RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 METRNQ9UJH8 293 aa11.82□□□□□ -0.52
TCF4-221ENST00000563888 SPATA31A6Q5VVP1 1343 aa11.82□□□□□ -0.52
TCF4-221ENST00000563888 PLEKHH2Q8IVE3 1493 aa11.82□□□□□ -0.52
TCF4-221ENST00000563888 LRP6O75581 1613 aa11.82□□□□□ -0.52
TCF4-221ENST00000563888 KDM5DQ9BY66 1539 aa11.81□□□□□ -0.52
TCF4-221ENST00000563888 CCNB3Q8WWL7 1395 aa11.81□□□□□ -0.52
TCF4-221ENST00000563888 CDC42BPAQ5VT25 1732 aa11.81□□□□□ -0.52
TCF4-221ENST00000563888 KCNA6P17658 529 aa11.81□□□□□ -0.52
TCF4-221ENST00000563888 SLC26A8Q96RN1 970 aa11.81□□□□□ -0.52
TCF4-221ENST00000563888 SCAF11Q99590 1463 aaKnown RBP11.81□□□□□ -0.52
TCF4-221ENST00000563888 EEA1Q15075 1411 aa11.8□□□□□ -0.52
TCF4-221ENST00000563888 TTLL13PA6NNM8 815 aa11.79□□□□□ -0.52
TCF4-221ENST00000563888 QTRT2Q9H974 415 aaKnown RBP11.78□□□□□ -0.52
TCF4-221ENST00000563888 AFF2P51816 1311 aa11.78□□□□□ -0.52
TCF4-221ENST00000563888 MSH6P52701 1360 aa11.78□□□□□ -0.52
TCF4-221ENST00000563888 LRRIQ1Q96JM4 1722 aa11.77□□□□□ -0.52
TCF4-221ENST00000563888 CCDC18Q5T9S5 1454 aa11.77□□□□□ -0.52
TCF4-221ENST00000563888 XIRP1Q702N8 1843 aaKnown RBP11.77□□□□□ -0.52
TCF4-221ENST00000563888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.53
TCF4-221ENST00000563888 ADGBQ8N7X0 1667 aa11.77□□□□□ -0.53
TCF4-221ENST00000563888 LRRC9Q6ZRR7 1453 aa11.76□□□□□ -0.53
TCF4-221ENST00000563888 ZC3H13Q5T200 1668 aaKnown RBP11.76□□□□□ -0.53
TCF4-221ENST00000563888 PDE4AP27815 886 aa11.76□□□□□ -0.53
TCF4-221ENST00000563888 MS4A4AQ96JQ5 239 aa11.76□□□□□ -0.53
TCF4-221ENST00000563888 PHLPP1O60346 1717 aa11.76□□□□□ -0.53
TCF4-221ENST00000563888 CASKIN1Q8WXD9 1431 aa11.76□□□□□ -0.53
TCF4-221ENST00000563888 RBM6P78332 1123 aaKnown RBP11.75□□□□□ -0.53
TCF4-221ENST00000563888 RTEL1-TNFRSF6BF6WH68 1400 aa11.75□□□□□ -0.53
TCF4-221ENST00000563888 CDK12Q9NYV4 1490 aaPredicted RBP11.75□□□□□ -0.53
TCF4-221ENST00000563888 C14orf37Q86TY3 774 aa11.74□□□□□ -0.53
TCF4-221ENST00000563888 C8orf37Q96NL8 207 aa11.74□□□□□ -0.53
TCF4-221ENST00000563888 TRIM35Q9UPQ4 493 aa11.74□□□□□ -0.53
TCF4-221ENST00000563888 SETBP1Q9Y6X0 1596 aa11.74□□□□□ -0.53
TCF4-221ENST00000563888 RGS12O14924 1447 aa11.73□□□□□ -0.53
TCF4-221ENST00000563888 NCOA2Q15596 1464 aa11.73□□□□□ -0.53
TCF4-221ENST00000563888 KCNV2Q8TDN2 545 aa11.73□□□□□ -0.53
TCF4-221ENST00000563888 MBD5Q9P267 1494 aa11.73□□□□□ -0.53
TCF4-221ENST00000563888 MAP3K1Q13233 1512 aa11.72□□□□□ -0.53
TCF4-221ENST00000563888 ERVK-7P63135 1459 aa11.72□□□□□ -0.53
TCF4-221ENST00000563888 E2F4Q16254 413 aa11.72□□□□□ -0.53
TCF4-221ENST00000563888 LARP6Q9BRS8 491 aaKnown RBP11.72□□□□□ -0.53
TCF4-221ENST00000563888 FGD6Q6ZV73 1430 aa11.71□□□□□ -0.53
TCF4-221ENST00000563888 ATAD2Q6PL18 1390 aa11.71□□□□□ -0.53
TCF4-221ENST00000563888 POTEB2H3BUK9 544 aa11.71□□□□□ -0.53
TCF4-221ENST00000563888 IER5LQ5T953 404 aa11.71□□□□□ -0.53
TCF4-221ENST00000563888 ARHGAP23Q9P227 1491 aa11.7□□□□□ -0.54
TCF4-221ENST00000563888 TMEM2Q9UHN6 1383 aa11.7□□□□□ -0.54
TCF4-221ENST00000563888 PRDM15P57071 1507 aaPredicted RBP11.7□□□□□ -0.54
TCF4-221ENST00000563888 EP400Q96L91 3159 aa11.69□□□□□ -0.54
TCF4-221ENST00000563888 COL16A1Q07092 1604 aaPredicted RBP11.69□□□□□ -0.54
TCF4-221ENST00000563888 SEC24BO95487 1268 aa11.69□□□□□ -0.54
TCF4-221ENST00000563888 TSPY4P0CV99 314 aa11.69□□□□□ -0.54
TCF4-221ENST00000563888 TSPY10P0CW01 314 aa11.69□□□□□ -0.54
TCF4-221ENST00000563888 NGLY1Q96IV0 654 aa11.69□□□□□ -0.54
TCF4-221ENST00000563888 SLIT1O75093 1534 aa11.69□□□□□ -0.54
TCF4-221ENST00000563888 MTUS2Q5JR59 1369 aa11.68□□□□□ -0.54
TCF4-221ENST00000563888 TULP1O00294 542 aaPredicted RBP11.68□□□□□ -0.54
TCF4-221ENST00000563888 ATF3P18847 181 aa11.68□□□□□ -0.54
TCF4-221ENST00000563888 ABCC3O15438 1527 aa11.67□□□□□ -0.54
TCF4-221ENST00000563888 UBR1Q8IWV7 1749 aa11.67□□□□□ -0.54
TCF4-221ENST00000563888 MAMSTRQ6ZN01 415 aa11.67□□□□□ -0.54
TCF4-221ENST00000563888 ARHGEF1Q92888 912 aaKnown RBP11.67□□□□□ -0.54
TCF4-221ENST00000563888 ADAMTS2O95450 1211 aa11.66□□□□□ -0.54
TCF4-221ENST00000563888 RSPH4AQ5TD94 716 aa11.65□□□□□ -0.54
TCF4-221ENST00000563888 OTUD5Q96G74 571 aa11.65□□□□□ -0.54
TCF4-221ENST00000563888 DDX27Q96GQ7 796 aaKnown RBP11.65□□□□□ -0.54
TCF4-221ENST00000563888 CCDC141Q6ZP82 1450 aa11.64□□□□□ -0.55
TCF4-221ENST00000563888 IDI1Q13907 227 aa11.64□□□□□ -0.55
TCF4-221ENST00000563888 TIAM1Q13009 1591 aa11.63□□□□□ -0.55
TCF4-221ENST00000563888 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
TCF4-221ENST00000563888 G3V3G9 751 aa11.63□□□□□ -0.55
TCF4-221ENST00000563888 BRINP3Q76B58 766 aa11.63□□□□□ -0.55
TCF4-221ENST00000563888 NKTRP30414 1462 aaKnown RBP11.63□□□□□ -0.55
TCF4-221ENST00000563888 FYCO1Q9BQS8 1478 aa11.63□□□□□ -0.55
TCF4-221ENST00000563888 CCDC125Q86Z20 511 aa11.62□□□□□ -0.55
TCF4-221ENST00000563888 CRISPLD2Q9H0B8 497 aa11.62□□□□□ -0.55
TCF4-221ENST00000563888 C19orf44Q9H6X5 657 aa11.62□□□□□ -0.55
TCF4-221ENST00000563888 LRRC59Q96AG4 307 aaKnown RBP11.61□□□□□ -0.55
TCF4-221ENST00000563888 SCUBE2Q9NQ36 999 aa11.61□□□□□ -0.55
TCF4-221ENST00000563888 USP21Q9UK80 565 aa11.61□□□□□ -0.55
TCF4-221ENST00000563888 CFAP65Q6ZU64 1925 aaKnown RBP11.6□□□□□ -0.55
TCF4-221ENST00000563888 TET3O43151 1660 aa11.6□□□□□ -0.55
TCF4-221ENST00000563888 PPP1R15AO75807 674 aaPredicted RBP11.6□□□□□ -0.55
TCF4-221ENST00000563888 DPY19L2Q6NUT2 758 aa11.6□□□□□ -0.55
TCF4-221ENST00000563888 DDX17Q92841 729 aaKnown RBP11.6□□□□□ -0.55
TCF4-221ENST00000563888 COLQQ9Y215 455 aaPredicted RBP11.6□□□□□ -0.55
TCF4-221ENST00000563888 SHPRHQ149N8 1683 aa11.59□□□□□ -0.55
TCF4-221ENST00000563888 MFSD10Q14728 455 aa11.59□□□□□ -0.55
TCF4-221ENST00000563888 DEFB132Q7Z7B7 95 aa11.59□□□□□ -0.55
TCF4-221ENST00000563888 OCEL1Q9H607 264 aa11.59□□□□□ -0.55
TCF4-221ENST00000563888 TRPC5Q9UL62 973 aaPredicted RBP11.59□□□□□ -0.55
TCF4-221ENST00000563888 AHDC1Q5TGY3 1603 aaPredicted RBP11.58□□□□□ -0.56
TCF4-221ENST00000563888 PSDA5PKW4 1024 aaPredicted RBP11.58□□□□□ -0.56
TCF4-221ENST00000563888 PLCG2P16885 1265 aa11.58□□□□□ -0.56
TCF4-221ENST00000563888 EFCAB6Q5THR3 1501 aa11.57□□□□□ -0.56
TCF4-221ENST00000563888 POTEJP0CG39 1038 aa11.57□□□□□ -0.56
TCF4-221ENST00000563888 CAMSAP2Q08AD1 1489 aa11.57□□□□□ -0.56
TCF4-221ENST00000563888 PIK3C2BO00750 1634 aa11.57□□□□□ -0.56
TCF4-221ENST00000563888 YY1P25490 414 aa11.56□□□□□ -0.56
TCF4-221ENST00000563888 TMC2Q8TDI7 906 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms