RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 ZMYM3Q14202 1370 aa12.01□□□□□ -0.49
TVP23A-205ENST00000572428 RBM25P49756 843 aaKnown RBP12□□□□□ -0.49
TVP23A-205ENST00000572428 UBR1Q8IWV7 1749 aa12□□□□□ -0.49
TVP23A-205ENST00000572428 L3MBTL2Q969R5 705 aa12□□□□□ -0.49
TVP23A-205ENST00000572428 NEXMIFQ5QGS0 1516 aa11.99□□□□□ -0.49
TVP23A-205ENST00000572428 ZNF142P52746 1687 aaPredicted RBP11.99□□□□□ -0.49
TVP23A-205ENST00000572428 GRIPAP1Q4V328 841 aa11.99□□□□□ -0.49
TVP23A-205ENST00000572428 MSH5O43196 834 aa11.98□□□□□ -0.49
TVP23A-205ENST00000572428 PLCD4Q9BRC7 762 aa11.98□□□□□ -0.49
TVP23A-205ENST00000572428 BRPF1P55201 1214 aaPredicted RBP11.98□□□□□ -0.49
TVP23A-205ENST00000572428 SLC52A1Q9NWF4 448 aa11.98□□□□□ -0.49
TVP23A-205ENST00000572428 MTMR7Q9Y216 660 aa11.98□□□□□ -0.49
TVP23A-205ENST00000572428 MYO3AQ8NEV4 1616 aa11.97□□□□□ -0.49
TVP23A-205ENST00000572428 POLR1AO95602 1720 aaPredicted RBP11.97□□□□□ -0.49
TVP23A-205ENST00000572428 RALGAPBQ86X10 1494 aa11.97□□□□□ -0.49
TVP23A-205ENST00000572428 RAD21O60216 631 aa11.97□□□□□ -0.49
TVP23A-205ENST00000572428 PRAG1Q86YV5 1406 aa11.97□□□□□ -0.49
TVP23A-205ENST00000572428 ZFYVE9O95405 1425 aa11.95□□□□□ -0.5
TVP23A-205ENST00000572428 NLRP1Q9C000 1473 aa11.95□□□□□ -0.5
TVP23A-205ENST00000572428 CANXP27824 592 aaKnown RBP11.94□□□□□ -0.5
TVP23A-205ENST00000572428 MIER1Q8N108 512 aa11.94□□□□□ -0.5
TVP23A-205ENST00000572428 ARID4BQ4LE39 1312 aaPredicted RBP11.94□□□□□ -0.5
TVP23A-205ENST00000572428 RPGRIP1LQ68CZ1 1315 aa11.94□□□□□ -0.5
TVP23A-205ENST00000572428 ZBTB7CA1YPR0 619 aa11.94□□□□□ -0.5
TVP23A-205ENST00000572428 IQGAP1P46940 1657 aa11.94□□□□□ -0.5
TVP23A-205ENST00000572428 SETD1BQ9UPS6 1966 aaKnown RBP11.94□□□□□ -0.5
TVP23A-205ENST00000572428 SETBP1Q9Y6X0 1596 aa11.94□□□□□ -0.5
TVP23A-205ENST00000572428 SETD1AO15047 1707 aaKnown RBP11.93□□□□□ -0.5
TVP23A-205ENST00000572428 A2ML1A8K2U0 1454 aa11.93□□□□□ -0.5
TVP23A-205ENST00000572428 PLCD3Q8N3E9 789 aa11.93□□□□□ -0.5
TVP23A-205ENST00000572428 KCTD17Q8N5Z5 321 aa11.92□□□□□ -0.5
TVP23A-205ENST00000572428 GPRASP1Q5JY77 1395 aa11.92□□□□□ -0.5
TVP23A-205ENST00000572428 NBPF8Q3BBV2 869 aa11.92□□□□□ -0.5
TVP23A-205ENST00000572428 USP35Q9P2H5 1018 aa11.92□□□□□ -0.5
TVP23A-205ENST00000572428 MLECQ14165 292 aa11.92□□□□□ -0.5
TVP23A-205ENST00000572428 IDI1Q13907 227 aa11.91□□□□□ -0.5
TVP23A-205ENST00000572428 FBXO31Q5XUX0 539 aaPredicted RBP11.91□□□□□ -0.5
TVP23A-205ENST00000572428 TNRQ92752 1358 aa11.91□□□□□ -0.5
TVP23A-205ENST00000572428 PIK3C2GO75747 1445 aa11.9□□□□□ -0.5
TVP23A-205ENST00000572428 ESF1Q9H501 851 aaKnown RBP11.9□□□□□ -0.5
TVP23A-205ENST00000572428 SLIT1O75093 1534 aa11.9□□□□□ -0.5
TVP23A-205ENST00000572428 FAM177A1Q8N128 213 aaPredicted RBP11.89□□□□□ -0.51
TVP23A-205ENST00000572428 NRXN3Q9Y4C0 1643 aa11.89□□□□□ -0.51
TVP23A-205ENST00000572428 DCAF11Q8TEB1 546 aa11.89□□□□□ -0.51
TVP23A-205ENST00000572428 PRDM4Q9UKN5 801 aa11.89□□□□□ -0.51
TVP23A-205ENST00000572428 CEP170BQ9Y4F5 1589 aaPredicted RBP11.88□□□□□ -0.51
TVP23A-205ENST00000572428 ARHGAP23Q9P227 1491 aa11.88□□□□□ -0.51
TVP23A-205ENST00000572428 PTPRMP28827 1452 aa11.87□□□□□ -0.51
TVP23A-205ENST00000572428 PATL2C9JE40 543 aaKnown RBP11.87□□□□□ -0.51
TVP23A-205ENST00000572428 ADGRB1O14514 1584 aa11.87□□□□□ -0.51
TVP23A-205ENST00000572428 FAM193AP78312 1265 aa11.87□□□□□ -0.51
TVP23A-205ENST00000572428 CC2D2BQ6DHV5 1058 aa11.85□□□□□ -0.51
TVP23A-205ENST00000572428 ZNF830Q96NB3 372 aaPredicted RBP11.85□□□□□ -0.51
TVP23A-205ENST00000572428 RGL3Q3MIN7 710 aa11.85□□□□□ -0.51
TVP23A-205ENST00000572428 OS9Q13438 667 aaPredicted RBP11.84□□□□□ -0.51
TVP23A-205ENST00000572428 KNDC1Q76NI1 1749 aa11.84□□□□□ -0.51
TVP23A-205ENST00000572428 ARHGEF28Q8N1W1 1705 aaKnown RBP11.83□□□□□ -0.52
TVP23A-205ENST00000572428 ALKQ9UM73 1620 aa11.83□□□□□ -0.52
TVP23A-205ENST00000572428 KDM4AO75164 1064 aa11.83□□□□□ -0.52
TVP23A-205ENST00000572428 CNGB1Q14028 1251 aaPredicted RBP11.83□□□□□ -0.52
TVP23A-205ENST00000572428 RIMS2Q9UQ26 1411 aa11.83□□□□□ -0.52
TVP23A-205ENST00000572428 SOX12O15370 315 aa11.82□□□□□ -0.52
TVP23A-205ENST00000572428 ADGRF5Q8IZF2 1346 aa11.82□□□□□ -0.52
TVP23A-205ENST00000572428 ASXL1Q8IXJ9 1541 aa11.82□□□□□ -0.52
TVP23A-205ENST00000572428 TMEM2Q9UHN6 1383 aa11.82□□□□□ -0.52
TVP23A-205ENST00000572428 DIP2AQ14689 1571 aa11.81□□□□□ -0.52
TVP23A-205ENST00000572428 VGFO15240 615 aaPredicted RBP11.81□□□□□ -0.52
TVP23A-205ENST00000572428 CEBPAP49715 358 aaPredicted RBP11.81□□□□□ -0.52
TVP23A-205ENST00000572428 RGS22Q8NE09 1264 aa11.81□□□□□ -0.52
TVP23A-205ENST00000572428 HIRIP3Q9BW71 556 aaPredicted RBP11.81□□□□□ -0.52
TVP23A-205ENST00000572428 PPM1GO15355 546 aaPredicted RBP11.8□□□□□ -0.52
TVP23A-205ENST00000572428 ANAPC15P60006 121 aa11.8□□□□□ -0.52
TVP23A-205ENST00000572428 CCDC27Q2M243 656 aa11.8□□□□□ -0.52
TVP23A-205ENST00000572428 C14orf93Q9H972 538 aaKnown RBP11.8□□□□□ -0.52
TVP23A-205ENST00000572428 ROCK2O75116 1388 aaKnown RBP11.8□□□□□ -0.52
TVP23A-205ENST00000572428 MED14O60244 1454 aa11.8□□□□□ -0.52
TVP23A-205ENST00000572428 SCAF11Q99590 1463 aaKnown RBP11.8□□□□□ -0.52
TVP23A-205ENST00000572428 RGS3P49796 1198 aa11.79□□□□□ -0.52
TVP23A-205ENST00000572428 AEBP1Q8IUX7 1158 aa11.79□□□□□ -0.52
TVP23A-205ENST00000572428 USP47Q96K76 1375 aa11.79□□□□□ -0.52
TVP23A-205ENST00000572428 MCCP23508 829 aa11.78□□□□□ -0.52
TVP23A-205ENST00000572428 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.78□□□□□ -0.52
TVP23A-205ENST00000572428 SUPT16HQ9Y5B9 1047 aaKnown RBP11.78□□□□□ -0.52
TVP23A-205ENST00000572428 EIF4G2P78344 907 aaKnown RBP eCLIP11.78□□□□□ -0.52
TVP23A-205ENST00000572428 RBM19Q9Y4C8 960 aaKnown RBP11.78□□□□□ -0.52
TVP23A-205ENST00000572428 DLC1Q96QB1 1528 aa11.78□□□□□ -0.52
TVP23A-205ENST00000572428 QRICH2Q9H0J4 1663 aa11.77□□□□□ -0.52
TVP23A-205ENST00000572428 PLEKHG1Q9ULL1 1385 aa11.77□□□□□ -0.52
TVP23A-205ENST00000572428 APBB1O00213 710 aa11.77□□□□□ -0.53
TVP23A-205ENST00000572428 CDCA8Q53HL2 280 aa11.77□□□□□ -0.53
TVP23A-205ENST00000572428 NBPF1Q3BBV0 1214 aa11.77□□□□□ -0.53
TVP23A-205ENST00000572428 CHGAP10645 457 aaKnown RBP11.76□□□□□ -0.53
TVP23A-205ENST00000572428 HSPA5P11021 654 aaKnown RBP11.76□□□□□ -0.53
TVP23A-205ENST00000572428 FOXD4L1Q9NU39 408 aa11.76□□□□□ -0.53
TVP23A-205ENST00000572428 PPP4R3CPQ6ZMV5 832 aa11.76□□□□□ -0.53
TVP23A-205ENST00000572428 HDGFP51858 240 aaKnown RBP11.75□□□□□ -0.53
TVP23A-205ENST00000572428 CARD11Q9BXL7 1154 aa11.75□□□□□ -0.53
TVP23A-205ENST00000572428 ADAMTS13Q76LX8 1427 aa11.75□□□□□ -0.53
TVP23A-205ENST00000572428 KDM4FA0A1W2PPD8 638 aa11.75□□□□□ -0.53
TVP23A-205ENST00000572428 PTMAP06454 111 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms