RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 MTUS2Q5JR59 1369 aa13.34□□□□□ -0.27
CDH13-207ENST00000565636 PDE4AP27815 886 aa13.34□□□□□ -0.27
CDH13-207ENST00000565636 CAMSAP1Q5T5Y3 1602 aa13.34□□□□□ -0.27
CDH13-207ENST00000565636 CLTCQ00610 1675 aaKnown RBP13.33□□□□□ -0.28
CDH13-207ENST00000565636 PTPRKQ15262 1439 aa13.32□□□□□ -0.28
CDH13-207ENST00000565636 CEP162Q5TB80 1403 aa13.32□□□□□ -0.28
CDH13-207ENST00000565636 DHX29Q7Z478 1369 aaKnown RBP13.32□□□□□ -0.28
CDH13-207ENST00000565636 MBD5Q9P267 1494 aa13.31□□□□□ -0.28
CDH13-207ENST00000565636 EHBP1L1Q8N3D4 1523 aa13.31□□□□□ -0.28
CDH13-207ENST00000565636 TCOF1Q13428 1488 aaKnown RBP13.3□□□□□ -0.28
CDH13-207ENST00000565636 CRISPLD2Q9H0B8 497 aa13.3□□□□□ -0.28
CDH13-207ENST00000565636 CEP170BQ9Y4F5 1589 aaPredicted RBP13.29□□□□□ -0.28
CDH13-207ENST00000565636 MYO3AQ8NEV4 1616 aa13.29□□□□□ -0.28
CDH13-207ENST00000565636 GTPBP6O43824 516 aaPredicted RBP13.29□□□□□ -0.28
CDH13-207ENST00000565636 PPP4R3BQ5MIZ7 849 aa13.29□□□□□ -0.28
CDH13-207ENST00000565636 ARHGAP33O14559 1287 aa13.28□□□□□ -0.28
CDH13-207ENST00000565636 PPP1R15BQ5SWA1 713 aa13.28□□□□□ -0.28
CDH13-207ENST00000565636 GGT6Q6P531 493 aa13.28□□□□□ -0.28
CDH13-207ENST00000565636 A2ML1A8K2U0 1454 aa13.28□□□□□ -0.28
CDH13-207ENST00000565636 TIAM1Q13009 1591 aa13.28□□□□□ -0.28
CDH13-207ENST00000565636 SOCS7O14512 581 aa13.26□□□□□ -0.29
CDH13-207ENST00000565636 AXIN2Q9Y2T1 843 aa13.26□□□□□ -0.29
CDH13-207ENST00000565636 DNMT1P26358 1616 aaKnown RBP13.25□□□□□ -0.29
CDH13-207ENST00000565636 DISP3Q9P2K9 1392 aa13.25□□□□□ -0.29
CDH13-207ENST00000565636 ARHGEF5Q12774 1597 aa13.24□□□□□ -0.29
CDH13-207ENST00000565636 TSPY4P0CV99 314 aa13.24□□□□□ -0.29
CDH13-207ENST00000565636 TSPY10P0CW01 314 aa13.24□□□□□ -0.29
CDH13-207ENST00000565636 THEMISQ8N1K5 641 aaPredicted RBP13.24□□□□□ -0.29
CDH13-207ENST00000565636 OXER1Q8TDS5 423 aa13.24□□□□□ -0.29
CDH13-207ENST00000565636 UPF1Q92900 1129 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDH13-207ENST00000565636 POLR1AO95602 1720 aaPredicted RBP13.24□□□□□ -0.29
CDH13-207ENST00000565636 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
CDH13-207ENST00000565636 NCKAP5LQ9HCH0 1330 aa13.23□□□□□ -0.29
CDH13-207ENST00000565636 PZPP20742 1482 aa13.23□□□□□ -0.29
CDH13-207ENST00000565636 CPS1P31327 1500 aa13.22□□□□□ -0.29
CDH13-207ENST00000565636 NLRP1Q9C000 1473 aa13.22□□□□□ -0.29
CDH13-207ENST00000565636 ZNF644Q9H582 1327 aaPredicted RBP13.21□□□□□ -0.29
CDH13-207ENST00000565636 ANKLE2Q86XL3 938 aa13.21□□□□□ -0.29
CDH13-207ENST00000565636 DDX27Q96GQ7 796 aaKnown RBP13.21□□□□□ -0.29
CDH13-207ENST00000565636 MAP3K1Q13233 1512 aa13.21□□□□□ -0.29
CDH13-207ENST00000565636 KDM5DQ9BY66 1539 aa13.21□□□□□ -0.29
CDH13-207ENST00000565636 DEPDC5O75140 1603 aa13.21□□□□□ -0.3
CDH13-207ENST00000565636 WASHC2CQ9Y4E1 1318 aa13.2□□□□□ -0.3
CDH13-207ENST00000565636 KIF3BO15066 747 aa13.2□□□□□ -0.3
CDH13-207ENST00000565636 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
CDH13-207ENST00000565636 MED14O60244 1454 aa13.2□□□□□ -0.3
CDH13-207ENST00000565636 TNRQ92752 1358 aa13.2□□□□□ -0.3
CDH13-207ENST00000565636 ZC3H13Q5T200 1668 aaKnown RBP13.19□□□□□ -0.3
CDH13-207ENST00000565636 NCOA2Q15596 1464 aa13.19□□□□□ -0.3
CDH13-207ENST00000565636 TOM1O60784 492 aa13.19□□□□□ -0.3
CDH13-207ENST00000565636 POTEEQ6S8J3 1075 aa13.19□□□□□ -0.3
CDH13-207ENST00000565636 MIA2Q96PC5 1412 aa13.19□□□□□ -0.3
CDH13-207ENST00000565636 SPATA31D1Q6ZQQ2 1576 aa13.19□□□□□ -0.3
CDH13-207ENST00000565636 MAST1Q9Y2H9 1570 aa13.19□□□□□ -0.3
CDH13-207ENST00000565636 ZNF335Q9H4Z2 1342 aaPredicted RBP13.18□□□□□ -0.3
CDH13-207ENST00000565636 UBAP1LF5GYI3 381 aa13.18□□□□□ -0.3
CDH13-207ENST00000565636 TK2O00142 265 aa13.18□□□□□ -0.3
CDH13-207ENST00000565636 ADGRD1Q6QNK2 874 aa13.18□□□□□ -0.3
CDH13-207ENST00000565636 EIF2AK4Q9P2K8 1649 aaKnown RBP13.17□□□□□ -0.3
CDH13-207ENST00000565636 CAMSAP2Q08AD1 1489 aa13.17□□□□□ -0.3
CDH13-207ENST00000565636 STAC3Q96MF2 364 aa13.17□□□□□ -0.3
CDH13-207ENST00000565636 ILDR2Q71H61 639 aa13.16□□□□□ -0.3
CDH13-207ENST00000565636 RNF17Q9BXT8 1623 aaKnown RBP13.16□□□□□ -0.3
CDH13-207ENST00000565636 SHANK2Q9UPX8 1470 aa13.16□□□□□ -0.3
CDH13-207ENST00000565636 ZNF454Q8N9F8 522 aa13.14□□□□□ -0.31
CDH13-207ENST00000565636 UGGT1Q9NYU2 1555 aa13.14□□□□□ -0.31
CDH13-207ENST00000565636 NEURL4Q96JN8 1562 aa13.13□□□□□ -0.31
CDH13-207ENST00000565636 LRRC9Q6ZRR7 1453 aa13.13□□□□□ -0.31
CDH13-207ENST00000565636 FBXO31Q5XUX0 539 aaPredicted RBP13.13□□□□□ -0.31
CDH13-207ENST00000565636 PSEN2P49810 448 aa13.12□□□□□ -0.31
CDH13-207ENST00000565636 MAP3K9P80192 1104 aa13.12□□□□□ -0.31
CDH13-207ENST00000565636 KCNK17Q96T54 332 aa13.12□□□□□ -0.31
CDH13-207ENST00000565636 MFSD10Q14728 455 aa13.11□□□□□ -0.31
CDH13-207ENST00000565636 MYOM3Q5VTT5 1437 aa13.11□□□□□ -0.31
CDH13-207ENST00000565636 VPS8Q8N3P4 1428 aa13.11□□□□□ -0.31
CDH13-207ENST00000565636 CFAP65Q6ZU64 1925 aaKnown RBP13.11□□□□□ -0.31
CDH13-207ENST00000565636 BBXQ8WY36 941 aaPredicted RBP13.1□□□□□ -0.31
CDH13-207ENST00000565636 ARHGAP31Q2M1Z3 1444 aa13.1□□□□□ -0.31
CDH13-207ENST00000565636 DUOX2Q9NRD8 1548 aa13.09□□□□□ -0.31
CDH13-207ENST00000565636 KDM5AP29375 1690 aaKnown RBP13.09□□□□□ -0.31
CDH13-207ENST00000565636 IQGAP1P46940 1657 aa13.09□□□□□ -0.31
CDH13-207ENST00000565636 EVI5O60447 810 aa13.09□□□□□ -0.31
CDH13-207ENST00000565636 NPHP4O75161 1426 aaPredicted RBP13.09□□□□□ -0.31
CDH13-207ENST00000565636 AMER1Q5JTC6 1135 aaPredicted RBP13.09□□□□□ -0.31
CDH13-207ENST00000565636 VWDEQ8N2E2 1590 aa13.09□□□□□ -0.31
CDH13-207ENST00000565636 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.08□□□□□ -0.31
CDH13-207ENST00000565636 HCSTQ9UBK5 93 aa13.08□□□□□ -0.32
CDH13-207ENST00000565636 ABCC3O15438 1527 aa13.08□□□□□ -0.32
CDH13-207ENST00000565636 DMRTA1Q5VZB9 504 aa13.07□□□□□ -0.32
CDH13-207ENST00000565636 BCL2L12Q9HB09 334 aa13.07□□□□□ -0.32
CDH13-207ENST00000565636 ANO8Q9HCE9 1232 aaPredicted RBP13.07□□□□□ -0.32
CDH13-207ENST00000565636 UBR1Q8IWV7 1749 aa13.06□□□□□ -0.32
CDH13-207ENST00000565636 PTPREP23469 700 aa13.06□□□□□ -0.32
CDH13-207ENST00000565636 FOSBP53539 338 aa13.06□□□□□ -0.32
CDH13-207ENST00000565636 SYNMO15061 1565 aa13.06□□□□□ -0.32
CDH13-207ENST00000565636 ERBINQ96RT1 1412 aa13.05□□□□□ -0.32
CDH13-207ENST00000565636 ERVK-7P63135 1459 aa13.04□□□□□ -0.32
CDH13-207ENST00000565636 SLIT1O75093 1534 aa13.04□□□□□ -0.32
CDH13-207ENST00000565636 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
CDH13-207ENST00000565636 MROH1Q8NDA8 1641 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms