RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 MST1RQ04912 1400 aa18.41■□□□□ 0.54
TVP23B-204ENST00000571018 SIRT1Q96EB6 747 aa18.41■□□□□ 0.54
TVP23B-204ENST00000571018 KNDC1Q76NI1 1749 aa18.4■□□□□ 0.54
TVP23B-204ENST00000571018 BRINP3Q76B58 766 aa18.39■□□□□ 0.53
TVP23B-204ENST00000571018 WAPLQ7Z5K2 1190 aa18.39■□□□□ 0.53
TVP23B-204ENST00000571018 DISP3Q9P2K9 1392 aa18.37■□□□□ 0.53
TVP23B-204ENST00000571018 PLEKHH1Q9ULM0 1364 aa18.37■□□□□ 0.53
TVP23B-204ENST00000571018 ADGRB1O14514 1584 aa18.37■□□□□ 0.53
TVP23B-204ENST00000571018 SIN3AQ96ST3 1273 aa18.36■□□□□ 0.53
TVP23B-204ENST00000571018 PHLPP1O60346 1717 aa18.35■□□□□ 0.53
TVP23B-204ENST00000571018 AHDC1Q5TGY3 1603 aaPredicted RBP18.34■□□□□ 0.53
TVP23B-204ENST00000571018 C1orf167Q5SNV9 1468 aa18.34■□□□□ 0.53
TVP23B-204ENST00000571018 CDC42BPGQ6DT37 1551 aa18.34■□□□□ 0.53
TVP23B-204ENST00000571018 DLC1Q96QB1 1528 aa18.33■□□□□ 0.53
TVP23B-204ENST00000571018 COL16A1Q07092 1604 aaPredicted RBP18.32■□□□□ 0.52
TVP23B-204ENST00000571018 L3MBTL2Q969R5 705 aa18.32■□□□□ 0.52
TVP23B-204ENST00000571018 PRAM1Q96QH2 718 aa18.32■□□□□ 0.52
TVP23B-204ENST00000571018 MED1Q15648 1581 aaPredicted RBP18.32■□□□□ 0.52
TVP23B-204ENST00000571018 NEUROD1Q13562 356 aa18.31■□□□□ 0.52
TVP23B-204ENST00000571018 TRAK1Q9UPV9 953 aa18.31■□□□□ 0.52
TVP23B-204ENST00000571018 ORAI2Q96SN7 254 aa18.3■□□□□ 0.52
TVP23B-204ENST00000571018 JCADQ9P266 1359 aa18.3■□□□□ 0.52
TVP23B-204ENST00000571018 POGKQ9P215 609 aa18.29■□□□□ 0.52
TVP23B-204ENST00000571018 NHSL1Q5SYE7 1610 aa18.28■□□□□ 0.52
TVP23B-204ENST00000571018 KIAA1210Q9ULL0 1709 aa18.28■□□□□ 0.52
TVP23B-204ENST00000571018 SAFB2Q14151 953 aaKnown RBP eCLIP18.27■□□□□ 0.52
TVP23B-204ENST00000571018 DDX17Q92841 729 aaKnown RBP18.26■□□□□ 0.51
TVP23B-204ENST00000571018 NBPF1Q3BBV0 1214 aa18.25■□□□□ 0.51
TVP23B-204ENST00000571018 ESCO1Q5FWF5 840 aa18.25■□□□□ 0.51
TVP23B-204ENST00000571018 FMN2Q9NZ56 1722 aa18.24■□□□□ 0.51
TVP23B-204ENST00000571018 NUTM2FA1L443 756 aa18.24■□□□□ 0.51
TVP23B-204ENST00000571018 LRRC59Q96AG4 307 aaKnown RBP18.24■□□□□ 0.51
TVP23B-204ENST00000571018 SOS2Q07890 1332 aaPredicted RBP18.23■□□□□ 0.51
TVP23B-204ENST00000571018 SPATA31A6Q5VVP1 1343 aa18.23■□□□□ 0.51
TVP23B-204ENST00000571018 ADGRB2O60241 1585 aa18.21■□□□□ 0.51
TVP23B-204ENST00000571018 SOCS7O14512 581 aa18.21■□□□□ 0.51
TVP23B-204ENST00000571018 SHPRHQ149N8 1683 aa18.21■□□□□ 0.51
TVP23B-204ENST00000571018 NPHP3Q7Z494 1330 aa18.21■□□□□ 0.51
TVP23B-204ENST00000571018 MINK1Q8N4C8 1332 aaPredicted RBP18.21■□□□□ 0.51
TVP23B-204ENST00000571018 ARHGEF28Q8N1W1 1705 aaKnown RBP18.2■□□□□ 0.5
TVP23B-204ENST00000571018 ILDR2Q71H61 639 aa18.2■□□□□ 0.5
TVP23B-204ENST00000571018 HIRIP3Q9BW71 556 aaPredicted RBP18.2■□□□□ 0.5
TVP23B-204ENST00000571018 FOXO3O43524 673 aa18.19■□□□□ 0.5
TVP23B-204ENST00000571018 PCGF6Q9BYE7 350 aa18.19■□□□□ 0.5
TVP23B-204ENST00000571018 ANKARQ7Z5J8 1434 aa18.18■□□□□ 0.5
TVP23B-204ENST00000571018 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
TVP23B-204ENST00000571018 TONSLQ96HA7 1378 aa18.17■□□□□ 0.5
TVP23B-204ENST00000571018 WASLO00401 505 aaPredicted RBP18.17■□□□□ 0.5
TVP23B-204ENST00000571018 PNPLA6Q8IY17 1366 aa18.17■□□□□ 0.5
TVP23B-204ENST00000571018 TRPM1Q7Z4N2 1603 aa18.16■□□□□ 0.5
TVP23B-204ENST00000571018 PHF8Q9UPP1 1060 aa18.16■□□□□ 0.5
TVP23B-204ENST00000571018 LRP6O75581 1613 aa18.16■□□□□ 0.5
TVP23B-204ENST00000571018 EIF3AQ14152 1382 aaKnown RBP18.16■□□□□ 0.5
TVP23B-204ENST00000571018 KIF1AQ12756 1690 aa18.15■□□□□ 0.5
TVP23B-204ENST00000571018 PXDNQ92626 1479 aa18.15■□□□□ 0.5
TVP23B-204ENST00000571018 NBPF8Q3BBV2 869 aa18.15■□□□□ 0.5
TVP23B-204ENST00000571018 RGS17Q9UGC6 210 aaPredicted RBP18.15■□□□□ 0.5
TVP23B-204ENST00000571018 USP32Q8NFA0 1604 aa18.14■□□□□ 0.49
TVP23B-204ENST00000571018 RGPD8O14715 1765 aaPredicted RBP18.14■□□□□ 0.49
TVP23B-204ENST00000571018 TULP4Q9NRJ4 1543 aa18.13■□□□□ 0.49
TVP23B-204ENST00000571018 XPCQ01831 940 aaPredicted RBP18.13■□□□□ 0.49
TVP23B-204ENST00000571018 PRR36Q9H6K5 1346 aa18.13■□□□□ 0.49
TVP23B-204ENST00000571018 ROCK2O75116 1388 aaKnown RBP18.13■□□□□ 0.49
TVP23B-204ENST00000571018 NUTM2BA6NNL0 878 aaPredicted RBP18.12■□□□□ 0.49
TVP23B-204ENST00000571018 NUTM2EB1AL46 878 aaPredicted RBP18.12■□□□□ 0.49
TVP23B-204ENST00000571018 NUTM2AQ8IVF1 878 aaPredicted RBP18.12■□□□□ 0.49
TVP23B-204ENST00000571018 CENPJQ9HC77 1338 aaPredicted RBP18.12■□□□□ 0.49
TVP23B-204ENST00000571018 KRT28Q7Z3Y7 464 aa18.11■□□□□ 0.49
TVP23B-204ENST00000571018 GPRASP1Q5JY77 1395 aa18.1■□□□□ 0.49
TVP23B-204ENST00000571018 MEX3CQ5U5Q3 659 aaKnown RBP18.1■□□□□ 0.49
TVP23B-204ENST00000571018 CDK19Q9BWU1 502 aa18.1■□□□□ 0.49
TVP23B-204ENST00000571018 CLSPNQ9HAW4 1339 aa18.09■□□□□ 0.49
TVP23B-204ENST00000571018 PMFBP1Q8TBY8 1022 aa18.09■□□□□ 0.49
TVP23B-204ENST00000571018 SPATA31A3Q5VYP0 1347 aa18.08■□□□□ 0.49
TVP23B-204ENST00000571018 ZBTB22O15209 634 aa18.08■□□□□ 0.48
TVP23B-204ENST00000571018 PSME1Q06323 249 aa18.08■□□□□ 0.48
TVP23B-204ENST00000571018 NUDT16Q96DE0 195 aaKnown RBP18.08■□□□□ 0.48
TVP23B-204ENST00000571018 ATP7BP35670 1465 aa18.07■□□□□ 0.48
TVP23B-204ENST00000571018 FOXD4L1Q9NU39 408 aa18.07■□□□□ 0.48
TVP23B-204ENST00000571018 COL22A1Q8NFW1 1626 aaPredicted RBP18.07■□□□□ 0.48
TVP23B-204ENST00000571018 POTEAQ6S8J7 498 aa18.06■□□□□ 0.48
TVP23B-204ENST00000571018 RALGAPBQ86X10 1494 aa18.06■□□□□ 0.48
TVP23B-204ENST00000571018 SBNO1A3KN83 1393 aa18.05■□□□□ 0.48
TVP23B-204ENST00000571018 CARD11Q9BXL7 1154 aa18.05■□□□□ 0.48
TVP23B-204ENST00000571018 CCDC61Q9Y6R9 512 aa18.05■□□□□ 0.48
TVP23B-204ENST00000571018 QRICH2Q9H0J4 1663 aa18.04■□□□□ 0.48
TVP23B-204ENST00000571018 ADAMTS2O95450 1211 aa18.03■□□□□ 0.48
TVP23B-204ENST00000571018 ZNF772Q68DY9 489 aaPredicted RBP18.03■□□□□ 0.48
TVP23B-204ENST00000571018 NGDNQ8NEJ9 315 aaKnown RBP18.03■□□□□ 0.48
TVP23B-204ENST00000571018 TIMELESSQ9UNS1 1208 aa18.03■□□□□ 0.48
TVP23B-204ENST00000571018 TNS3Q68CZ2 1445 aa18.03■□□□□ 0.48
TVP23B-204ENST00000571018 SRPK2P78362 688 aaKnown RBP18.02■□□□□ 0.48
TVP23B-204ENST00000571018 ITSN1Q15811 1721 aa18.02■□□□□ 0.48
TVP23B-204ENST00000571018 C8orf37Q96NL8 207 aa18.02■□□□□ 0.48
TVP23B-204ENST00000571018 PLEKHG3A1L390 1219 aa18.01■□□□□ 0.47
TVP23B-204ENST00000571018 CABP2Q9NPB3 220 aa18.01■□□□□ 0.47
TVP23B-204ENST00000571018 AFF2P51816 1311 aa18■□□□□ 0.47
TVP23B-204ENST00000571018 EVC2Q86UK5 1308 aa18■□□□□ 0.47
TVP23B-204ENST00000571018 POLR3AO14802 1390 aaPredicted RBP18■□□□□ 0.47
TVP23B-204ENST00000571018 ARHGEF10O15013 1369 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms