RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 WAPLQ7Z5K2 1190 aa17.84■□□□□ 0.45
NSMCE1-204ENST00000563273 DCAF11Q8TEB1 546 aa17.84■□□□□ 0.45
NSMCE1-204ENST00000563273 LRRC59Q96AG4 307 aaKnown RBP17.84■□□□□ 0.45
NSMCE1-204ENST00000563273 RGS17Q9UGC6 210 aaPredicted RBP17.83■□□□□ 0.44
NSMCE1-204ENST00000563273 ADGRB1O14514 1584 aa17.83■□□□□ 0.44
NSMCE1-204ENST00000563273 DLC1Q96QB1 1528 aa17.82■□□□□ 0.44
NSMCE1-204ENST00000563273 PLEKHH1Q9ULM0 1364 aa17.82■□□□□ 0.44
NSMCE1-204ENST00000563273 SHPRHQ149N8 1683 aa17.82■□□□□ 0.44
NSMCE1-204ENST00000563273 SOS2Q07890 1332 aaPredicted RBP17.81■□□□□ 0.44
NSMCE1-204ENST00000563273 ORAI2Q96SN7 254 aa17.8■□□□□ 0.44
NSMCE1-204ENST00000563273 KDM2AQ9Y2K7 1162 aa17.79■□□□□ 0.44
NSMCE1-204ENST00000563273 NPHP3Q7Z494 1330 aa17.78■□□□□ 0.44
NSMCE1-204ENST00000563273 LRP6O75581 1613 aa17.78■□□□□ 0.44
NSMCE1-204ENST00000563273 PRAM1Q96QH2 718 aa17.77■□□□□ 0.44
NSMCE1-204ENST00000563273 PNPLA6Q8IY17 1366 aa17.77■□□□□ 0.43
NSMCE1-204ENST00000563273 ESCO1Q5FWF5 840 aa17.76■□□□□ 0.43
NSMCE1-204ENST00000563273 DDX17Q92841 729 aaKnown RBP17.76■□□□□ 0.43
NSMCE1-204ENST00000563273 POGKQ9P215 609 aa17.74■□□□□ 0.43
NSMCE1-204ENST00000563273 POTEAQ6S8J7 498 aa17.73■□□□□ 0.43
NSMCE1-204ENST00000563273 ADGRB2O60241 1585 aa17.73■□□□□ 0.43
NSMCE1-204ENST00000563273 ANKARQ7Z5J8 1434 aa17.72■□□□□ 0.43
NSMCE1-204ENST00000563273 PXDNQ92626 1479 aa17.72■□□□□ 0.43
NSMCE1-204ENST00000563273 MEX3CQ5U5Q3 659 aaKnown RBP17.72■□□□□ 0.43
NSMCE1-204ENST00000563273 ZNF772Q68DY9 489 aaPredicted RBP17.72■□□□□ 0.43
NSMCE1-204ENST00000563273 FMN2Q9NZ56 1722 aa17.72■□□□□ 0.43
NSMCE1-204ENST00000563273 EIF3AQ14152 1382 aaKnown RBP17.71■□□□□ 0.43
NSMCE1-204ENST00000563273 TRAK1Q9UPV9 953 aa17.71■□□□□ 0.43
NSMCE1-204ENST00000563273 FOXO3O43524 673 aa17.7■□□□□ 0.42
NSMCE1-204ENST00000563273 KIF1AQ12756 1690 aa17.68■□□□□ 0.42
NSMCE1-204ENST00000563273 NUTM2FA1L443 756 aa17.68■□□□□ 0.42
NSMCE1-204ENST00000563273 NUTM2BA6NNL0 878 aaPredicted RBP17.68■□□□□ 0.42
NSMCE1-204ENST00000563273 NUTM2EB1AL46 878 aaPredicted RBP17.68■□□□□ 0.42
NSMCE1-204ENST00000563273 SAFB2Q14151 953 aaKnown RBP eCLIP17.68■□□□□ 0.42
NSMCE1-204ENST00000563273 NUTM2AQ8IVF1 878 aaPredicted RBP17.68■□□□□ 0.42
NSMCE1-204ENST00000563273 KIAA1210Q9ULL0 1709 aa17.67■□□□□ 0.42
NSMCE1-204ENST00000563273 TRIM26Q12899 539 aaPredicted RBP17.67■□□□□ 0.42
NSMCE1-204ENST00000563273 PHF8Q9UPP1 1060 aa17.67■□□□□ 0.42
NSMCE1-204ENST00000563273 COL22A1Q8NFW1 1626 aaPredicted RBP17.66■□□□□ 0.42
NSMCE1-204ENST00000563273 WASLO00401 505 aaPredicted RBP17.65■□□□□ 0.42
NSMCE1-204ENST00000563273 L3MBTL2Q969R5 705 aa17.65■□□□□ 0.42
NSMCE1-204ENST00000563273 SPATA31A3Q5VYP0 1347 aa17.64■□□□□ 0.41
NSMCE1-204ENST00000563273 TULP4Q9NRJ4 1543 aa17.63■□□□□ 0.41
NSMCE1-204ENST00000563273 PSME1Q06323 249 aa17.63■□□□□ 0.41
NSMCE1-204ENST00000563273 KRT28Q7Z3Y7 464 aa17.63■□□□□ 0.41
NSMCE1-204ENST00000563273 AFF2P51816 1311 aa17.63■□□□□ 0.41
NSMCE1-204ENST00000563273 MINK1Q8N4C8 1332 aaPredicted RBP17.63■□□□□ 0.41
NSMCE1-204ENST00000563273 SBNO1A3KN83 1393 aa17.63■□□□□ 0.41
NSMCE1-204ENST00000563273 SIN3AQ96ST3 1273 aa17.62■□□□□ 0.41
NSMCE1-204ENST00000563273 XPCQ01831 940 aaPredicted RBP17.61■□□□□ 0.41
NSMCE1-204ENST00000563273 NBPF1Q3BBV0 1214 aa17.61■□□□□ 0.41
NSMCE1-204ENST00000563273 HIRIP3Q9BW71 556 aaPredicted RBP17.61■□□□□ 0.41
NSMCE1-204ENST00000563273 ARHGEF28Q8N1W1 1705 aaKnown RBP17.61■□□□□ 0.41
NSMCE1-204ENST00000563273 FNBP4Q8N3X1 1017 aaPredicted RBP17.6■□□□□ 0.41
NSMCE1-204ENST00000563273 C8orf37Q96NL8 207 aa17.6■□□□□ 0.41
NSMCE1-204ENST00000563273 PRR36Q9H6K5 1346 aa17.6■□□□□ 0.41
NSMCE1-204ENST00000563273 TNS3Q68CZ2 1445 aa17.6■□□□□ 0.41
NSMCE1-204ENST00000563273 CDK12Q9NYV4 1490 aaPredicted RBP17.6■□□□□ 0.41
NSMCE1-204ENST00000563273 USP32Q8NFA0 1604 aa17.6■□□□□ 0.41
NSMCE1-204ENST00000563273 ADAMTS2O95450 1211 aa17.59■□□□□ 0.41
NSMCE1-204ENST00000563273 ARHGEF10O15013 1369 aa17.58■□□□□ 0.4
NSMCE1-204ENST00000563273 RXRBP28702 533 aa17.58■□□□□ 0.4
NSMCE1-204ENST00000563273 NGLY1Q96IV0 654 aa17.58■□□□□ 0.4
NSMCE1-204ENST00000563273 ATP7BP35670 1465 aa17.56■□□□□ 0.4
NSMCE1-204ENST00000563273 NEUROD1Q13562 356 aa17.56■□□□□ 0.4
NSMCE1-204ENST00000563273 GPRASP1Q5JY77 1395 aa17.55■□□□□ 0.4
NSMCE1-204ENST00000563273 CENPJQ9HC77 1338 aaPredicted RBP17.55■□□□□ 0.4
NSMCE1-204ENST00000563273 PMFBP1Q8TBY8 1022 aa17.55■□□□□ 0.4
NSMCE1-204ENST00000563273 NUDT16Q96DE0 195 aaKnown RBP17.55■□□□□ 0.4
NSMCE1-204ENST00000563273 QTRT2Q9H974 415 aaKnown RBP17.55■□□□□ 0.4
NSMCE1-204ENST00000563273 RBM6P78332 1123 aaKnown RBP17.54■□□□□ 0.4
NSMCE1-204ENST00000563273 CDK19Q9BWU1 502 aa17.54■□□□□ 0.4
NSMCE1-204ENST00000563273 USP21Q9UK80 565 aa17.53■□□□□ 0.4
NSMCE1-204ENST00000563273 CCDC61Q9Y6R9 512 aa17.53■□□□□ 0.4
NSMCE1-204ENST00000563273 TRPC5Q9UL62 973 aaPredicted RBP17.52■□□□□ 0.4
NSMCE1-204ENST00000563273 POLR3AO14802 1390 aaPredicted RBP17.52■□□□□ 0.39
NSMCE1-204ENST00000563273 ROCK2O75116 1388 aaKnown RBP17.52■□□□□ 0.39
NSMCE1-204ENST00000563273 RGPD8O14715 1765 aaPredicted RBP17.51■□□□□ 0.39
NSMCE1-204ENST00000563273 PLEKHG3A1L390 1219 aa17.51■□□□□ 0.39
NSMCE1-204ENST00000563273 ATRNO75882 1429 aa17.51■□□□□ 0.39
NSMCE1-204ENST00000563273 NGDNQ8NEJ9 315 aaKnown RBP17.51■□□□□ 0.39
NSMCE1-204ENST00000563273 TRPM1Q7Z4N2 1603 aa17.5■□□□□ 0.39
NSMCE1-204ENST00000563273 BCL9LQ86UU0 1499 aa17.5■□□□□ 0.39
NSMCE1-204ENST00000563273 SLIT2O94813 1529 aa17.49■□□□□ 0.39
NSMCE1-204ENST00000563273 TRPM3Q9HCF6 1732 aaPredicted RBP17.48■□□□□ 0.39
NSMCE1-204ENST00000563273 TONSLQ96HA7 1378 aa17.48■□□□□ 0.39
NSMCE1-204ENST00000563273 ITSN1Q15811 1721 aa17.47■□□□□ 0.39
NSMCE1-204ENST00000563273 NBPF8Q3BBV2 869 aa17.47■□□□□ 0.39
NSMCE1-204ENST00000563273 BRD4O60885 1362 aaPredicted RBP17.46■□□□□ 0.39
NSMCE1-204ENST00000563273 HAP1P54257 671 aaPredicted RBP17.46■□□□□ 0.39
NSMCE1-204ENST00000563273 LMOD2Q6P5Q4 547 aa17.46■□□□□ 0.39
NSMCE1-204ENST00000563273 UNC5CLQ8IV45 518 aa17.46■□□□□ 0.39
NSMCE1-204ENST00000563273 RGS12O14924 1447 aa17.46■□□□□ 0.39
NSMCE1-204ENST00000563273 ACEP12821 1306 aa17.46■□□□□ 0.38
NSMCE1-204ENST00000563273 TOPAZ1Q8N9V7 1692 aa17.45■□□□□ 0.38
NSMCE1-204ENST00000563273 ALS2Q96Q42 1657 aa17.45■□□□□ 0.38
NSMCE1-204ENST00000563273 SBNO2Q9Y2G9 1366 aa17.45■□□□□ 0.38
NSMCE1-204ENST00000563273 MARF1Q9Y4F3 1742 aaKnown RBP17.45■□□□□ 0.38
NSMCE1-204ENST00000563273 SRPK2P78362 688 aaKnown RBP17.45■□□□□ 0.38
NSMCE1-204ENST00000563273 EVC2Q86UK5 1308 aa17.45■□□□□ 0.38
NSMCE1-204ENST00000563273 CABLES1Q8TDN4 633 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 196.5 ms