RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 POGKQ9P215 609 aa19.73■□□□□ 0.75
CNOT1-206ENST00000564557 TECPR2O15040 1411 aa19.72■□□□□ 0.75
CNOT1-206ENST00000564557 BRINP3Q76B58 766 aa19.72■□□□□ 0.75
CNOT1-206ENST00000564557 NALCNQ8IZF0 1738 aa19.72■□□□□ 0.75
CNOT1-206ENST00000564557 SIRT1Q96EB6 747 aa19.72■□□□□ 0.75
CNOT1-206ENST00000564557 MST1RQ04912 1400 aa19.71■□□□□ 0.75
CNOT1-206ENST00000564557 SIN3AQ96ST3 1273 aa19.71■□□□□ 0.75
CNOT1-206ENST00000564557 ASXL1Q8IXJ9 1541 aa19.71■□□□□ 0.75
CNOT1-206ENST00000564557 PHLPP1O60346 1717 aa19.7■□□□□ 0.74
CNOT1-206ENST00000564557 TRAK1Q9UPV9 953 aa19.69■□□□□ 0.74
CNOT1-206ENST00000564557 KNDC1Q76NI1 1749 aa19.68■□□□□ 0.74
CNOT1-206ENST00000564557 SAFB2Q14151 953 aaKnown RBP eCLIP19.68■□□□□ 0.74
CNOT1-206ENST00000564557 PRAM1Q96QH2 718 aa19.68■□□□□ 0.74
CNOT1-206ENST00000564557 PLEKHH1Q9ULM0 1364 aa19.67■□□□□ 0.74
CNOT1-206ENST00000564557 JCADQ9P266 1359 aa19.66■□□□□ 0.74
CNOT1-206ENST00000564557 C1orf167Q5SNV9 1468 aa19.66■□□□□ 0.74
CNOT1-206ENST00000564557 NUTM2FA1L443 756 aa19.65■□□□□ 0.74
CNOT1-206ENST00000564557 ESCO1Q5FWF5 840 aa19.65■□□□□ 0.74
CNOT1-206ENST00000564557 L3MBTL2Q969R5 705 aa19.65■□□□□ 0.74
CNOT1-206ENST00000564557 ORAI2Q96SN7 254 aa19.64■□□□□ 0.73
CNOT1-206ENST00000564557 MED1Q15648 1581 aaPredicted RBP19.63■□□□□ 0.73
CNOT1-206ENST00000564557 AHDC1Q5TGY3 1603 aaPredicted RBP19.62■□□□□ 0.73
CNOT1-206ENST00000564557 CDC42BPGQ6DT37 1551 aa19.62■□□□□ 0.73
CNOT1-206ENST00000564557 LRRC59Q96AG4 307 aaKnown RBP19.62■□□□□ 0.73
CNOT1-206ENST00000564557 DLC1Q96QB1 1528 aa19.61■□□□□ 0.73
CNOT1-206ENST00000564557 ADGRB1O14514 1584 aa19.61■□□□□ 0.73
CNOT1-206ENST00000564557 DDX17Q92841 729 aaKnown RBP19.6■□□□□ 0.73
CNOT1-206ENST00000564557 COL16A1Q07092 1604 aaPredicted RBP19.59■□□□□ 0.73
CNOT1-206ENST00000564557 PCGF6Q9BYE7 350 aa19.59■□□□□ 0.73
CNOT1-206ENST00000564557 MINK1Q8N4C8 1332 aaPredicted RBP19.58■□□□□ 0.73
CNOT1-206ENST00000564557 MEX3CQ5U5Q3 659 aaKnown RBP19.58■□□□□ 0.72
CNOT1-206ENST00000564557 TONSLQ96HA7 1378 aa19.57■□□□□ 0.72
CNOT1-206ENST00000564557 SPATA31A6Q5VVP1 1343 aa19.57■□□□□ 0.72
CNOT1-206ENST00000564557 NPHP3Q7Z494 1330 aa19.57■□□□□ 0.72
CNOT1-206ENST00000564557 HIRIP3Q9BW71 556 aaPredicted RBP19.57■□□□□ 0.72
CNOT1-206ENST00000564557 NBPF1Q3BBV0 1214 aa19.56■□□□□ 0.72
CNOT1-206ENST00000564557 KIAA1210Q9ULL0 1709 aa19.56■□□□□ 0.72
CNOT1-206ENST00000564557 NHSL1Q5SYE7 1610 aa19.55■□□□□ 0.72
CNOT1-206ENST00000564557 FOXO3O43524 673 aa19.55■□□□□ 0.72
CNOT1-206ENST00000564557 NUTM2BA6NNL0 878 aaPredicted RBP19.54■□□□□ 0.72
CNOT1-206ENST00000564557 NUTM2EB1AL46 878 aaPredicted RBP19.54■□□□□ 0.72
CNOT1-206ENST00000564557 NUTM2AQ8IVF1 878 aaPredicted RBP19.54■□□□□ 0.72
CNOT1-206ENST00000564557 EIF3AQ14152 1382 aaKnown RBP19.54■□□□□ 0.72
CNOT1-206ENST00000564557 FMN2Q9NZ56 1722 aa19.53■□□□□ 0.72
CNOT1-206ENST00000564557 PHF8Q9UPP1 1060 aa19.52■□□□□ 0.72
CNOT1-206ENST00000564557 SOS2Q07890 1332 aaPredicted RBP19.51■□□□□ 0.71
CNOT1-206ENST00000564557 WASLO00401 505 aaPredicted RBP19.51■□□□□ 0.71
CNOT1-206ENST00000564557 SHPRHQ149N8 1683 aa19.5■□□□□ 0.71
CNOT1-206ENST00000564557 XPCQ01831 940 aaPredicted RBP19.5■□□□□ 0.71
CNOT1-206ENST00000564557 ILDR2Q71H61 639 aa19.5■□□□□ 0.71
CNOT1-206ENST00000564557 ROCK2O75116 1388 aaKnown RBP19.49■□□□□ 0.71
CNOT1-206ENST00000564557 PSME1Q06323 249 aa19.49■□□□□ 0.71
CNOT1-206ENST00000564557 ARHGEF28Q8N1W1 1705 aaKnown RBP19.48■□□□□ 0.71
CNOT1-206ENST00000564557 ANKARQ7Z5J8 1434 aa19.48■□□□□ 0.71
CNOT1-206ENST00000564557 CENPJQ9HC77 1338 aaPredicted RBP19.48■□□□□ 0.71
CNOT1-206ENST00000564557 KRT28Q7Z3Y7 464 aa19.47■□□□□ 0.71
CNOT1-206ENST00000564557 PMFBP1Q8TBY8 1022 aa19.47■□□□□ 0.71
CNOT1-206ENST00000564557 ADGRB2O60241 1585 aa19.47■□□□□ 0.71
CNOT1-206ENST00000564557 KIF1AQ12756 1690 aa19.46■□□□□ 0.71
CNOT1-206ENST00000564557 PNPLA6Q8IY17 1366 aa19.46■□□□□ 0.71
CNOT1-206ENST00000564557 CDK19Q9BWU1 502 aa19.45■□□□□ 0.7
CNOT1-206ENST00000564557 RGPD8O14715 1765 aaPredicted RBP19.44■□□□□ 0.7
CNOT1-206ENST00000564557 NGDNQ8NEJ9 315 aaKnown RBP19.44■□□□□ 0.7
CNOT1-206ENST00000564557 SRPK2P78362 688 aaKnown RBP19.43■□□□□ 0.7
CNOT1-206ENST00000564557 NBPF8Q3BBV2 869 aa19.43■□□□□ 0.7
CNOT1-206ENST00000564557 LMOD2Q6P5Q4 547 aa19.43■□□□□ 0.7
CNOT1-206ENST00000564557 NUDT16Q96DE0 195 aaKnown RBP19.43■□□□□ 0.7
CNOT1-206ENST00000564557 TRPM1Q7Z4N2 1603 aa19.43■□□□□ 0.7
CNOT1-206ENST00000564557 TULP4Q9NRJ4 1543 aa19.42■□□□□ 0.7
CNOT1-206ENST00000564557 ADAMTS2O95450 1211 aa19.42■□□□□ 0.7
CNOT1-206ENST00000564557 ZNF772Q68DY9 489 aaPredicted RBP19.42■□□□□ 0.7
CNOT1-206ENST00000564557 CARD11Q9BXL7 1154 aa19.42■□□□□ 0.7
CNOT1-206ENST00000564557 GPRASP1Q5JY77 1395 aa19.42■□□□□ 0.7
CNOT1-206ENST00000564557 PXDNQ92626 1479 aa19.41■□□□□ 0.7
CNOT1-206ENST00000564557 LRP6O75581 1613 aa19.41■□□□□ 0.7
CNOT1-206ENST00000564557 C8orf37Q96NL8 207 aa19.41■□□□□ 0.7
CNOT1-206ENST00000564557 RGS17Q9UGC6 210 aaPredicted RBP19.41■□□□□ 0.7
CNOT1-206ENST00000564557 HAP1P54257 671 aaPredicted RBP19.4■□□□□ 0.7
CNOT1-206ENST00000564557 PRR36Q9H6K5 1346 aa19.4■□□□□ 0.7
CNOT1-206ENST00000564557 CCER1Q8TC90 406 aaPredicted RBP19.39■□□□□ 0.69
CNOT1-206ENST00000564557 NGLY1Q96IV0 654 aa19.39■□□□□ 0.69
CNOT1-206ENST00000564557 SPATA31A3Q5VYP0 1347 aa19.39■□□□□ 0.69
CNOT1-206ENST00000564557 CLSPNQ9HAW4 1339 aa19.39■□□□□ 0.69
CNOT1-206ENST00000564557 CCDC61Q9Y6R9 512 aa19.38■□□□□ 0.69
CNOT1-206ENST00000564557 USP32Q8NFA0 1604 aa19.37■□□□□ 0.69
CNOT1-206ENST00000564557 EVC2Q86UK5 1308 aa19.37■□□□□ 0.69
CNOT1-206ENST00000564557 SOCS7O14512 581 aa19.36■□□□□ 0.69
CNOT1-206ENST00000564557 PAK3O75914 559 aaPredicted RBP19.36■□□□□ 0.69
CNOT1-206ENST00000564557 PLEKHG5O94827 1062 aa19.36■□□□□ 0.69
CNOT1-206ENST00000564557 POTEAQ6S8J7 498 aa19.36■□□□□ 0.69
CNOT1-206ENST00000564557 SBNO1A3KN83 1393 aa19.35■□□□□ 0.69
CNOT1-206ENST00000564557 AFF2P51816 1311 aa19.35■□□□□ 0.69
CNOT1-206ENST00000564557 ITSN1Q15811 1721 aa19.35■□□□□ 0.69
CNOT1-206ENST00000564557 CABP2Q9NPB3 220 aa19.35■□□□□ 0.69
CNOT1-206ENST00000564557 TNS3Q68CZ2 1445 aa19.34■□□□□ 0.69
CNOT1-206ENST00000564557 ARHGEF10O15013 1369 aa19.34■□□□□ 0.69
CNOT1-206ENST00000564557 QRICH2Q9H0J4 1663 aa19.34■□□□□ 0.69
CNOT1-206ENST00000564557 TIMELESSQ9UNS1 1208 aa19.34■□□□□ 0.69
CNOT1-206ENST00000564557 ATP7BP35670 1465 aa19.34■□□□□ 0.69
CNOT1-206ENST00000564557 RALGAPBQ86X10 1494 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms