RNA–Protein interactions for RNA: ENST00000564910.5

RAB11A-203, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB11A, Length 978 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-203ENST00000564910 USP21Q9UK80 565 aa16.9■□□□□ 0.3
RAB11A-203ENST00000564910 PPLO60437 1756 aa16.89■□□□□ 0.3
RAB11A-203ENST00000564910 HFM1A2PYH4 1435 aa16.89■□□□□ 0.29
RAB11A-203ENST00000564910 FNBP4Q8N3X1 1017 aaPredicted RBP16.89■□□□□ 0.29
RAB11A-203ENST00000564910 TRPC5Q9UL62 973 aaPredicted RBP16.89■□□□□ 0.29
RAB11A-203ENST00000564910 ATAD2Q6PL18 1390 aa16.89■□□□□ 0.29
RAB11A-203ENST00000564910 RRBP1Q9P2E9 1410 aaKnown RBP16.88■□□□□ 0.29
RAB11A-203ENST00000564910 ATRNO75882 1429 aa16.87■□□□□ 0.29
RAB11A-203ENST00000564910 RPGRIP1LQ68CZ1 1315 aa16.87■□□□□ 0.29
RAB11A-203ENST00000564910 MYOM2P54296 1465 aa16.86■□□□□ 0.29
RAB11A-203ENST00000564910 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
RAB11A-203ENST00000564910 CDC42BPGQ6DT37 1551 aa16.85■□□□□ 0.29
RAB11A-203ENST00000564910 PXDNQ92626 1479 aa16.85■□□□□ 0.29
RAB11A-203ENST00000564910 MARF1Q9Y4F3 1742 aaKnown RBP16.84■□□□□ 0.29
RAB11A-203ENST00000564910 EP400Q96L91 3159 aa16.84■□□□□ 0.29
RAB11A-203ENST00000564910 ESCO1Q5FWF5 840 aa16.83■□□□□ 0.28
RAB11A-203ENST00000564910 NPHP3Q7Z494 1330 aa16.83■□□□□ 0.28
RAB11A-203ENST00000564910 BCL9LQ86UU0 1499 aa16.83■□□□□ 0.28
RAB11A-203ENST00000564910 SLC4A1APQ9BWU0 796 aaKnown RBP16.82■□□□□ 0.28
RAB11A-203ENST00000564910 XPCQ01831 940 aaPredicted RBP16.81■□□□□ 0.28
RAB11A-203ENST00000564910 FOXO3O43524 673 aa16.8■□□□□ 0.28
RAB11A-203ENST00000564910 ADGRF5Q8IZF2 1346 aa16.79■□□□□ 0.28
RAB11A-203ENST00000564910 TECPR2O15040 1411 aa16.79■□□□□ 0.28
RAB11A-203ENST00000564910 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.77■□□□□ 0.28
RAB11A-203ENST00000564910 HOXD11P31277 338 aaPredicted RBP16.77■□□□□ 0.28
RAB11A-203ENST00000564910 WAPLQ7Z5K2 1190 aa16.77■□□□□ 0.28
RAB11A-203ENST00000564910 GJD4Q96KN9 370 aaPredicted RBP16.77■□□□□ 0.28
RAB11A-203ENST00000564910 LRPPRCP42704 1394 aaKnown RBP16.77■□□□□ 0.27
RAB11A-203ENST00000564910 NUTM2FA1L443 756 aa16.76■□□□□ 0.27
RAB11A-203ENST00000564910 STK26Q9P289 416 aa16.76■□□□□ 0.27
RAB11A-203ENST00000564910 ZRANB1Q9UGI0 708 aa16.76■□□□□ 0.27
RAB11A-203ENST00000564910 KNDC1Q76NI1 1749 aa16.76■□□□□ 0.27
RAB11A-203ENST00000564910 IFT172Q9UG01 1749 aa16.76■□□□□ 0.27
RAB11A-203ENST00000564910 PLEKHH1Q9ULM0 1364 aa16.76■□□□□ 0.27
RAB11A-203ENST00000564910 CCDC125Q86Z20 511 aa16.75■□□□□ 0.27
RAB11A-203ENST00000564910 FMN2Q9NZ56 1722 aa16.74■□□□□ 0.27
RAB11A-203ENST00000564910 GLI3P10071 1580 aa16.74■□□□□ 0.27
RAB11A-203ENST00000564910 SPATA31E1Q6ZUB1 1445 aa16.74■□□□□ 0.27
RAB11A-203ENST00000564910 CACNB1Q02641 598 aaPredicted RBP16.74■□□□□ 0.27
RAB11A-203ENST00000564910 SLIT2O94813 1529 aa16.74■□□□□ 0.27
RAB11A-203ENST00000564910 ABCC11Q96J66 1382 aa16.74■□□□□ 0.27
RAB11A-203ENST00000564910 CCDC144AA2RUR9 1427 aa16.73■□□□□ 0.27
RAB11A-203ENST00000564910 RGL3Q3MIN7 710 aa16.73■□□□□ 0.27
RAB11A-203ENST00000564910 RALGAPBQ86X10 1494 aa16.73■□□□□ 0.27
RAB11A-203ENST00000564910 SPATA31A3Q5VYP0 1347 aa16.72■□□□□ 0.27
RAB11A-203ENST00000564910 KIF1AQ12756 1690 aa16.72■□□□□ 0.27
RAB11A-203ENST00000564910 TMEM132EQ6IEE7 984 aa16.72■□□□□ 0.27
RAB11A-203ENST00000564910 UNC5CLQ8IV45 518 aa16.72■□□□□ 0.27
RAB11A-203ENST00000564910 ANKRD30BQ9BXX2 1392 aa16.72■□□□□ 0.27
RAB11A-203ENST00000564910 PIK3C2GO75747 1445 aa16.71■□□□□ 0.27
RAB11A-203ENST00000564910 USP32Q8NFA0 1604 aa16.71■□□□□ 0.27
RAB11A-203ENST00000564910 BRWD3Q6RI45 1802 aa16.7■□□□□ 0.26
RAB11A-203ENST00000564910 YTHDC2Q9H6S0 1430 aaKnown RBP16.7■□□□□ 0.26
RAB11A-203ENST00000564910 RGPD8O14715 1765 aaPredicted RBP16.69■□□□□ 0.26
RAB11A-203ENST00000564910 BLMP54132 1417 aaPredicted RBP16.69■□□□□ 0.26
RAB11A-203ENST00000564910 KRT28Q7Z3Y7 464 aa16.68■□□□□ 0.26
RAB11A-203ENST00000564910 TNS3Q68CZ2 1445 aa16.66■□□□□ 0.26
RAB11A-203ENST00000564910 CNKSR2Q8WXI2 1034 aa16.66■□□□□ 0.26
RAB11A-203ENST00000564910 SIRT1Q96EB6 747 aa16.66■□□□□ 0.26
RAB11A-203ENST00000564910 MPHOSPH9Q99550 1183 aa16.66■□□□□ 0.26
RAB11A-203ENST00000564910 DCAF8L1A6NGE4 600 aa16.65■□□□□ 0.26
RAB11A-203ENST00000564910 PLCH1Q4KWH8 1693 aa16.65■□□□□ 0.26
RAB11A-203ENST00000564910 ABCA3Q99758 1704 aa16.65■□□□□ 0.26
RAB11A-203ENST00000564910 DEFB132Q7Z7B7 95 aa16.64■□□□□ 0.25
RAB11A-203ENST00000564910 SEPT12Q8IYM1 358 aa16.64■□□□□ 0.25
RAB11A-203ENST00000564910 CABLES1Q8TDN4 633 aa16.64■□□□□ 0.25
RAB11A-203ENST00000564910 PHF8Q9UPP1 1060 aa16.64■□□□□ 0.25
RAB11A-203ENST00000564910 NWD2Q9ULI1 1742 aa16.64■□□□□ 0.25
RAB11A-203ENST00000564910 NRXN1Q9ULB1 1477 aa16.63■□□□□ 0.25
RAB11A-203ENST00000564910 VPS72Q15906 364 aa16.63■□□□□ 0.25
RAB11A-203ENST00000564910 C14orf93Q9H972 538 aaKnown RBP16.63■□□□□ 0.25
RAB11A-203ENST00000564910 HAP1P54257 671 aaPredicted RBP16.62■□□□□ 0.25
RAB11A-203ENST00000564910 PSME1Q06323 249 aa16.62■□□□□ 0.25
RAB11A-203ENST00000564910 SBNO1A3KN83 1393 aa16.62■□□□□ 0.25
RAB11A-203ENST00000564910 ONECUT3O60422 494 aaPredicted RBP16.61■□□□□ 0.25
RAB11A-203ENST00000564910 PLEKHG5O94827 1062 aa16.6■□□□□ 0.25
RAB11A-203ENST00000564910 CFAP70Q5T0N1 1121 aa16.6■□□□□ 0.25
RAB11A-203ENST00000564910 ARHGEF10O15013 1369 aa16.59■□□□□ 0.25
RAB11A-203ENST00000564910 DHX57Q6P158 1386 aaKnown RBP16.59■□□□□ 0.25
RAB11A-203ENST00000564910 FAM83GA6ND36 823 aa16.58■□□□□ 0.24
RAB11A-203ENST00000564910 SF3B2Q13435 895 aaKnown RBP16.58■□□□□ 0.24
RAB11A-203ENST00000564910 SAFB2Q14151 953 aaKnown RBP eCLIP16.58■□□□□ 0.24
RAB11A-203ENST00000564910 LMOD2Q6P5Q4 547 aa16.58■□□□□ 0.24
RAB11A-203ENST00000564910 KRT27Q7Z3Y8 459 aa16.58■□□□□ 0.24
RAB11A-203ENST00000564910 PRAM1Q96QH2 718 aa16.58■□□□□ 0.24
RAB11A-203ENST00000564910 RNF216Q9NWF9 866 aaPredicted RBP16.58■□□□□ 0.24
RAB11A-203ENST00000564910 CCDC9Q9Y3X0 531 aaKnown RBP16.58■□□□□ 0.24
RAB11A-203ENST00000564910 NRAPQ86VF7 1730 aa16.58■□□□□ 0.24
RAB11A-203ENST00000564910 LRP5O75197 1615 aa16.56■□□□□ 0.24
RAB11A-203ENST00000564910 DLC1Q96QB1 1528 aa16.56■□□□□ 0.24
RAB11A-203ENST00000564910 ANKARQ7Z5J8 1434 aa16.56■□□□□ 0.24
RAB11A-203ENST00000564910 PMFBP1Q8TBY8 1022 aa16.56■□□□□ 0.24
RAB11A-203ENST00000564910 TRPM3Q9HCF6 1732 aaPredicted RBP16.56■□□□□ 0.24
RAB11A-203ENST00000564910 ADGRB2O60241 1585 aa16.55■□□□□ 0.24
RAB11A-203ENST00000564910 ALS2Q96Q42 1657 aa16.53■□□□□ 0.24
RAB11A-203ENST00000564910 POGKQ9P215 609 aa16.53■□□□□ 0.24
RAB11A-203ENST00000564910 ADGRB1O14514 1584 aa16.52■□□□□ 0.24
RAB11A-203ENST00000564910 FAM98CQ17RN3 349 aaKnown RBP16.52■□□□□ 0.24
RAB11A-203ENST00000564910 RNF39Q9H2S5 420 aa16.52■□□□□ 0.24
RAB11A-203ENST00000564910 COL14A1Q05707 1796 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms