RNA–Protein interactions for RNA: ENST00000566269.6

MSLN-206, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-206ENST00000566269 COL16A1Q07092 1604 aaPredicted RBP25.55■■□□□ 1.68
MSLN-206ENST00000566269 DLC1Q96QB1 1528 aa25.54■■□□□ 1.68
MSLN-206ENST00000566269 SAFB2Q14151 953 aaKnown RBP eCLIP25.52■■□□□ 1.68
MSLN-206ENST00000566269 SIRT1Q96EB6 747 aa25.52■■□□□ 1.68
MSLN-206ENST00000566269 PRAM1Q96QH2 718 aa25.52■■□□□ 1.68
MSLN-206ENST00000566269 TRAK1Q9UPV9 953 aa25.52■■□□□ 1.68
MSLN-206ENST00000566269 POGKQ9P215 609 aa25.51■■□□□ 1.67
MSLN-206ENST00000566269 NHSL1Q5SYE7 1610 aa25.51■■□□□ 1.67
MSLN-206ENST00000566269 KIAA1210Q9ULL0 1709 aa25.51■■□□□ 1.67
MSLN-206ENST00000566269 L3MBTL2Q969R5 705 aa25.5■■□□□ 1.67
MSLN-206ENST00000566269 JCADQ9P266 1359 aa25.47■■□□□ 1.67
MSLN-206ENST00000566269 FMN2Q9NZ56 1722 aa25.47■■□□□ 1.67
MSLN-206ENST00000566269 NUTM2FA1L443 756 aa25.47■■□□□ 1.67
MSLN-206ENST00000566269 ORAI2Q96SN7 254 aa25.46■■□□□ 1.67
MSLN-206ENST00000566269 ARHGEF28Q8N1W1 1705 aaKnown RBP25.46■■□□□ 1.67
MSLN-206ENST00000566269 DDX17Q92841 729 aaKnown RBP25.45■■□□□ 1.66
MSLN-206ENST00000566269 PCGF6Q9BYE7 350 aa25.43■■□□□ 1.66
MSLN-206ENST00000566269 ESCO1Q5FWF5 840 aa25.42■■□□□ 1.66
MSLN-206ENST00000566269 PHF23Q9BUL5 403 aaPredicted RBP25.42■■□□□ 1.66
MSLN-206ENST00000566269 ADGRB2O60241 1585 aa25.41■■□□□ 1.66
MSLN-206ENST00000566269 SHPRHQ149N8 1683 aa25.4■■□□□ 1.66
MSLN-206ENST00000566269 NBPF1Q3BBV0 1214 aa25.4■■□□□ 1.66
MSLN-206ENST00000566269 MINK1Q8N4C8 1332 aaPredicted RBP25.39■■□□□ 1.66
MSLN-206ENST00000566269 HIRIP3Q9BW71 556 aaPredicted RBP25.39■■□□□ 1.66
MSLN-206ENST00000566269 TONSLQ96HA7 1378 aa25.39■■□□□ 1.65
MSLN-206ENST00000566269 TRPM1Q7Z4N2 1603 aa25.37■■□□□ 1.65
MSLN-206ENST00000566269 LRRC59Q96AG4 307 aaKnown RBP25.35■■□□□ 1.65
MSLN-206ENST00000566269 RGPD8O14715 1765 aaPredicted RBP25.35■■□□□ 1.65
MSLN-206ENST00000566269 KIF1AQ12756 1690 aa25.35■■□□□ 1.65
MSLN-206ENST00000566269 NPHP3Q7Z494 1330 aa25.34■■□□□ 1.65
MSLN-206ENST00000566269 SPATA31A6Q5VVP1 1343 aa25.33■■□□□ 1.64
MSLN-206ENST00000566269 SOS2Q07890 1332 aaPredicted RBP25.32■■□□□ 1.64
MSLN-206ENST00000566269 ROCK2O75116 1388 aaKnown RBP25.31■■□□□ 1.64
MSLN-206ENST00000566269 ANKARQ7Z5J8 1434 aa25.31■■□□□ 1.64
MSLN-206ENST00000566269 LRP6O75581 1613 aa25.31■■□□□ 1.64
MSLN-206ENST00000566269 USP32Q8NFA0 1604 aa25.31■■□□□ 1.64
MSLN-206ENST00000566269 FOXO3O43524 673 aa25.31■■□□□ 1.64
MSLN-206ENST00000566269 EIF3AQ14152 1382 aaKnown RBP25.31■■□□□ 1.64
MSLN-206ENST00000566269 XPCQ01831 940 aaPredicted RBP25.3■■□□□ 1.64
MSLN-206ENST00000566269 PNPLA6Q8IY17 1366 aa25.3■■□□□ 1.64
MSLN-206ENST00000566269 PXDNQ92626 1479 aa25.29■■□□□ 1.64
MSLN-206ENST00000566269 TULP4Q9NRJ4 1543 aa25.29■■□□□ 1.64
MSLN-206ENST00000566269 ILDR2Q71H61 639 aa25.29■■□□□ 1.64
MSLN-206ENST00000566269 NUTM2BA6NNL0 878 aaPredicted RBP25.28■■□□□ 1.64
MSLN-206ENST00000566269 NUTM2EB1AL46 878 aaPredicted RBP25.28■■□□□ 1.64
MSLN-206ENST00000566269 WASLO00401 505 aaPredicted RBP25.28■■□□□ 1.64
MSLN-206ENST00000566269 MEX3CQ5U5Q3 659 aaKnown RBP25.28■■□□□ 1.64
MSLN-206ENST00000566269 NUTM2AQ8IVF1 878 aaPredicted RBP25.28■■□□□ 1.64
MSLN-206ENST00000566269 PHF8Q9UPP1 1060 aa25.28■■□□□ 1.64
MSLN-206ENST00000566269 NBPF8Q3BBV2 869 aa25.27■■□□□ 1.64
MSLN-206ENST00000566269 CENPJQ9HC77 1338 aaPredicted RBP25.26■■□□□ 1.63
MSLN-206ENST00000566269 QRICH2Q9H0J4 1663 aa25.26■■□□□ 1.63
MSLN-206ENST00000566269 PRR36Q9H6K5 1346 aa25.23■■□□□ 1.63
MSLN-206ENST00000566269 PMFBP1Q8TBY8 1022 aa25.23■■□□□ 1.63
MSLN-206ENST00000566269 ITSN1Q15811 1721 aa25.22■■□□□ 1.63
MSLN-206ENST00000566269 ATP7BP35670 1465 aa25.21■■□□□ 1.63
MSLN-206ENST00000566269 RALGAPBQ86X10 1494 aa25.21■■□□□ 1.63
MSLN-206ENST00000566269 KRT28Q7Z3Y7 464 aa25.2■■□□□ 1.62
MSLN-206ENST00000566269 CDK19Q9BWU1 502 aa25.2■■□□□ 1.62
MSLN-206ENST00000566269 GPRASP1Q5JY77 1395 aa25.19■■□□□ 1.62
MSLN-206ENST00000566269 RGS17Q9UGC6 210 aaPredicted RBP25.19■■□□□ 1.62
MSLN-206ENST00000566269 COL22A1Q8NFW1 1626 aaPredicted RBP25.19■■□□□ 1.62
MSLN-206ENST00000566269 PSME1Q06323 249 aa25.17■■□□□ 1.62
MSLN-206ENST00000566269 NUDT16Q96DE0 195 aaKnown RBP25.17■■□□□ 1.62
MSLN-206ENST00000566269 CARD11Q9BXL7 1154 aa25.16■■□□□ 1.62
MSLN-206ENST00000566269 CLSPNQ9HAW4 1339 aa25.15■■□□□ 1.62
MSLN-206ENST00000566269 TNS3Q68CZ2 1445 aa25.15■■□□□ 1.62
MSLN-206ENST00000566269 TOPAZ1Q8N9V7 1692 aa25.15■■□□□ 1.62
MSLN-206ENST00000566269 SPATA31A3Q5VYP0 1347 aa25.14■■□□□ 1.62
MSLN-206ENST00000566269 ADAMTS2O95450 1211 aa25.14■■□□□ 1.62
MSLN-206ENST00000566269 SRPK2P78362 688 aaKnown RBP25.14■■□□□ 1.62
MSLN-206ENST00000566269 NGDNQ8NEJ9 315 aaKnown RBP25.13■■□□□ 1.61
MSLN-206ENST00000566269 CCER1Q8TC90 406 aaPredicted RBP25.12■■□□□ 1.61
MSLN-206ENST00000566269 C8orf37Q96NL8 207 aa25.12■■□□□ 1.61
MSLN-206ENST00000566269 SBNO1A3KN83 1393 aa25.11■■□□□ 1.61
MSLN-206ENST00000566269 LMOD2Q6P5Q4 547 aa25.11■■□□□ 1.61
MSLN-206ENST00000566269 POTEAQ6S8J7 498 aa25.1■■□□□ 1.61
MSLN-206ENST00000566269 CABP2Q9NPB3 220 aa25.1■■□□□ 1.61
MSLN-206ENST00000566269 TRPM3Q9HCF6 1732 aaPredicted RBP25.09■■□□□ 1.61
MSLN-206ENST00000566269 AFF2P51816 1311 aa25.09■■□□□ 1.61
MSLN-206ENST00000566269 ZNF772Q68DY9 489 aaPredicted RBP25.08■■□□□ 1.61
MSLN-206ENST00000566269 CCDC61Q9Y6R9 512 aa25.08■■□□□ 1.61
MSLN-206ENST00000566269 EVC2Q86UK5 1308 aa25.08■■□□□ 1.6
MSLN-206ENST00000566269 ARHGEF10O15013 1369 aa25.07■■□□□ 1.6
MSLN-206ENST00000566269 PLEKHG5O94827 1062 aa25.07■■□□□ 1.6
MSLN-206ENST00000566269 PPIP5K1Q6PFW1 1433 aa25.06■■□□□ 1.6
MSLN-206ENST00000566269 NGLY1Q96IV0 654 aa25.05■■□□□ 1.6
MSLN-206ENST00000566269 PAK3O75914 559 aaPredicted RBP25.04■■□□□ 1.6
MSLN-206ENST00000566269 HAP1P54257 671 aaPredicted RBP25.04■■□□□ 1.6
MSLN-206ENST00000566269 ALS2Q96Q42 1657 aa25.04■■□□□ 1.6
MSLN-206ENST00000566269 MARF1Q9Y4F3 1742 aaKnown RBP25.03■■□□□ 1.6
MSLN-206ENST00000566269 ACEP12821 1306 aa25.03■■□□□ 1.6
MSLN-206ENST00000566269 POLR3AO14802 1390 aaPredicted RBP25.03■■□□□ 1.6
MSLN-206ENST00000566269 TIMELESSQ9UNS1 1208 aa25.02■■□□□ 1.6
MSLN-206ENST00000566269 ABCA3Q99758 1704 aa25.02■■□□□ 1.6
MSLN-206ENST00000566269 PLEKHG3A1L390 1219 aa25.01■■□□□ 1.59
MSLN-206ENST00000566269 SOCS7O14512 581 aa25.01■■□□□ 1.59
MSLN-206ENST00000566269 CABLES1Q8TDN4 633 aa25.01■■□□□ 1.59
MSLN-206ENST00000566269 SBNO2Q9Y2G9 1366 aa25.01■■□□□ 1.59
MSLN-206ENST00000566269 CABP1Q9NZU7 370 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms