RNA–Protein interactions for RNA: ENST00000565210.5

CDH11-211, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-211ENST00000565210 PRAM1Q96QH2 718 aa32.41■■■□□ 2.78
CDH11-211ENST00000565210 PLEKHH1Q9ULM0 1364 aa32.4■■■□□ 2.78
CDH11-211ENST00000565210 TRAK1Q9UPV9 953 aa32.39■■■□□ 2.78
CDH11-211ENST00000565210 CDC42BPGQ6DT37 1551 aa32.38■■■□□ 2.77
CDH11-211ENST00000565210 SPATA31A6Q5VVP1 1343 aa32.38■■■□□ 2.77
CDH11-211ENST00000565210 ESCO1Q5FWF5 840 aa32.38■■■□□ 2.77
CDH11-211ENST00000565210 ORAI2Q96SN7 254 aa32.37■■■□□ 2.77
CDH11-211ENST00000565210 COL16A1Q07092 1604 aaPredicted RBP32.37■■■□□ 2.77
CDH11-211ENST00000565210 DLC1Q96QB1 1528 aa32.36■■■□□ 2.77
CDH11-211ENST00000565210 NEUROD1Q13562 356 aa32.35■■■□□ 2.77
CDH11-211ENST00000565210 ADGRB1O14514 1584 aa32.34■■■□□ 2.77
CDH11-211ENST00000565210 SAFB2Q14151 953 aaKnown RBP eCLIP32.34■■■□□ 2.77
CDH11-211ENST00000565210 SIN3AQ96ST3 1273 aa32.34■■■□□ 2.77
CDH11-211ENST00000565210 ILDR2Q71H61 639 aa32.31■■■□□ 2.76
CDH11-211ENST00000565210 NUTM2FA1L443 756 aa32.3■■■□□ 2.76
CDH11-211ENST00000565210 L3MBTL2Q969R5 705 aa32.3■■■□□ 2.76
CDH11-211ENST00000565210 NPHP3Q7Z494 1330 aa32.29■■■□□ 2.76
CDH11-211ENST00000565210 DDX17Q92841 729 aaKnown RBP32.29■■■□□ 2.76
CDH11-211ENST00000565210 NHSL1Q5SYE7 1610 aa32.28■■■□□ 2.76
CDH11-211ENST00000565210 MEX3CQ5U5Q3 659 aaKnown RBP32.27■■■□□ 2.76
CDH11-211ENST00000565210 SOS2Q07890 1332 aaPredicted RBP32.26■■■□□ 2.75
CDH11-211ENST00000565210 EIF3AQ14152 1382 aaKnown RBP32.22■■■□□ 2.75
CDH11-211ENST00000565210 FOXO3O43524 673 aa32.22■■■□□ 2.75
CDH11-211ENST00000565210 SHPRHQ149N8 1683 aa32.21■■■□□ 2.75
CDH11-211ENST00000565210 KIAA1210Q9ULL0 1709 aa32.2■■■□□ 2.75
CDH11-211ENST00000565210 NUTM2BA6NNL0 878 aaPredicted RBP32.2■■■□□ 2.75
CDH11-211ENST00000565210 NUTM2EB1AL46 878 aaPredicted RBP32.2■■■□□ 2.75
CDH11-211ENST00000565210 NUTM2AQ8IVF1 878 aaPredicted RBP32.2■■■□□ 2.75
CDH11-211ENST00000565210 MINK1Q8N4C8 1332 aaPredicted RBP32.2■■■□□ 2.74
CDH11-211ENST00000565210 NBPF1Q3BBV0 1214 aa32.18■■■□□ 2.74
CDH11-211ENST00000565210 HIRIP3Q9BW71 556 aaPredicted RBP32.18■■■□□ 2.74
CDH11-211ENST00000565210 PHF8Q9UPP1 1060 aa32.18■■■□□ 2.74
CDH11-211ENST00000565210 FMN2Q9NZ56 1722 aa32.17■■■□□ 2.74
CDH11-211ENST00000565210 WASLO00401 505 aaPredicted RBP32.16■■■□□ 2.74
CDH11-211ENST00000565210 PNPLA6Q8IY17 1366 aa32.16■■■□□ 2.74
CDH11-211ENST00000565210 ANKARQ7Z5J8 1434 aa32.15■■■□□ 2.74
CDH11-211ENST00000565210 PSME1Q06323 249 aa32.14■■■□□ 2.74
CDH11-211ENST00000565210 RGS17Q9UGC6 210 aaPredicted RBP32.14■■■□□ 2.74
CDH11-211ENST00000565210 ADGRB2O60241 1585 aa32.12■■■□□ 2.73
CDH11-211ENST00000565210 TONSLQ96HA7 1378 aa32.12■■■□□ 2.73
CDH11-211ENST00000565210 SOCS7O14512 581 aa32.12■■■□□ 2.73
CDH11-211ENST00000565210 ZNF772Q68DY9 489 aaPredicted RBP32.11■■■□□ 2.73
CDH11-211ENST00000565210 KRT28Q7Z3Y7 464 aa32.1■■■□□ 2.73
CDH11-211ENST00000565210 KIF1AQ12756 1690 aa32.09■■■□□ 2.73
CDH11-211ENST00000565210 XPCQ01831 940 aaPredicted RBP32.09■■■□□ 2.73
CDH11-211ENST00000565210 LRP6O75581 1613 aa32.08■■■□□ 2.73
CDH11-211ENST00000565210 CENPJQ9HC77 1338 aaPredicted RBP32.05■■■□□ 2.72
CDH11-211ENST00000565210 PXDNQ92626 1479 aa32.05■■■□□ 2.72
CDH11-211ENST00000565210 ARHGEF28Q8N1W1 1705 aaKnown RBP32.05■■■□□ 2.72
CDH11-211ENST00000565210 ROCK2O75116 1388 aaKnown RBP32.05■■■□□ 2.72
CDH11-211ENST00000565210 PMFBP1Q8TBY8 1022 aa32.04■■■□□ 2.72
CDH11-211ENST00000565210 CDK19Q9BWU1 502 aa32.03■■■□□ 2.72
CDH11-211ENST00000565210 TULP4Q9NRJ4 1543 aa32.02■■■□□ 2.72
CDH11-211ENST00000565210 POTEAQ6S8J7 498 aa32.02■■■□□ 2.72
CDH11-211ENST00000565210 SPATA31A3Q5VYP0 1347 aa32.01■■■□□ 2.72
CDH11-211ENST00000565210 C8orf37Q96NL8 207 aa32.01■■■□□ 2.71
CDH11-211ENST00000565210 GPRASP1Q5JY77 1395 aa32■■■□□ 2.71
CDH11-211ENST00000565210 ADAMTS2O95450 1211 aa32■■■□□ 2.71
CDH11-211ENST00000565210 NUDT16Q96DE0 195 aaKnown RBP32■■■□□ 2.71
CDH11-211ENST00000565210 PCGF6Q9BYE7 350 aa32■■■□□ 2.71
CDH11-211ENST00000565210 NGDNQ8NEJ9 315 aaKnown RBP31.99■■■□□ 2.71
CDH11-211ENST00000565210 NGLY1Q96IV0 654 aa31.98■■■□□ 2.71
CDH11-211ENST00000565210 PRR36Q9H6K5 1346 aa31.98■■■□□ 2.71
CDH11-211ENST00000565210 SBNO1A3KN83 1393 aa31.97■■■□□ 2.71
CDH11-211ENST00000565210 CCDC61Q9Y6R9 512 aa31.96■■■□□ 2.71
CDH11-211ENST00000565210 RGPD8O14715 1765 aaPredicted RBP31.96■■■□□ 2.71
CDH11-211ENST00000565210 AFF2P51816 1311 aa31.96■■■□□ 2.71
CDH11-211ENST00000565210 NBPF8Q3BBV2 869 aa31.95■■■□□ 2.71
CDH11-211ENST00000565210 LMOD2Q6P5Q4 547 aa31.95■■■□□ 2.71
CDH11-211ENST00000565210 SRPK2P78362 688 aaKnown RBP31.94■■■□□ 2.7
CDH11-211ENST00000565210 TRPM1Q7Z4N2 1603 aa31.93■■■□□ 2.7
CDH11-211ENST00000565210 HAP1P54257 671 aaPredicted RBP31.93■■■□□ 2.7
CDH11-211ENST00000565210 ARHGEF10O15013 1369 aa31.93■■■□□ 2.7
CDH11-211ENST00000565210 USP32Q8NFA0 1604 aa31.93■■■□□ 2.7
CDH11-211ENST00000565210 TNS3Q68CZ2 1445 aa31.92■■■□□ 2.7
CDH11-211ENST00000565210 COL22A1Q8NFW1 1626 aaPredicted RBP31.92■■■□□ 2.7
CDH11-211ENST00000565210 CARD11Q9BXL7 1154 aa31.91■■■□□ 2.7
CDH11-211ENST00000565210 CLSPNQ9HAW4 1339 aa31.9■■■□□ 2.7
CDH11-211ENST00000565210 RXRBP28702 533 aa31.88■■■□□ 2.69
CDH11-211ENST00000565210 EVC2Q86UK5 1308 aa31.88■■■□□ 2.69
CDH11-211ENST00000565210 ATP7BP35670 1465 aa31.87■■■□□ 2.69
CDH11-211ENST00000565210 PLEKHG3A1L390 1219 aa31.85■■■□□ 2.69
CDH11-211ENST00000565210 PAK3O75914 559 aaPredicted RBP31.85■■■□□ 2.69
CDH11-211ENST00000565210 QTRT2Q9H974 415 aaKnown RBP31.85■■■□□ 2.69
CDH11-211ENST00000565210 FNBP4Q8N3X1 1017 aaPredicted RBP31.84■■■□□ 2.69
CDH11-211ENST00000565210 CABP2Q9NPB3 220 aa31.84■■■□□ 2.69
CDH11-211ENST00000565210 USP21Q9UK80 565 aa31.84■■■□□ 2.69
CDH11-211ENST00000565210 TIMELESSQ9UNS1 1208 aa31.84■■■□□ 2.69
CDH11-211ENST00000565210 ITSN1Q15811 1721 aa31.83■■■□□ 2.69
CDH11-211ENST00000565210 ACEP12821 1306 aa31.8■■■□□ 2.68
CDH11-211ENST00000565210 TRPC5Q9UL62 973 aaPredicted RBP31.8■■■□□ 2.68
CDH11-211ENST00000565210 RALGAPBQ86X10 1494 aa31.79■■■□□ 2.68
CDH11-211ENST00000565210 QRICH2Q9H0J4 1663 aa31.79■■■□□ 2.68
CDH11-211ENST00000565210 RBM6P78332 1123 aaKnown RBP31.78■■■□□ 2.68
CDH11-211ENST00000565210 POLR3AO14802 1390 aaPredicted RBP31.78■■■□□ 2.68
CDH11-211ENST00000565210 PLEKHG5O94827 1062 aa31.77■■■□□ 2.68
CDH11-211ENST00000565210 CABLES1Q8TDN4 633 aa31.76■■■□□ 2.67
CDH11-211ENST00000565210 PPIP5K1Q6PFW1 1433 aa31.75■■■□□ 2.67
CDH11-211ENST00000565210 SLC24A1O60721 1099 aa31.75■■■□□ 2.67
CDH11-211ENST00000565210 CABP1Q9NZU7 370 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms