 3.59
NPLOC4-215ENST00000574095 ARHGEF10O15013 1369 aa37.46■■■■□ 3.59
NPLOC4-215ENST00000574095 ITSN1Q15811 1721 aa37.45■■■■□ 3.59
NPLOC4-215ENST00000574095 BCL9LQ86UU0 1499 aa37.45■■■■□ 3.59
NPLOC4-215ENST00000574095 RGS12O14924 1447 aa37.44■■■■□ 3.58
NPLOC4-215ENST00000574095 ATRNO75882 1429 aa37.43■■■■□ 3.58
NPLOC4-215ENST00000574095 CENPJQ9HC77 1338 aaPredicted RBP37.42■■■■□ 3.58
NPLOC4-215ENST00000574095 TRPM1Q7Z4N2 1603 aa37.42■■■■□ 3.58
NPLOC4-215ENST00000574095 ABCA3Q99758 1704 aa37.39■■■■□ 3.58
NPLOC4-215ENST00000574095 ALS2Q96Q42 1657 aa37.38■■■■□ 3.57
NPLOC4-215ENST00000574095 PAK3O75914 559 aaPredicted RBP37.37■■■■□ 3.57
NPLOC4-215ENST00000574095 UPF1Q92900 1129 aaKnown RBP eCLIP37.36■■■■□ 3.57
NPLOC4-215ENST00000574095 CCDC61Q9Y6R9 512 aa37.36■■■■□ 3.57
NPLOC4-215ENST00000574095 QRICH2Q9H0J4 1663 aa37.36■■■■□ 3.57
NPLOC4-215ENST00000574095 SLIT2O94813 1529 aa37.36■■■■□ 3.57
NPLOC4-215ENST00000574095 UNC5CLQ8IV45 518 aa37.34■■■■□ 3.57
NPLOC4-215ENST00000574095 TOPAZ1Q8N9V7 1692 aa37.34■■■■□ 3.57
NPLOC4-215ENST00000574095 ROCK2O75116 1388 aaKnown RBP37.33■■■■□ 3.57
NPLOC4-215ENST00000574095 SRPK2P78362 688 aaKnown RBP37.33■■■■□ 3.57
NPLOC4-215ENST00000574095 NBPF8Q3BBV2 869 aa37.33■■■■□ 3.57
NPLOC4-215ENST00000574095 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.32■■■■□ 3.56
NPLOC4-215ENST00000574095 GJD4Q96KN9 370 aaPredicted RBP37.31■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms