RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 SAFB2Q14151 953 aaKnown RBP eCLIP26.03■■□□□ 1.76
TRADD-205ENST00000566247 TONSLQ96HA7 1378 aa26.03■■□□□ 1.76
TRADD-205ENST00000566247 CDC42BPGQ6DT37 1551 aa26.03■■□□□ 1.76
TRADD-205ENST00000566247 BRINP3Q76B58 766 aa26.02■■□□□ 1.76
TRADD-205ENST00000566247 KIAA1210Q9ULL0 1709 aa26■■□□□ 1.75
TRADD-205ENST00000566247 C1orf167Q5SNV9 1468 aa26■■□□□ 1.75
TRADD-205ENST00000566247 PHLPP1O60346 1717 aa25.98■■□□□ 1.75
TRADD-205ENST00000566247 NBPF1Q3BBV0 1214 aa25.96■■□□□ 1.75
TRADD-205ENST00000566247 AHDC1Q5TGY3 1603 aaPredicted RBP25.95■■□□□ 1.74
TRADD-205ENST00000566247 NUTM2FA1L443 756 aa25.94■■□□□ 1.74
TRADD-205ENST00000566247 ORAI2Q96SN7 254 aa25.93■■□□□ 1.74
TRADD-205ENST00000566247 MINK1Q8N4C8 1332 aaPredicted RBP25.91■■□□□ 1.74
TRADD-205ENST00000566247 ESCO1Q5FWF5 840 aa25.91■■□□□ 1.74
TRADD-205ENST00000566247 COL16A1Q07092 1604 aaPredicted RBP25.9■■□□□ 1.74
TRADD-205ENST00000566247 HIRIP3Q9BW71 556 aaPredicted RBP25.9■■□□□ 1.74
TRADD-205ENST00000566247 ARHGEF28Q8N1W1 1705 aaKnown RBP25.9■■□□□ 1.74
TRADD-205ENST00000566247 FMN2Q9NZ56 1722 aa25.89■■□□□ 1.74
TRADD-205ENST00000566247 ROCK2O75116 1388 aaKnown RBP25.89■■□□□ 1.74
TRADD-205ENST00000566247 DISP3Q9P2K9 1392 aa25.89■■□□□ 1.74
TRADD-205ENST00000566247 JCADQ9P266 1359 aa25.88■■□□□ 1.73
TRADD-205ENST00000566247 DDX17Q92841 729 aaKnown RBP25.88■■□□□ 1.73
TRADD-205ENST00000566247 TRPM1Q7Z4N2 1603 aa25.88■■□□□ 1.73
TRADD-205ENST00000566247 NHSL1Q5SYE7 1610 aa25.87■■□□□ 1.73
TRADD-205ENST00000566247 ADGRB2O60241 1585 aa25.86■■□□□ 1.73
TRADD-205ENST00000566247 MED1Q15648 1581 aaPredicted RBP25.86■■□□□ 1.73
TRADD-205ENST00000566247 CLSPNQ9HAW4 1339 aa25.86■■□□□ 1.73
TRADD-205ENST00000566247 NBPF8Q3BBV2 869 aa25.85■■□□□ 1.73
TRADD-205ENST00000566247 CCER1Q8TC90 406 aaPredicted RBP25.84■■□□□ 1.73
TRADD-205ENST00000566247 EIF3AQ14152 1382 aaKnown RBP25.83■■□□□ 1.73
TRADD-205ENST00000566247 NPHP3Q7Z494 1330 aa25.82■■□□□ 1.72
TRADD-205ENST00000566247 CENPJQ9HC77 1338 aaPredicted RBP25.82■■□□□ 1.72
TRADD-205ENST00000566247 WASLO00401 505 aaPredicted RBP25.81■■□□□ 1.72
TRADD-205ENST00000566247 LRRC59Q96AG4 307 aaKnown RBP25.81■■□□□ 1.72
TRADD-205ENST00000566247 ANKARQ7Z5J8 1434 aa25.8■■□□□ 1.72
TRADD-205ENST00000566247 FOXO3O43524 673 aa25.79■■□□□ 1.72
TRADD-205ENST00000566247 PHF23Q9BUL5 403 aaPredicted RBP25.78■■□□□ 1.72
TRADD-205ENST00000566247 KIF1AQ12756 1690 aa25.77■■□□□ 1.72
TRADD-205ENST00000566247 PHF8Q9UPP1 1060 aa25.77■■□□□ 1.72
TRADD-205ENST00000566247 SOS2Q07890 1332 aaPredicted RBP25.77■■□□□ 1.72
TRADD-205ENST00000566247 RALGAPBQ86X10 1494 aa25.77■■□□□ 1.72
TRADD-205ENST00000566247 TULP4Q9NRJ4 1543 aa25.77■■□□□ 1.72
TRADD-205ENST00000566247 CARD11Q9BXL7 1154 aa25.76■■□□□ 1.71
TRADD-205ENST00000566247 SPATA31A6Q5VVP1 1343 aa25.76■■□□□ 1.71
TRADD-205ENST00000566247 GPRASP1Q5JY77 1395 aa25.76■■□□□ 1.71
TRADD-205ENST00000566247 SHPRHQ149N8 1683 aa25.75■■□□□ 1.71
TRADD-205ENST00000566247 XPCQ01831 940 aaPredicted RBP25.75■■□□□ 1.71
TRADD-205ENST00000566247 CDK19Q9BWU1 502 aa25.74■■□□□ 1.71
TRADD-205ENST00000566247 USP32Q8NFA0 1604 aa25.73■■□□□ 1.71
TRADD-205ENST00000566247 RGPD8O14715 1765 aaPredicted RBP25.72■■□□□ 1.71
TRADD-205ENST00000566247 PRR36Q9H6K5 1346 aa25.72■■□□□ 1.71
TRADD-205ENST00000566247 QRICH2Q9H0J4 1663 aa25.72■■□□□ 1.71
TRADD-205ENST00000566247 PMFBP1Q8TBY8 1022 aa25.72■■□□□ 1.71
TRADD-205ENST00000566247 TIMELESSQ9UNS1 1208 aa25.72■■□□□ 1.71
TRADD-205ENST00000566247 PXDNQ92626 1479 aa25.72■■□□□ 1.71
TRADD-205ENST00000566247 PNPLA6Q8IY17 1366 aa25.71■■□□□ 1.71
TRADD-205ENST00000566247 NUTM2BA6NNL0 878 aaPredicted RBP25.7■■□□□ 1.7
TRADD-205ENST00000566247 NUTM2EB1AL46 878 aaPredicted RBP25.7■■□□□ 1.7
TRADD-205ENST00000566247 MEX3CQ5U5Q3 659 aaKnown RBP25.7■■□□□ 1.7
TRADD-205ENST00000566247 NUTM2AQ8IVF1 878 aaPredicted RBP25.7■■□□□ 1.7
TRADD-205ENST00000566247 SRPK2P78362 688 aaKnown RBP25.69■■□□□ 1.7
TRADD-205ENST00000566247 KRT28Q7Z3Y7 464 aa25.69■■□□□ 1.7
TRADD-205ENST00000566247 NUDT16Q96DE0 195 aaKnown RBP25.69■■□□□ 1.7
TRADD-205ENST00000566247 ATP7BP35670 1465 aa25.68■■□□□ 1.7
TRADD-205ENST00000566247 PSME1Q06323 249 aa25.68■■□□□ 1.7
TRADD-205ENST00000566247 LRP6O75581 1613 aa25.66■■□□□ 1.7
TRADD-205ENST00000566247 NGDNQ8NEJ9 315 aaKnown RBP25.65■■□□□ 1.7
TRADD-205ENST00000566247 EVC2Q86UK5 1308 aa25.64■■□□□ 1.7
TRADD-205ENST00000566247 ITSN1Q15811 1721 aa25.64■■□□□ 1.7
TRADD-205ENST00000566247 CABP2Q9NPB3 220 aa25.63■■□□□ 1.69
TRADD-205ENST00000566247 CCDC61Q9Y6R9 512 aa25.62■■□□□ 1.69
TRADD-205ENST00000566247 SPATA31A3Q5VYP0 1347 aa25.61■■□□□ 1.69
TRADD-205ENST00000566247 TNS3Q68CZ2 1445 aa25.6■■□□□ 1.69
TRADD-205ENST00000566247 SBNO1A3KN83 1393 aa25.59■■□□□ 1.69
TRADD-205ENST00000566247 LMOD2Q6P5Q4 547 aa25.59■■□□□ 1.69
TRADD-205ENST00000566247 COL22A1Q8NFW1 1626 aaPredicted RBP25.57■■□□□ 1.68
TRADD-205ENST00000566247 TOPAZ1Q8N9V7 1692 aa25.57■■□□□ 1.68
TRADD-205ENST00000566247 SBNO2Q9Y2G9 1366 aa25.56■■□□□ 1.68
TRADD-205ENST00000566247 PPIP5K1Q6PFW1 1433 aa25.56■■□□□ 1.68
TRADD-205ENST00000566247 ADAMTS2O95450 1211 aa25.56■■□□□ 1.68
TRADD-205ENST00000566247 ARHGEF10O15013 1369 aa25.55■■□□□ 1.68
TRADD-205ENST00000566247 PLEKHG3A1L390 1219 aa25.54■■□□□ 1.68
TRADD-205ENST00000566247 PAK3O75914 559 aaPredicted RBP25.54■■□□□ 1.68
TRADD-205ENST00000566247 C8orf37Q96NL8 207 aa25.54■■□□□ 1.68
TRADD-205ENST00000566247 RGS17Q9UGC6 210 aaPredicted RBP25.54■■□□□ 1.68
TRADD-205ENST00000566247 ACEP12821 1306 aa25.54■■□□□ 1.68
TRADD-205ENST00000566247 PLEKHG5O94827 1062 aa25.53■■□□□ 1.68
TRADD-205ENST00000566247 ILDR2Q71H61 639 aa25.53■■□□□ 1.68
TRADD-205ENST00000566247 HAP1P54257 671 aaPredicted RBP25.52■■□□□ 1.68
TRADD-205ENST00000566247 POLR3AO14802 1390 aaPredicted RBP25.52■■□□□ 1.68
TRADD-205ENST00000566247 ST20-MTHFSA0A0A6YYL1 179 aa25.51■■□□□ 1.67
TRADD-205ENST00000566247 USP47Q96K76 1375 aa25.51■■□□□ 1.67
TRADD-205ENST00000566247 ATAD2Q6PL18 1390 aa25.5■■□□□ 1.67
TRADD-205ENST00000566247 TRPM3Q9HCF6 1732 aaPredicted RBP25.5■■□□□ 1.67
TRADD-205ENST00000566247 CABP1Q9NZU7 370 aa25.5■■□□□ 1.67
TRADD-205ENST00000566247 AFF2P51816 1311 aa25.48■■□□□ 1.67
TRADD-205ENST00000566247 ZNF772Q68DY9 489 aaPredicted RBP25.48■■□□□ 1.67
TRADD-205ENST00000566247 NGLY1Q96IV0 654 aa25.48■■□□□ 1.67
TRADD-205ENST00000566247 SLC24A1O60721 1099 aa25.46■■□□□ 1.67
TRADD-205ENST00000566247 POTEAQ6S8J7 498 aa25.45■■□□□ 1.66
TRADD-205ENST00000566247 CABLES1Q8TDN4 633 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms