RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 ATP7AQ04656 1500 aa14.24□□□□□ -0.13
TCF4-232ENST00000566286 GOLGA2Q08379 1002 aa14.23□□□□□ -0.13
TCF4-232ENST00000566286 KNSTRNQ9Y448 316 aa14.23□□□□□ -0.13
TCF4-232ENST00000566286 ZNF521Q96K83 1311 aa14.23□□□□□ -0.13
TCF4-232ENST00000566286 SYNMO15061 1565 aa14.23□□□□□ -0.13
TCF4-232ENST00000566286 PLEKHH1Q9ULM0 1364 aa14.23□□□□□ -0.13
TCF4-232ENST00000566286 SCAPERQ9BY12 1400 aa14.22□□□□□ -0.13
TCF4-232ENST00000566286 CDCA8Q53HL2 280 aa14.22□□□□□ -0.13
TCF4-232ENST00000566286 IQGAP1P46940 1657 aa14.22□□□□□ -0.13
TCF4-232ENST00000566286 PIK3C2GO75747 1445 aa14.22□□□□□ -0.13
TCF4-232ENST00000566286 PPP2R1AP30153 589 aa14.21□□□□□ -0.13
TCF4-232ENST00000566286 SKAP1Q86WV1 359 aa14.21□□□□□ -0.13
TCF4-232ENST00000566286 C8orf34Q49A92 452 aa14.21□□□□□ -0.13
TCF4-232ENST00000566286 DEPDC5O75140 1603 aa14.21□□□□□ -0.14
TCF4-232ENST00000566286 CFAP74Q9C0B2 1584 aa14.19□□□□□ -0.14
TCF4-232ENST00000566286 ASXL1Q8IXJ9 1541 aa14.19□□□□□ -0.14
TCF4-232ENST00000566286 ANO8Q9HCE9 1232 aaPredicted RBP14.19□□□□□ -0.14
TCF4-232ENST00000566286 VIRMAQ69YN4 1812 aaKnown RBP14.19□□□□□ -0.14
TCF4-232ENST00000566286 MADDQ8WXG6 1647 aa14.19□□□□□ -0.14
TCF4-232ENST00000566286 NPC1L1Q9UHC9 1359 aa14.19□□□□□ -0.14
TCF4-232ENST00000566286 KCTD17Q8N5Z5 321 aa14.18□□□□□ -0.14
TCF4-232ENST00000566286 SLFN5Q08AF3 891 aa14.18□□□□□ -0.14
TCF4-232ENST00000566286 CD109Q6YHK3 1445 aa14.18□□□□□ -0.14
TCF4-232ENST00000566286 STAC3Q96MF2 364 aa14.17□□□□□ -0.14
TCF4-232ENST00000566286 KIDINS220Q9ULH0 1771 aa14.17□□□□□ -0.14
TCF4-232ENST00000566286 NKTRP30414 1462 aaKnown RBP14.16□□□□□ -0.14
TCF4-232ENST00000566286 TRMT2AQ8IZ69 625 aaKnown RBP14.16□□□□□ -0.14
TCF4-232ENST00000566286 SPHKAPQ2M3C7 1700 aa14.16□□□□□ -0.14
TCF4-232ENST00000566286 SLC4A3P48751 1232 aa14.15□□□□□ -0.14
TCF4-232ENST00000566286 NGEFQ8N5V2 710 aa14.15□□□□□ -0.14
TCF4-232ENST00000566286 ZNF518AQ6AHZ1 1483 aa14.15□□□□□ -0.14
TCF4-232ENST00000566286 SCAF11Q99590 1463 aaKnown RBP14.15□□□□□ -0.14
TCF4-232ENST00000566286 VWDEQ8N2E2 1590 aa14.15□□□□□ -0.14
TCF4-232ENST00000566286 FRAT1Q92837 279 aaPredicted RBP14.14□□□□□ -0.15
TCF4-232ENST00000566286 GPBP1L1Q9HC44 474 aaPredicted RBP14.14□□□□□ -0.15
TCF4-232ENST00000566286 MROH1Q8NDA8 1641 aa14.14□□□□□ -0.15
TCF4-232ENST00000566286 NINLQ9Y2I6 1382 aa14.14□□□□□ -0.15
TCF4-232ENST00000566286 TET3O43151 1660 aa14.14□□□□□ -0.15
TCF4-232ENST00000566286 MYOM1P52179 1685 aa14.14□□□□□ -0.15
TCF4-232ENST00000566286 POGZQ7Z3K3 1410 aa14.14□□□□□ -0.15
TCF4-232ENST00000566286 RAD21O60216 631 aa14.13□□□□□ -0.15
TCF4-232ENST00000566286 STAG3Q9UJ98 1225 aa14.13□□□□□ -0.15
TCF4-232ENST00000566286 CEP152O94986 1710 aa14.13□□□□□ -0.15
TCF4-232ENST00000566286 E9PSI1 815 aa14.12□□□□□ -0.15
TCF4-232ENST00000566286 RGS3P49796 1198 aa14.12□□□□□ -0.15
TCF4-232ENST00000566286 BRPF3Q9ULD4 1205 aa14.12□□□□□ -0.15
TCF4-232ENST00000566286 RIMBP3CA6NJZ7 1639 aa14.12□□□□□ -0.15
TCF4-232ENST00000566286 RIMBP3BA6NNM3 1639 aa14.12□□□□□ -0.15
TCF4-232ENST00000566286 RIMBP3Q9UFD9 1639 aa14.12□□□□□ -0.15
TCF4-232ENST00000566286 KDM5AP29375 1690 aaKnown RBP14.12□□□□□ -0.15
TCF4-232ENST00000566286 TRPM2O94759 1503 aa14.12□□□□□ -0.15
TCF4-232ENST00000566286 CGNL1Q0VF96 1302 aa14.11□□□□□ -0.15
TCF4-232ENST00000566286 KIAA1210Q9ULL0 1709 aa14.11□□□□□ -0.15
TCF4-232ENST00000566286 MKRN3Q13064 507 aaKnown RBP14.1□□□□□ -0.15
TCF4-232ENST00000566286 WDR70Q9NW82 654 aa14.1□□□□□ -0.15
TCF4-232ENST00000566286 MAPK8IP3Q9UPT6 1336 aa14.1□□□□□ -0.15
TCF4-232ENST00000566286 NEO1Q92859 1461 aa14.1□□□□□ -0.15
TCF4-232ENST00000566286 PTPRTO14522 1441 aa14.09□□□□□ -0.15
TCF4-232ENST00000566286 MLH3Q9UHC1 1453 aa14.09□□□□□ -0.15
TCF4-232ENST00000566286 HECW2Q9P2P5 1572 aa14.09□□□□□ -0.15
TCF4-232ENST00000566286 MAP3K4Q9Y6R4 1608 aa14.09□□□□□ -0.15
TCF4-232ENST00000566286 FRAT2O75474 233 aaPredicted RBP14.09□□□□□ -0.15
TCF4-232ENST00000566286 PDE3AQ14432 1141 aa14.09□□□□□ -0.15
TCF4-232ENST00000566286 KIF3BO15066 747 aa14.08□□□□□ -0.16
TCF4-232ENST00000566286 KANK1Q14678 1352 aa14.08□□□□□ -0.16
TCF4-232ENST00000566286 STK25O00506 426 aa14.08□□□□□ -0.16
TCF4-232ENST00000566286 APAF1O14727 1248 aa14.08□□□□□ -0.16
TCF4-232ENST00000566286 FRMPD1Q5SYB0 1578 aa14.07□□□□□ -0.16
TCF4-232ENST00000566286 ZMYND10O75800 440 aa14.07□□□□□ -0.16
TCF4-232ENST00000566286 BECN1Q14457 450 aa14.07□□□□□ -0.16
TCF4-232ENST00000566286 CYB5RLQ6IPT4 315 aa14.07□□□□□ -0.16
TCF4-232ENST00000566286 CLTCL1P53675 1640 aa14.07□□□□□ -0.16
TCF4-232ENST00000566286 CCDC146Q8IYE0 955 aa14.06□□□□□ -0.16
TCF4-232ENST00000566286 GLI2P10070 1586 aa14.06□□□□□ -0.16
TCF4-232ENST00000566286 BCAR3O75815 825 aa14.06□□□□□ -0.16
TCF4-232ENST00000566286 AAMPQ13685 434 aa14.06□□□□□ -0.16
TCF4-232ENST00000566286 ABCA6Q8N139 1617 aa14.06□□□□□ -0.16
TCF4-232ENST00000566286 NEURL4Q96JN8 1562 aa14.06□□□□□ -0.16
TCF4-232ENST00000566286 SPINK5Q9NQ38 1064 aaPredicted RBP14.05□□□□□ -0.16
TCF4-232ENST00000566286 ZMYM3Q14202 1370 aa14.05□□□□□ -0.16
TCF4-232ENST00000566286 RGS22Q8NE09 1264 aa14.05□□□□□ -0.16
TCF4-232ENST00000566286 CLUAP1Q96AJ1 413 aa14.05□□□□□ -0.16
TCF4-232ENST00000566286 EFCAB6Q5THR3 1501 aa14.05□□□□□ -0.16
TCF4-232ENST00000566286 CENPJQ9HC77 1338 aaPredicted RBP14.04□□□□□ -0.16
TCF4-232ENST00000566286 LMTK2Q8IWU2 1503 aa14.04□□□□□ -0.16
TCF4-232ENST00000566286 CCDC82Q8N4S0 544 aa14.04□□□□□ -0.16
TCF4-232ENST00000566286 PPRC1Q5VV67 1664 aaKnown RBP14.04□□□□□ -0.16
TCF4-232ENST00000566286 USP19O94966 1318 aa14.04□□□□□ -0.16
TCF4-232ENST00000566286 RICTORQ6R327 1708 aa14.03□□□□□ -0.16
TCF4-232ENST00000566286 IGHDP01880 384 aa14.03□□□□□ -0.16
TCF4-232ENST00000566286 CANXP27824 592 aaKnown RBP14.02□□□□□ -0.16
TCF4-232ENST00000566286 CADPS2Q86UW7 1296 aa14.02□□□□□ -0.16
TCF4-232ENST00000566286 FAM43AQ8N2R8 423 aa14.02□□□□□ -0.16
TCF4-232ENST00000566286 POLR3AO14802 1390 aaPredicted RBP14.02□□□□□ -0.17
TCF4-232ENST00000566286 CDK11BP21127 795 aaKnown RBP14.02□□□□□ -0.17
TCF4-232ENST00000566286 POLA2Q14181 598 aa14.02□□□□□ -0.17
TCF4-232ENST00000566286 MTMR7Q9Y216 660 aa14.02□□□□□ -0.17
TCF4-232ENST00000566286 DCAF8L1A6NGE4 600 aa14.01□□□□□ -0.17
TCF4-232ENST00000566286 RIOK3O14730 519 aaKnown RBP14□□□□□ -0.17
TCF4-232ENST00000566286 PMFBP1Q8TBY8 1022 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms