RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 DLC1Q96QB1 1528 aa16.14■□□□□ 0.17
SMG6-206ENST00000570668 MED1Q15648 1581 aaPredicted RBP16.13■□□□□ 0.17
SMG6-206ENST00000570668 COL16A1Q07092 1604 aaPredicted RBP16.12■□□□□ 0.17
SMG6-206ENST00000570668 L3MBTL2Q969R5 705 aa16.12■□□□□ 0.17
SMG6-206ENST00000570668 PRAM1Q96QH2 718 aa16.11■□□□□ 0.17
SMG6-206ENST00000570668 JCADQ9P266 1359 aa16.11■□□□□ 0.17
SMG6-206ENST00000570668 NEUROD1Q13562 356 aa16.1■□□□□ 0.17
SMG6-206ENST00000570668 TRAK1Q9UPV9 953 aa16.1■□□□□ 0.17
SMG6-206ENST00000570668 KIAA1210Q9ULL0 1709 aa16.1■□□□□ 0.17
SMG6-206ENST00000570668 NHSL1Q5SYE7 1610 aa16.09■□□□□ 0.17
SMG6-206ENST00000570668 ORAI2Q96SN7 254 aa16.09■□□□□ 0.17
SMG6-206ENST00000570668 POGKQ9P215 609 aa16.09■□□□□ 0.17
SMG6-206ENST00000570668 SAFB2Q14151 953 aaKnown RBP eCLIP16.07■□□□□ 0.16
SMG6-206ENST00000570668 FMN2Q9NZ56 1722 aa16.06■□□□□ 0.16
SMG6-206ENST00000570668 NBPF1Q3BBV0 1214 aa16.05■□□□□ 0.16
SMG6-206ENST00000570668 ESCO1Q5FWF5 840 aa16.05■□□□□ 0.16
SMG6-206ENST00000570668 DDX17Q92841 729 aaKnown RBP16.05■□□□□ 0.16
SMG6-206ENST00000570668 LRRC59Q96AG4 307 aaKnown RBP16.05■□□□□ 0.16
SMG6-206ENST00000570668 SOS2Q07890 1332 aaPredicted RBP16.04■□□□□ 0.16
SMG6-206ENST00000570668 NUTM2FA1L443 756 aa16.04■□□□□ 0.16
SMG6-206ENST00000570668 ADGRB2O60241 1585 aa16.04■□□□□ 0.16
SMG6-206ENST00000570668 ARHGEF28Q8N1W1 1705 aaKnown RBP16.03■□□□□ 0.16
SMG6-206ENST00000570668 SPATA31A6Q5VVP1 1343 aa16.03■□□□□ 0.16
SMG6-206ENST00000570668 SHPRHQ149N8 1683 aa16.03■□□□□ 0.16
SMG6-206ENST00000570668 NPHP3Q7Z494 1330 aa16.01■□□□□ 0.15
SMG6-206ENST00000570668 MINK1Q8N4C8 1332 aaPredicted RBP16.01■□□□□ 0.15
SMG6-206ENST00000570668 ILDR2Q71H61 639 aa16.01■□□□□ 0.15
SMG6-206ENST00000570668 FOXO3O43524 673 aa16■□□□□ 0.15
SMG6-206ENST00000570668 HIRIP3Q9BW71 556 aaPredicted RBP16■□□□□ 0.15
SMG6-206ENST00000570668 PCGF6Q9BYE7 350 aa16■□□□□ 0.15
SMG6-206ENST00000570668 ANKARQ7Z5J8 1434 aa16■□□□□ 0.15
SMG6-206ENST00000570668 EIF3AQ14152 1382 aaKnown RBP15.99■□□□□ 0.15
SMG6-206ENST00000570668 PNPLA6Q8IY17 1366 aa15.99■□□□□ 0.15
SMG6-206ENST00000570668 TONSLQ96HA7 1378 aa15.99■□□□□ 0.15
SMG6-206ENST00000570668 TRPM1Q7Z4N2 1603 aa15.98■□□□□ 0.15
SMG6-206ENST00000570668 WASLO00401 505 aaPredicted RBP15.98■□□□□ 0.15
SMG6-206ENST00000570668 KIF1AQ12756 1690 aa15.98■□□□□ 0.15
SMG6-206ENST00000570668 RGPD8O14715 1765 aaPredicted RBP15.98■□□□□ 0.15
SMG6-206ENST00000570668 LRP6O75581 1613 aa15.97■□□□□ 0.15
SMG6-206ENST00000570668 PXDNQ92626 1479 aa15.97■□□□□ 0.15
SMG6-206ENST00000570668 NBPF8Q3BBV2 869 aa15.97■□□□□ 0.15
SMG6-206ENST00000570668 RGS17Q9UGC6 210 aaPredicted RBP15.97■□□□□ 0.15
SMG6-206ENST00000570668 PHF8Q9UPP1 1060 aa15.97■□□□□ 0.15
SMG6-206ENST00000570668 USP32Q8NFA0 1604 aa15.97■□□□□ 0.15
SMG6-206ENST00000570668 PRR36Q9H6K5 1346 aa15.95■□□□□ 0.14
SMG6-206ENST00000570668 TULP4Q9NRJ4 1543 aa15.95■□□□□ 0.14
SMG6-206ENST00000570668 ROCK2O75116 1388 aaKnown RBP15.95■□□□□ 0.14
SMG6-206ENST00000570668 CENPJQ9HC77 1338 aaPredicted RBP15.94■□□□□ 0.14
SMG6-206ENST00000570668 XPCQ01831 940 aaPredicted RBP15.94■□□□□ 0.14
SMG6-206ENST00000570668 GPRASP1Q5JY77 1395 aa15.94■□□□□ 0.14
SMG6-206ENST00000570668 NUTM2BA6NNL0 878 aaPredicted RBP15.93■□□□□ 0.14
SMG6-206ENST00000570668 NUTM2EB1AL46 878 aaPredicted RBP15.93■□□□□ 0.14
SMG6-206ENST00000570668 KRT28Q7Z3Y7 464 aa15.93■□□□□ 0.14
SMG6-206ENST00000570668 NUTM2AQ8IVF1 878 aaPredicted RBP15.93■□□□□ 0.14
SMG6-206ENST00000570668 CLSPNQ9HAW4 1339 aa15.93■□□□□ 0.14
SMG6-206ENST00000570668 PMFBP1Q8TBY8 1022 aa15.92■□□□□ 0.14
SMG6-206ENST00000570668 CDK19Q9BWU1 502 aa15.92■□□□□ 0.14
SMG6-206ENST00000570668 SPATA31A3Q5VYP0 1347 aa15.92■□□□□ 0.14
SMG6-206ENST00000570668 MEX3CQ5U5Q3 659 aaKnown RBP15.91■□□□□ 0.14
SMG6-206ENST00000570668 NUDT16Q96DE0 195 aaKnown RBP15.91■□□□□ 0.14
SMG6-206ENST00000570668 ATP7BP35670 1465 aa15.91■□□□□ 0.14
SMG6-206ENST00000570668 COL22A1Q8NFW1 1626 aaPredicted RBP15.9■□□□□ 0.14
SMG6-206ENST00000570668 PSME1Q06323 249 aa15.9■□□□□ 0.14
SMG6-206ENST00000570668 RALGAPBQ86X10 1494 aa15.9■□□□□ 0.14
SMG6-206ENST00000570668 SBNO1A3KN83 1393 aa15.88■□□□□ 0.13
SMG6-206ENST00000570668 POTEAQ6S8J7 498 aa15.88■□□□□ 0.13
SMG6-206ENST00000570668 CCDC61Q9Y6R9 512 aa15.88■□□□□ 0.13
SMG6-206ENST00000570668 QRICH2Q9H0J4 1663 aa15.88■□□□□ 0.13
SMG6-206ENST00000570668 ITSN1Q15811 1721 aa15.88■□□□□ 0.13
SMG6-206ENST00000570668 CARD11Q9BXL7 1154 aa15.87■□□□□ 0.13
SMG6-206ENST00000570668 TNS3Q68CZ2 1445 aa15.86■□□□□ 0.13
SMG6-206ENST00000570668 ADAMTS2O95450 1211 aa15.86■□□□□ 0.13
SMG6-206ENST00000570668 ZNF772Q68DY9 489 aaPredicted RBP15.86■□□□□ 0.13
SMG6-206ENST00000570668 NGDNQ8NEJ9 315 aaKnown RBP15.86■□□□□ 0.13
SMG6-206ENST00000570668 TIMELESSQ9UNS1 1208 aa15.86■□□□□ 0.13
SMG6-206ENST00000570668 PLEKHG3A1L390 1219 aa15.85■□□□□ 0.13
SMG6-206ENST00000570668 SOCS7O14512 581 aa15.85■□□□□ 0.13
SMG6-206ENST00000570668 SRPK2P78362 688 aaKnown RBP15.85■□□□□ 0.13
SMG6-206ENST00000570668 TOPAZ1Q8N9V7 1692 aa15.84■□□□□ 0.13
SMG6-206ENST00000570668 C8orf37Q96NL8 207 aa15.84■□□□□ 0.13
SMG6-206ENST00000570668 CABP2Q9NPB3 220 aa15.84■□□□□ 0.13
SMG6-206ENST00000570668 AFF2P51816 1311 aa15.84■□□□□ 0.13
SMG6-206ENST00000570668 POLR3AO14802 1390 aaPredicted RBP15.84■□□□□ 0.13
SMG6-206ENST00000570668 ARHGEF10O15013 1369 aa15.84■□□□□ 0.13
SMG6-206ENST00000570668 TRPM3Q9HCF6 1732 aaPredicted RBP15.83■□□□□ 0.13
SMG6-206ENST00000570668 EVC2Q86UK5 1308 aa15.83■□□□□ 0.12
SMG6-206ENST00000570668 SBNO2Q9Y2G9 1366 aa15.83■□□□□ 0.12
SMG6-206ENST00000570668 NGLY1Q96IV0 654 aa15.82■□□□□ 0.12
SMG6-206ENST00000570668 ACEP12821 1306 aa15.81■□□□□ 0.12
SMG6-206ENST00000570668 LMOD2Q6P5Q4 547 aa15.81■□□□□ 0.12
SMG6-206ENST00000570668 ALS2Q96Q42 1657 aa15.8■□□□□ 0.12
SMG6-206ENST00000570668 PPIP5K1Q6PFW1 1433 aa15.8■□□□□ 0.12
SMG6-206ENST00000570668 FNBP4Q8N3X1 1017 aaPredicted RBP15.8■□□□□ 0.12
SMG6-206ENST00000570668 CCER1Q8TC90 406 aaPredicted RBP15.8■□□□□ 0.12
SMG6-206ENST00000570668 MARF1Q9Y4F3 1742 aaKnown RBP15.79■□□□□ 0.12
SMG6-206ENST00000570668 CABLES1Q8TDN4 633 aa15.78■□□□□ 0.12
SMG6-206ENST00000570668 CABP1Q9NZU7 370 aa15.78■□□□□ 0.12
SMG6-206ENST00000570668 PAK3O75914 559 aaPredicted RBP15.77■□□□□ 0.12
SMG6-206ENST00000570668 RXRBP28702 533 aa15.76■□□□□ 0.11
SMG6-206ENST00000570668 HAP1P54257 671 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms