RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	ZKSCAN2	Q63HK3	967 aa		5.12	□□□□□ -1.59
MACF1-231	ENST00000564288	SRRT	Q9BXP5	876 aa	Known RBP	5.12	□□□□□ -1.59
MACF1-231	ENST00000564288	POGK	Q9P215	609 aa		5.12	□□□□□ -1.59
MACF1-231	ENST00000564288	NUP160	Q12769	1436 aa		5.12	□□□□□ -1.59
MACF1-231	ENST00000564288	HMMR	O75330	724 aa		5.12	□□□□□ -1.59
MACF1-231	ENST00000564288	MYBBP1A	Q9BQG0	1328 aa	Known RBP	5.12	□□□□□ -1.59
MACF1-231	ENST00000564288	KLHL40	Q2TBA0	621 aa		5.12	□□□□□ -1.59
MACF1-231	ENST00000564288	SMG6	Q86US8	1419 aa	Known RBP	5.12	□□□□□ -1.59
MACF1-231	ENST00000564288	PLIN1	O60240	522 aa		5.12	□□□□□ -1.59
MACF1-231	ENST00000564288	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	5.12	□□□□□ -1.59
MACF1-231	ENST00000564288	PLEKHD1	A6NEE1	506 aa		5.12	□□□□□ -1.59
MACF1-231	ENST00000564288	CCDC192	P0DO97	292 aa		5.12	□□□□□ -1.59
MACF1-231	ENST00000564288	TUBB2A	Q13885	445 aa		5.11	□□□□□ -1.59
MACF1-231	ENST00000564288	ZNF592	Q92610	1267 aa		5.11	□□□□□ -1.59
MACF1-231	ENST00000564288	TUBB2B	Q9BVA1	445 aa		5.11	□□□□□ -1.59
MACF1-231	ENST00000564288	RNF123	Q5XPI4	1314 aa		5.11	□□□□□ -1.59
MACF1-231	ENST00000564288	LRRC9	Q6ZRR7	1453 aa		5.11	□□□□□ -1.59
MACF1-231	ENST00000564288	ATP8B1	O43520	1251 aa		5.11	□□□□□ -1.59
MACF1-231	ENST00000564288	WDR63	Q8IWG1	891 aa		5.11	□□□□□ -1.59
MACF1-231	ENST00000564288	STK11IP	Q8N1F8	1099 aa		5.11	□□□□□ -1.59
MACF1-231	ENST00000564288	ZKSCAN5	Q9Y2L8	839 aa		5.11	□□□□□ -1.59
MACF1-231	ENST00000564288	EIF3J	O75822	258 aa	Known RBP	5.11	□□□□□ -1.59
MACF1-231	ENST00000564288	PDC	P20941	246 aa		5.11	□□□□□ -1.59
MACF1-231	ENST00000564288	GBP3	Q9H0R5	595 aa		5.11	□□□□□ -1.59
MACF1-231	ENST00000564288	MCM3	P25205	808 aa		5.11	□□□□□ -1.59
MACF1-231	ENST00000564288	MYRIP	Q8NFW9	859 aa		5.11	□□□□□ -1.59
MACF1-231	ENST00000564288		A0A1B0GUL7	405 aa		5.11	□□□□□ -1.59
MACF1-231	ENST00000564288	MKRN1	Q9UHC7	482 aa	Known RBP	5.11	□□□□□ -1.59
MACF1-231	ENST00000564288	TMCO3	Q6UWJ1	677 aa		5.11	□□□□□ -1.59
MACF1-231	ENST00000564288	PLEKHH1	Q9ULM0	1364 aa		5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	RRP7BP	Q9NSQ0	103 aa		5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	ERLIN1	O75477	346 aa		5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	SETSIP	P0DME0	302 aa		5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	ZHX1	Q9UKY1	873 aa	Predicted RBP	5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	HOOK1	Q9UJC3	728 aa	Known RBP	5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	KANK4	Q5T7N3	995 aa	Predicted RBP	5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	P3H3	Q8IVL6	736 aa		5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	TBC1D2	Q9BYX2	928 aa		5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	DCAF11	Q8TEB1	546 aa		5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	KIF7	Q2M1P5	1343 aa		5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	CCDC196	A0A1B0GTZ2	297 aa		5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	TMX4	Q9H1E5	349 aa	Predicted RBP	5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	MICALCL	Q6ZW33	695 aa		5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	CLUAP1	Q96AJ1	413 aa		5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	POTEB2	H3BUK9	544 aa		5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	RASSF4	Q9H2L5	321 aa		5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	SMC5	Q8IY18	1101 aa		5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	MYCBP	Q99417	103 aa	Predicted RBP	5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	DDX19B	Q9UMR2	479 aa		5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	HMGB2	P26583	209 aa	Known RBP	5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	GIMAP7	Q8NHV1	300 aa		5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	CHIC2	Q9UKJ5	165 aa		5.1	□□□□□ -1.59
MACF1-231	ENST00000564288	RRP12	Q5JTH9	1297 aa	Known RBP	5.09	□□□□□ -1.59
MACF1-231	ENST00000564288	ZNF445	P59923	1031 aa		5.09	□□□□□ -1.59
MACF1-231	ENST00000564288	KIAA1328	Q86T90	577 aa		5.09	□□□□□ -1.59
MACF1-231	ENST00000564288	BANK1	Q8NDB2	785 aa		5.09	□□□□□ -1.59
MACF1-231	ENST00000564288	PTPN14	Q15678	1187 aa		5.09	□□□□□ -1.59
MACF1-231	ENST00000564288	INTS3	Q68E01	1043 aa	Known RBP	5.09	□□□□□ -1.59
MACF1-231	ENST00000564288	CCDC50	Q8IVM0	306 aa		5.09	□□□□□ -1.59
MACF1-231	ENST00000564288	HOXA7	P31268	230 aa	Predicted RBP	5.09	□□□□□ -1.59
MACF1-231	ENST00000564288	DZIP1L	Q8IYY4	767 aa	Known RBP	5.09	□□□□□ -1.59
MACF1-231	ENST00000564288	PANK3	Q9H999	370 aa		5.09	□□□□□ -1.59
MACF1-231	ENST00000564288	DCTN1	Q14203	1278 aa		5.09	□□□□□ -1.59
MACF1-231	ENST00000564288	TRIM5	Q9C035	493 aa		5.09	□□□□□ -1.59
MACF1-231	ENST00000564288	MORC1	Q86VD1	984 aa		5.09	□□□□□ -1.59
MACF1-231	ENST00000564288	CEP120	Q8N960	986 aa		5.09	□□□□□ -1.59
MACF1-231	ENST00000564288	B4GALNT4	Q76KP1	1039 aa		5.09	□□□□□ -1.6
MACF1-231	ENST00000564288	WDR33	Q9C0J8	1336 aa	Known RBP	5.09	□□□□□ -1.6
MACF1-231	ENST00000564288	TBC1D32	Q96NH3	1257 aa		5.09	□□□□□ -1.6
MACF1-231	ENST00000564288	GCC1	Q96CN9	775 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	CCDC83	Q8IWF9	413 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	TIAM1	Q13009	1591 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	UHRF1BP1	Q6BDS2	1440 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	NPC1L1	Q9UHC9	1359 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	KIAA0754	O94854	1291 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	CTAGE5	O15320	804 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	USP25	Q9UHP3	1055 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	NSD2	O96028	1365 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	STK31	Q9BXU1	1019 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	SMC4	Q9NTJ3	1288 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	SHANK2	Q9UPX8	1470 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	SMTNL1	A8MU46	457 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	DNAAF4	Q8WXU2	420 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	PPM1E	Q8WY54	764 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	SOGA1	O94964	1423 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	SUPT6H	Q7KZ85	1726 aa	Known RBP	5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	TEX2	Q8IWB9	1127 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	PUS7	Q96PZ0	661 aa	Known RBP	5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	CFDP1	Q9UEE9	299 aa	Predicted RBP	5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	KDM4A	O75164	1064 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288		H0YHG0	523 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	TNNT1	P13805	278 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	ABCC11	Q96J66	1382 aa		5.08	□□□□□ -1.6
MACF1-231	ENST00000564288	HECW1	Q76N89	1606 aa		5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	BRMS1	Q9HCU9	246 aa		5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	TULP1	O00294	542 aa	Predicted RBP	5.07	□□□□□ -1.6
MACF1-231	ENST00000564288		K7ELQ4	463 aa	Predicted RBP	5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	U2SURP	O15042	1029 aa	Known RBP	5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	RUFY2	Q8WXA3	655 aa		5.07	□□□□□ -1.6
MACF1-231	ENST00000564288	SNAPC4	Q5SXM2	1469 aa		5.07	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms