RNA–Protein interactions for RNA: ENST00000568151.1

SPG7-217, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 4

Gene SPG7, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-217ENST00000568151 SIRT1Q96EB6 747 aa33.15■■■□□ 2.9
SPG7-217ENST00000568151 JCADQ9P266 1359 aa33.14■■■□□ 2.9
SPG7-217ENST00000568151 TRIM26Q12899 539 aaPredicted RBP33.14■■■□□ 2.9
SPG7-217ENST00000568151 DLC1Q96QB1 1528 aa33.09■■■□□ 2.89
SPG7-217ENST00000568151 ORAI2Q96SN7 254 aa33.08■■■□□ 2.89
SPG7-217ENST00000568151 DDX17Q92841 729 aaKnown RBP33.07■■■□□ 2.88
SPG7-217ENST00000568151 PRAM1Q96QH2 718 aa33.05■■■□□ 2.88
SPG7-217ENST00000568151 PHF23Q9BUL5 403 aaPredicted RBP33.05■■■□□ 2.88
SPG7-217ENST00000568151 SHPRHQ149N8 1683 aa33.04■■■□□ 2.88
SPG7-217ENST00000568151 SIN3AQ96ST3 1273 aa33.04■■■□□ 2.88
SPG7-217ENST00000568151 FMN2Q9NZ56 1722 aa33.03■■■□□ 2.88
SPG7-217ENST00000568151 TRAK1Q9UPV9 953 aa33.01■■■□□ 2.87
SPG7-217ENST00000568151 SAFB2Q14151 953 aaKnown RBP eCLIP33■■■□□ 2.875e-8■□□□□ 11
SPG7-217ENST00000568151 KIAA1210Q9ULL0 1709 aa32.99■■■□□ 2.87
SPG7-217ENST00000568151 NUTM2FA1L443 756 aa32.98■■■□□ 2.87
SPG7-217ENST00000568151 POGKQ9P215 609 aa32.98■■■□□ 2.87
SPG7-217ENST00000568151 SPATA31A6Q5VVP1 1343 aa32.98■■■□□ 2.87
SPG7-217ENST00000568151 ESCO1Q5FWF5 840 aa32.97■■■□□ 2.87
SPG7-217ENST00000568151 RGS17Q9UGC6 210 aaPredicted RBP32.97■■■□□ 2.87
SPG7-217ENST00000568151 LRP6O75581 1613 aa32.96■■■□□ 2.87
SPG7-217ENST00000568151 LRRC59Q96AG4 307 aaKnown RBP32.96■■■□□ 2.87
SPG7-217ENST00000568151 L3MBTL2Q969R5 705 aa32.95■■■□□ 2.87
SPG7-217ENST00000568151 SOS2Q07890 1332 aaPredicted RBP32.94■■■□□ 2.86
SPG7-217ENST00000568151 NEUROD1Q13562 356 aa32.93■■■□□ 2.86
SPG7-217ENST00000568151 ARHGEF28Q8N1W1 1705 aaKnown RBP32.93■■■□□ 2.86
SPG7-217ENST00000568151 ADGRB2O60241 1585 aa32.92■■■□□ 2.86
SPG7-217ENST00000568151 RGPD8O14715 1765 aaPredicted RBP32.91■■■□□ 2.86
SPG7-217ENST00000568151 PNPLA6Q8IY17 1366 aa32.89■■■□□ 2.86
SPG7-217ENST00000568151 NBPF1Q3BBV0 1214 aa32.89■■■□□ 2.86
SPG7-217ENST00000568151 NPHP3Q7Z494 1330 aa32.87■■■□□ 2.85
SPG7-217ENST00000568151 PXDNQ92626 1479 aa32.86■■■□□ 2.85
SPG7-217ENST00000568151 FOXO3O43524 673 aa32.86■■■□□ 2.85
SPG7-217ENST00000568151 HIRIP3Q9BW71 556 aaPredicted RBP32.86■■■□□ 2.85
SPG7-217ENST00000568151 MINK1Q8N4C8 1332 aaPredicted RBP32.85■■■□□ 2.85
SPG7-217ENST00000568151 KIF1AQ12756 1690 aa32.85■■■□□ 2.85
SPG7-217ENST00000568151 USP32Q8NFA0 1604 aa32.84■■■□□ 2.85
SPG7-217ENST00000568151 NUTM2BA6NNL0 878 aaPredicted RBP32.83■■■□□ 2.85
SPG7-217ENST00000568151 NUTM2EB1AL46 878 aaPredicted RBP32.83■■■□□ 2.85
SPG7-217ENST00000568151 NUTM2AQ8IVF1 878 aaPredicted RBP32.83■■■□□ 2.85
SPG7-217ENST00000568151 XPCQ01831 940 aaPredicted RBP32.81■■■□□ 2.84
SPG7-217ENST00000568151 ANKARQ7Z5J8 1434 aa32.8■■■□□ 2.84
SPG7-217ENST00000568151 MEX3CQ5U5Q3 659 aaKnown RBP32.8■■■□□ 2.84
SPG7-217ENST00000568151 SOCS7O14512 581 aa32.79■■■□□ 2.84
SPG7-217ENST00000568151 POTEAQ6S8J7 498 aa32.78■■■□□ 2.84
SPG7-217ENST00000568151 PHF8Q9UPP1 1060 aa32.78■■■□□ 2.84
SPG7-217ENST00000568151 WASLO00401 505 aaPredicted RBP32.77■■■□□ 2.84
SPG7-217ENST00000568151 TRPM1Q7Z4N2 1603 aa32.77■■■□□ 2.84
SPG7-217ENST00000568151 COL22A1Q8NFW1 1626 aaPredicted RBP32.76■■■□□ 2.83
SPG7-217ENST00000568151 PRR36Q9H6K5 1346 aa32.76■■■□□ 2.83
SPG7-217ENST00000568151 TULP4Q9NRJ4 1543 aa32.75■■■□□ 2.83
SPG7-217ENST00000568151 EIF3AQ14152 1382 aaKnown RBP32.73■■■□□ 2.83
SPG7-217ENST00000568151 KRT28Q7Z3Y7 464 aa32.71■■■□□ 2.83
SPG7-217ENST00000568151 PMFBP1Q8TBY8 1022 aa32.69■■■□□ 2.82
SPG7-217ENST00000568151 NBPF8Q3BBV2 869 aa32.68■■■□□ 2.82
SPG7-217ENST00000568151 SPATA31A3Q5VYP0 1347 aa32.67■■■□□ 2.82
SPG7-217ENST00000568151 ATP7BP35670 1465 aa32.66■■■□□ 2.82
SPG7-217ENST00000568151 CENPJQ9HC77 1338 aaPredicted RBP32.65■■■□□ 2.82
SPG7-217ENST00000568151 TONSLQ96HA7 1378 aa32.65■■■□□ 2.82
SPG7-217ENST00000568151 ADAMTS2O95450 1211 aa32.64■■■□□ 2.82
SPG7-217ENST00000568151 ZNF772Q68DY9 489 aaPredicted RBP32.64■■■□□ 2.82
SPG7-217ENST00000568151 CDK19Q9BWU1 502 aa32.64■■■□□ 2.82
SPG7-217ENST00000568151 ROCK2O75116 1388 aaKnown RBP32.63■■■□□ 2.81
SPG7-217ENST00000568151 AFF2P51816 1311 aa32.63■■■□□ 2.81
SPG7-217ENST00000568151 C8orf37Q96NL8 207 aa32.63■■■□□ 2.81
SPG7-217ENST00000568151 PSME1Q06323 249 aa32.62■■■□□ 2.81
SPG7-217ENST00000568151 NUDT16Q96DE0 195 aaKnown RBP32.62■■■□□ 2.81
SPG7-217ENST00000568151 QRICH2Q9H0J4 1663 aa32.62■■■□□ 2.81
SPG7-217ENST00000568151 TNS3Q68CZ2 1445 aa32.61■■■□□ 2.81
SPG7-217ENST00000568151 SBNO1A3KN83 1393 aa32.61■■■□□ 2.81
SPG7-217ENST00000568151 ITSN1Q15811 1721 aa32.61■■■□□ 2.81
SPG7-217ENST00000568151 TRPM3Q9HCF6 1732 aaPredicted RBP32.58■■■□□ 2.81
SPG7-217ENST00000568151 GPRASP1Q5JY77 1395 aa32.58■■■□□ 2.81
SPG7-217ENST00000568151 TOPAZ1Q8N9V7 1692 aa32.56■■■□□ 2.8
SPG7-217ENST00000568151 PCGF6Q9BYE7 350 aa32.56■■■□□ 2.8
SPG7-217ENST00000568151 MARF1Q9Y4F3 1742 aaKnown RBP32.55■■■□□ 2.8
SPG7-217ENST00000568151 NGLY1Q96IV0 654 aa32.55■■■□□ 2.8
SPG7-217ENST00000568151 NGDNQ8NEJ9 315 aaKnown RBP32.53■■■□□ 2.8
SPG7-217ENST00000568151 RALGAPBQ86X10 1494 aa32.51■■■□□ 2.79
SPG7-217ENST00000568151 CCDC61Q9Y6R9 512 aa32.51■■■□□ 2.79
SPG7-217ENST00000568151 ALS2Q96Q42 1657 aa32.5■■■□□ 2.79
SPG7-217ENST00000568151 ARHGEF10O15013 1369 aa32.5■■■□□ 2.79
SPG7-217ENST00000568151 LMOD2Q6P5Q4 547 aa32.49■■■□□ 2.79
SPG7-217ENST00000568151 SRPK2P78362 688 aaKnown RBP32.48■■■□□ 2.79
SPG7-217ENST00000568151 FNBP4Q8N3X1 1017 aaPredicted RBP32.48■■■□□ 2.79
SPG7-217ENST00000568151 CABP2Q9NPB3 220 aa32.48■■■□□ 2.79
SPG7-217ENST00000568151 CABLES1Q8TDN4 633 aa32.47■■■□□ 2.79
SPG7-217ENST00000568151 ABCA3Q99758 1704 aa32.47■■■□□ 2.79
SPG7-217ENST00000568151 POLR3AO14802 1390 aaPredicted RBP32.46■■■□□ 2.79
SPG7-217ENST00000568151 PLEKHG3A1L390 1219 aa32.46■■■□□ 2.79
SPG7-217ENST00000568151 CARD11Q9BXL7 1154 aa32.45■■■□□ 2.79
SPG7-217ENST00000568151 QTRT2Q9H974 415 aaKnown RBP32.45■■■□□ 2.79
SPG7-217ENST00000568151 RXRBP28702 533 aa32.44■■■□□ 2.78
SPG7-217ENST00000568151 USP21Q9UK80 565 aa32.44■■■□□ 2.78
SPG7-217ENST00000568151 ACEP12821 1306 aa32.44■■■□□ 2.78
SPG7-217ENST00000568151 PLEKHG5O94827 1062 aa32.43■■■□□ 2.78
SPG7-217ENST00000568151 PPIP5K1Q6PFW1 1433 aa32.42■■■□□ 2.78
SPG7-217ENST00000568151 EVC2Q86UK5 1308 aa32.41■■■□□ 2.78
SPG7-217ENST00000568151 BCL9LQ86UU0 1499 aa32.4■■■□□ 2.78
SPG7-217ENST00000568151 PAK3O75914 559 aaPredicted RBP32.39■■■□□ 2.78
SPG7-217ENST00000568151 HAP1P54257 671 aaPredicted RBP32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms