RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 SIRT1Q96EB6 747 aa25.52■■□□□ 1.68
EDC3-215ENST00000569007 DDX17Q92841 729 aaKnown RBP25.51■■□□□ 1.67
EDC3-215ENST00000569007 NHSL1Q5SYE7 1610 aa25.5■■□□□ 1.67
EDC3-215ENST00000569007 ORAI2Q96SN7 254 aa25.5■■□□□ 1.67
EDC3-215ENST00000569007 ADGRB1O14514 1584 aa25.49■■□□□ 1.67
EDC3-215ENST00000569007 PRAM1Q96QH2 718 aa25.46■■□□□ 1.67
EDC3-215ENST00000569007 SPATA31A6Q5VVP1 1343 aa25.44■■□□□ 1.66
EDC3-215ENST00000569007 DLC1Q96QB1 1528 aa25.44■■□□□ 1.66
EDC3-215ENST00000569007 NUTM2FA1L443 756 aa25.44■■□□□ 1.66
EDC3-215ENST00000569007 TRIM26Q12899 539 aaPredicted RBP25.44■■□□□ 1.66
EDC3-215ENST00000569007 SAFB2Q14151 953 aaKnown RBP eCLIP25.44■■□□□ 1.66
EDC3-215ENST00000569007 SHPRHQ149N8 1683 aa25.44■■□□□ 1.66
EDC3-215ENST00000569007 ESCO1Q5FWF5 840 aa25.43■■□□□ 1.66
EDC3-215ENST00000569007 LRRC59Q96AG4 307 aaKnown RBP25.43■■□□□ 1.66
EDC3-215ENST00000569007 POGKQ9P215 609 aa25.43■■□□□ 1.66
EDC3-215ENST00000569007 RGS17Q9UGC6 210 aaPredicted RBP25.43■■□□□ 1.66
EDC3-215ENST00000569007 TRAK1Q9UPV9 953 aa25.43■■□□□ 1.66
EDC3-215ENST00000569007 SIN3AQ96ST3 1273 aa25.4■■□□□ 1.66
EDC3-215ENST00000569007 LRP6O75581 1613 aa25.4■■□□□ 1.66
EDC3-215ENST00000569007 FMN2Q9NZ56 1722 aa25.39■■□□□ 1.65
EDC3-215ENST00000569007 SOS2Q07890 1332 aaPredicted RBP25.38■■□□□ 1.65
EDC3-215ENST00000569007 SOCS7O14512 581 aa25.37■■□□□ 1.65
EDC3-215ENST00000569007 NUTM2BA6NNL0 878 aaPredicted RBP25.36■■□□□ 1.65
EDC3-215ENST00000569007 NUTM2EB1AL46 878 aaPredicted RBP25.36■■□□□ 1.65
EDC3-215ENST00000569007 NUTM2AQ8IVF1 878 aaPredicted RBP25.36■■□□□ 1.65
EDC3-215ENST00000569007 PNPLA6Q8IY17 1366 aa25.35■■□□□ 1.65
EDC3-215ENST00000569007 NEUROD1Q13562 356 aa25.35■■□□□ 1.65
EDC3-215ENST00000569007 MEX3CQ5U5Q3 659 aaKnown RBP25.35■■□□□ 1.65
EDC3-215ENST00000569007 L3MBTL2Q969R5 705 aa25.35■■□□□ 1.65
EDC3-215ENST00000569007 NPHP3Q7Z494 1330 aa25.35■■□□□ 1.65
EDC3-215ENST00000569007 FOXO3O43524 673 aa25.34■■□□□ 1.65
EDC3-215ENST00000569007 MINK1Q8N4C8 1332 aaPredicted RBP25.33■■□□□ 1.64
EDC3-215ENST00000569007 HIRIP3Q9BW71 556 aaPredicted RBP25.32■■□□□ 1.64
EDC3-215ENST00000569007 KIAA1210Q9ULL0 1709 aa25.32■■□□□ 1.64
EDC3-215ENST00000569007 XPCQ01831 940 aaPredicted RBP25.31■■□□□ 1.64
EDC3-215ENST00000569007 POTEAQ6S8J7 498 aa25.31■■□□□ 1.64
EDC3-215ENST00000569007 ADGRB2O60241 1585 aa25.31■■□□□ 1.64
EDC3-215ENST00000569007 PXDNQ92626 1479 aa25.3■■□□□ 1.64
EDC3-215ENST00000569007 NBPF1Q3BBV0 1214 aa25.3■■□□□ 1.64
EDC3-215ENST00000569007 ARHGEF28Q8N1W1 1705 aaKnown RBP25.29■■□□□ 1.64
EDC3-215ENST00000569007 KIF1AQ12756 1690 aa25.27■■□□□ 1.64
EDC3-215ENST00000569007 RGPD8O14715 1765 aaPredicted RBP25.27■■□□□ 1.64
EDC3-215ENST00000569007 PHF8Q9UPP1 1060 aa25.27■■□□□ 1.64
EDC3-215ENST00000569007 ANKARQ7Z5J8 1434 aa25.26■■□□□ 1.63
EDC3-215ENST00000569007 USP32Q8NFA0 1604 aa25.24■■□□□ 1.63
EDC3-215ENST00000569007 WASLO00401 505 aaPredicted RBP25.24■■□□□ 1.63
EDC3-215ENST00000569007 EIF3AQ14152 1382 aaKnown RBP25.22■■□□□ 1.63
EDC3-215ENST00000569007 KRT28Q7Z3Y7 464 aa25.22■■□□□ 1.63
EDC3-215ENST00000569007 PRR36Q9H6K5 1346 aa25.21■■□□□ 1.63
EDC3-215ENST00000569007 ADAMTS2O95450 1211 aa25.2■■□□□ 1.62
EDC3-215ENST00000569007 ZNF772Q68DY9 489 aaPredicted RBP25.2■■□□□ 1.62
EDC3-215ENST00000569007 PMFBP1Q8TBY8 1022 aa25.2■■□□□ 1.62
EDC3-215ENST00000569007 TULP4Q9NRJ4 1543 aa25.2■■□□□ 1.62
EDC3-215ENST00000569007 COL22A1Q8NFW1 1626 aaPredicted RBP25.19■■□□□ 1.62
EDC3-215ENST00000569007 C8orf37Q96NL8 207 aa25.19■■□□□ 1.62
EDC3-215ENST00000569007 AFF2P51816 1311 aa25.18■■□□□ 1.62
EDC3-215ENST00000569007 SPATA31A3Q5VYP0 1347 aa25.18■■□□□ 1.62
EDC3-215ENST00000569007 PSME1Q06323 249 aa25.16■■□□□ 1.62
EDC3-215ENST00000569007 TRPM1Q7Z4N2 1603 aa25.15■■□□□ 1.62
EDC3-215ENST00000569007 NGLY1Q96IV0 654 aa25.14■■□□□ 1.62
EDC3-215ENST00000569007 CDK19Q9BWU1 502 aa25.14■■□□□ 1.62
EDC3-215ENST00000569007 CENPJQ9HC77 1338 aaPredicted RBP25.13■■□□□ 1.61
EDC3-215ENST00000569007 NUDT16Q96DE0 195 aaKnown RBP25.13■■□□□ 1.61
EDC3-215ENST00000569007 TNS3Q68CZ2 1445 aa25.12■■□□□ 1.61
EDC3-215ENST00000569007 NBPF8Q3BBV2 869 aa25.12■■□□□ 1.61
EDC3-215ENST00000569007 SBNO1A3KN83 1393 aa25.12■■□□□ 1.61
EDC3-215ENST00000569007 TONSLQ96HA7 1378 aa25.12■■□□□ 1.61
EDC3-215ENST00000569007 ATP7BP35670 1465 aa25.12■■□□□ 1.61
EDC3-215ENST00000569007 ROCK2O75116 1388 aaKnown RBP25.11■■□□□ 1.61
EDC3-215ENST00000569007 NGDNQ8NEJ9 315 aaKnown RBP25.09■■□□□ 1.61
EDC3-215ENST00000569007 GPRASP1Q5JY77 1395 aa25.08■■□□□ 1.61
EDC3-215ENST00000569007 LMOD2Q6P5Q4 547 aa25.08■■□□□ 1.61
EDC3-215ENST00000569007 ITSN1Q15811 1721 aa25.06■■□□□ 1.6
EDC3-215ENST00000569007 RXRBP28702 533 aa25.06■■□□□ 1.6
EDC3-215ENST00000569007 QRICH2Q9H0J4 1663 aa25.06■■□□□ 1.6
EDC3-215ENST00000569007 ARHGEF10O15013 1369 aa25.05■■□□□ 1.6
EDC3-215ENST00000569007 PLEKHG5O94827 1062 aa25.05■■□□□ 1.6
EDC3-215ENST00000569007 FNBP4Q8N3X1 1017 aaPredicted RBP25.05■■□□□ 1.6
EDC3-215ENST00000569007 QTRT2Q9H974 415 aaKnown RBP25.05■■□□□ 1.6
EDC3-215ENST00000569007 CCDC61Q9Y6R9 512 aa25.05■■□□□ 1.6
EDC3-215ENST00000569007 TRPM3Q9HCF6 1732 aaPredicted RBP25.04■■□□□ 1.6
EDC3-215ENST00000569007 SRPK2P78362 688 aaKnown RBP25.04■■□□□ 1.6
EDC3-215ENST00000569007 CABLES1Q8TDN4 633 aa25.04■■□□□ 1.6
EDC3-215ENST00000569007 USP21Q9UK80 565 aa25.04■■□□□ 1.6
EDC3-215ENST00000569007 CABP2Q9NPB3 220 aa25.02■■□□□ 1.6
EDC3-215ENST00000569007 TOPAZ1Q8N9V7 1692 aa25.01■■□□□ 1.59
EDC3-215ENST00000569007 MARF1Q9Y4F3 1742 aaKnown RBP25.01■■□□□ 1.59
EDC3-215ENST00000569007 HAP1P54257 671 aaPredicted RBP25.01■■□□□ 1.59
EDC3-215ENST00000569007 PCGF6Q9BYE7 350 aa25.01■■□□□ 1.59
EDC3-215ENST00000569007 PAK3O75914 559 aaPredicted RBP25■■□□□ 1.59
EDC3-215ENST00000569007 PLEKHG3A1L390 1219 aa24.99■■□□□ 1.59
EDC3-215ENST00000569007 ACEP12821 1306 aa24.99■■□□□ 1.59
EDC3-215ENST00000569007 RBM6P78332 1123 aaKnown RBP24.99■■□□□ 1.59
EDC3-215ENST00000569007 RALGAPBQ86X10 1494 aa24.99■■□□□ 1.59
EDC3-215ENST00000569007 ALS2Q96Q42 1657 aa24.98■■□□□ 1.59
EDC3-215ENST00000569007 POLR3AO14802 1390 aaPredicted RBP24.98■■□□□ 1.59
EDC3-215ENST00000569007 CARD11Q9BXL7 1154 aa24.98■■□□□ 1.59
EDC3-215ENST00000569007 TRPC5Q9UL62 973 aaPredicted RBP24.97■■□□□ 1.59
EDC3-215ENST00000569007 BCL9LQ86UU0 1499 aa24.96■■□□□ 1.59
EDC3-215ENST00000569007 CDK12Q9NYV4 1490 aaPredicted RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms