RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 NHSL1Q5SYE7 1610 aa36.92■■■■□ 3.5
CCNF-205ENST00000569093 RGS17Q9UGC6 210 aaPredicted RBP36.9■■■■□ 3.5
CCNF-205ENST00000569093 CDC42BPGQ6DT37 1551 aa36.87■■■■□ 3.49
CCNF-205ENST00000569093 SIRT1Q96EB6 747 aa36.86■■■■□ 3.49
CCNF-205ENST00000569093 SOCS7O14512 581 aa36.84■■■■□ 3.49
CCNF-205ENST00000569093 NUTM2FA1L443 756 aa36.83■■■■□ 3.49
CCNF-205ENST00000569093 STAC3Q96MF2 364 aa36.83■■■■□ 3.49
CCNF-205ENST00000569093 SHPRHQ149N8 1683 aa36.83■■■■□ 3.49
CCNF-205ENST00000569093 ADGRB1O14514 1584 aa36.81■■■■□ 3.48
CCNF-205ENST00000569093 SPATA31A6Q5VVP1 1343 aa36.81■■■■□ 3.48
CCNF-205ENST00000569093 PRAM1Q96QH2 718 aa36.8■■■■□ 3.48
CCNF-205ENST00000569093 SAFB2Q14151 953 aaKnown RBP eCLIP36.79■■■■□ 3.48
CCNF-205ENST00000569093 ESCO1Q5FWF5 840 aa36.79■■■■□ 3.48
CCNF-205ENST00000569093 LRRC59Q96AG4 307 aaKnown RBP36.79■■■■□ 3.48
CCNF-205ENST00000569093 LRP6O75581 1613 aa36.78■■■■□ 3.48
CCNF-205ENST00000569093 TRAK1Q9UPV9 953 aa36.77■■■■□ 3.48
CCNF-205ENST00000569093 NUTM2BA6NNL0 878 aaPredicted RBP36.74■■■■□ 3.47
CCNF-205ENST00000569093 NUTM2EB1AL46 878 aaPredicted RBP36.74■■■■□ 3.47
CCNF-205ENST00000569093 NUTM2AQ8IVF1 878 aaPredicted RBP36.74■■■■□ 3.47
CCNF-205ENST00000569093 POGKQ9P215 609 aa36.74■■■■□ 3.47
CCNF-205ENST00000569093 DLC1Q96QB1 1528 aa36.73■■■■□ 3.47
CCNF-205ENST00000569093 FMN2Q9NZ56 1722 aa36.73■■■■□ 3.47
CCNF-205ENST00000569093 SOS2Q07890 1332 aaPredicted RBP36.72■■■■□ 3.47
CCNF-205ENST00000569093 POTEAQ6S8J7 498 aa36.7■■■■□ 3.47
CCNF-205ENST00000569093 MEX3CQ5U5Q3 659 aaKnown RBP36.69■■■■□ 3.46
CCNF-205ENST00000569093 SIN3AQ96ST3 1273 aa36.69■■■■□ 3.46
CCNF-205ENST00000569093 PNPLA6Q8IY17 1366 aa36.68■■■■□ 3.46
CCNF-205ENST00000569093 FOXO3O43524 673 aa36.67■■■■□ 3.46
CCNF-205ENST00000569093 RGPD8O14715 1765 aaPredicted RBP36.64■■■■□ 3.46
CCNF-205ENST00000569093 XPCQ01831 940 aaPredicted RBP36.64■■■■□ 3.46
CCNF-205ENST00000569093 NPHP3Q7Z494 1330 aa36.63■■■■□ 3.45
CCNF-205ENST00000569093 TRIM26Q12899 539 aaPredicted RBP36.63■■■■□ 3.45
CCNF-205ENST00000569093 HIRIP3Q9BW71 556 aaPredicted RBP36.62■■■■□ 3.45
CCNF-205ENST00000569093 NEUROD1Q13562 356 aa36.6■■■■□ 3.45
CCNF-205ENST00000569093 MINK1Q8N4C8 1332 aaPredicted RBP36.59■■■■□ 3.45
CCNF-205ENST00000569093 PXDNQ92626 1479 aa36.59■■■■□ 3.45
CCNF-205ENST00000569093 L3MBTL2Q969R5 705 aa36.59■■■■□ 3.45
CCNF-205ENST00000569093 NBPF1Q3BBV0 1214 aa36.57■■■■□ 3.44
CCNF-205ENST00000569093 KIAA1210Q9ULL0 1709 aa36.55■■■■□ 3.44
CCNF-205ENST00000569093 ARHGEF28Q8N1W1 1705 aaKnown RBP36.54■■■■□ 3.44
CCNF-205ENST00000569093 ADGRB2O60241 1585 aa36.54■■■■□ 3.44
CCNF-205ENST00000569093 PHF8Q9UPP1 1060 aa36.53■■■■□ 3.44
CCNF-205ENST00000569093 KIF1AQ12756 1690 aa36.52■■■■□ 3.44
CCNF-205ENST00000569093 USP32Q8NFA0 1604 aa36.51■■■■□ 3.43
CCNF-205ENST00000569093 ADAMTS2O95450 1211 aa36.5■■■■□ 3.43
CCNF-205ENST00000569093 ZNF772Q68DY9 489 aaPredicted RBP36.49■■■■□ 3.43
CCNF-205ENST00000569093 KRT28Q7Z3Y7 464 aa36.49■■■■□ 3.43
CCNF-205ENST00000569093 C8orf37Q96NL8 207 aa36.48■■■■□ 3.43
CCNF-205ENST00000569093 WASLO00401 505 aaPredicted RBP36.47■■■■□ 3.43
CCNF-205ENST00000569093 AFF2P51816 1311 aa36.47■■■■□ 3.43
CCNF-205ENST00000569093 ANKARQ7Z5J8 1434 aa36.46■■■■□ 3.43
CCNF-205ENST00000569093 PMFBP1Q8TBY8 1022 aa36.46■■■■□ 3.43
CCNF-205ENST00000569093 COL22A1Q8NFW1 1626 aaPredicted RBP36.45■■■■□ 3.43
CCNF-205ENST00000569093 PRR36Q9H6K5 1346 aa36.44■■■■□ 3.42
CCNF-205ENST00000569093 SPATA31A3Q5VYP0 1347 aa36.42■■■■□ 3.42
CCNF-205ENST00000569093 NGLY1Q96IV0 654 aa36.4■■■■□ 3.42
CCNF-205ENST00000569093 PSME1Q06323 249 aa36.39■■■■□ 3.42
CCNF-205ENST00000569093 TULP4Q9NRJ4 1543 aa36.39■■■■□ 3.42
CCNF-205ENST00000569093 EIF3AQ14152 1382 aaKnown RBP36.38■■■■□ 3.41
CCNF-205ENST00000569093 CDK19Q9BWU1 502 aa36.35■■■■□ 3.41
CCNF-205ENST00000569093 NUDT16Q96DE0 195 aaKnown RBP36.32■■■■□ 3.4
CCNF-205ENST00000569093 TRPM1Q7Z4N2 1603 aa36.32■■■■□ 3.4
CCNF-205ENST00000569093 TNS3Q68CZ2 1445 aa36.31■■■■□ 3.4
CCNF-205ENST00000569093 RXRBP28702 533 aa36.3■■■■□ 3.4
CCNF-205ENST00000569093 QTRT2Q9H974 415 aaKnown RBP36.3■■■■□ 3.4
CCNF-205ENST00000569093 PLEKHG5O94827 1062 aa36.29■■■■□ 3.4
CCNF-205ENST00000569093 NBPF8Q3BBV2 869 aa36.29■■■■□ 3.4
CCNF-205ENST00000569093 LMOD2Q6P5Q4 547 aa36.29■■■■□ 3.4
CCNF-205ENST00000569093 SBNO1A3KN83 1393 aa36.28■■■■□ 3.4
CCNF-205ENST00000569093 ATP7BP35670 1465 aa36.28■■■■□ 3.4
CCNF-205ENST00000569093 CENPJQ9HC77 1338 aaPredicted RBP36.28■■■■□ 3.4
CCNF-205ENST00000569093 NGDNQ8NEJ9 315 aaKnown RBP36.26■■■■□ 3.4
CCNF-205ENST00000569093 CABLES1Q8TDN4 633 aa36.26■■■■□ 3.4
CCNF-205ENST00000569093 MARF1Q9Y4F3 1742 aaKnown RBP36.25■■■■□ 3.39
CCNF-205ENST00000569093 FNBP4Q8N3X1 1017 aaPredicted RBP36.25■■■■□ 3.39
CCNF-205ENST00000569093 USP21Q9UK80 565 aa36.25■■■■□ 3.39
CCNF-205ENST00000569093 ROCK2O75116 1388 aaKnown RBP36.23■■■■□ 3.39
CCNF-205ENST00000569093 GPRASP1Q5JY77 1395 aa36.23■■■■□ 3.39
CCNF-205ENST00000569093 ITSN1Q15811 1721 aa36.22■■■■□ 3.39
CCNF-205ENST00000569093 TRPM3Q9HCF6 1732 aaPredicted RBP36.22■■■■□ 3.39
CCNF-205ENST00000569093 QRICH2Q9H0J4 1663 aa36.21■■■■□ 3.39
CCNF-205ENST00000569093 ARHGEF10O15013 1369 aa36.19■■■■□ 3.38
CCNF-205ENST00000569093 TONSLQ96HA7 1378 aa36.19■■■■□ 3.38
CCNF-205ENST00000569093 HAP1P54257 671 aaPredicted RBP36.18■■■■□ 3.38
CCNF-205ENST00000569093 RBM6P78332 1123 aaKnown RBP36.18■■■■□ 3.38
CCNF-205ENST00000569093 CCDC61Q9Y6R9 512 aa36.17■■■■□ 3.38
CCNF-205ENST00000569093 SRPK2P78362 688 aaKnown RBP36.16■■■■□ 3.38
CCNF-205ENST00000569093 CABP2Q9NPB3 220 aa36.16■■■■□ 3.38
CCNF-205ENST00000569093 TOPAZ1Q8N9V7 1692 aa36.15■■■■□ 3.38
CCNF-205ENST00000569093 ALS2Q96Q42 1657 aa36.14■■■■□ 3.38
CCNF-205ENST00000569093 PAK3O75914 559 aaPredicted RBP36.14■■■■□ 3.38
CCNF-205ENST00000569093 BCL9LQ86UU0 1499 aa36.13■■■■□ 3.37
CCNF-205ENST00000569093 TRPC5Q9UL62 973 aaPredicted RBP36.13■■■■□ 3.37
CCNF-205ENST00000569093 ACEP12821 1306 aa36.12■■■■□ 3.37
CCNF-205ENST00000569093 ABCA3Q99758 1704 aa36.12■■■■□ 3.37
CCNF-205ENST00000569093 CDK12Q9NYV4 1490 aaPredicted RBP36.11■■■■□ 3.37
CCNF-205ENST00000569093 PLEKHG3A1L390 1219 aa36.11■■■■□ 3.37
CCNF-205ENST00000569093 ATRNO75882 1429 aa36.09■■■■□ 3.37
CCNF-205ENST00000569093 POLR3AO14802 1390 aaPredicted RBP36.08■■■■□ 3.37
CCNF-205ENST00000569093 RGS12O14924 1447 aa36.07■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms