RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 WAPLQ7Z5K2 1190 aa23.37■■□□□ 1.33
COMMD4-206ENST00000562610 DISP3Q9P2K9 1392 aa23.37■■□□□ 1.33
COMMD4-206ENST00000562610 SIN3AQ96ST3 1273 aa23.36■■□□□ 1.33
COMMD4-206ENST00000562610 NEUROD1Q13562 356 aa23.34■■□□□ 1.33
COMMD4-206ENST00000562610 BRINP3Q76B58 766 aa23.34■■□□□ 1.33
COMMD4-206ENST00000562610 C1orf167Q5SNV9 1468 aa23.34■■□□□ 1.33
COMMD4-206ENST00000562610 RGPD8O14715 1765 aaPredicted RBP23.34■■□□□ 1.33
COMMD4-206ENST00000562610 SHPRHQ149N8 1683 aa23.32■■□□□ 1.32
COMMD4-206ENST00000562610 TRPM1Q7Z4N2 1603 aa23.3■■□□□ 1.32
COMMD4-206ENST00000562610 ADGRB2O60241 1585 aa23.3■■□□□ 1.32
COMMD4-206ENST00000562610 SAFB2Q14151 953 aaKnown RBP eCLIP23.29■■□□□ 1.32
COMMD4-206ENST00000562610 PRAM1Q96QH2 718 aa23.29■■□□□ 1.32
COMMD4-206ENST00000562610 TRAK1Q9UPV9 953 aa23.29■■□□□ 1.32
COMMD4-206ENST00000562610 L3MBTL2Q969R5 705 aa23.28■■□□□ 1.32
COMMD4-206ENST00000562610 POGKQ9P215 609 aa23.28■■□□□ 1.32
COMMD4-206ENST00000562610 SIRT1Q96EB6 747 aa23.27■■□□□ 1.32
COMMD4-206ENST00000562610 KIF1AQ12756 1690 aa23.27■■□□□ 1.32
COMMD4-206ENST00000562610 JCADQ9P266 1359 aa23.26■■□□□ 1.31
COMMD4-206ENST00000562610 NUTM2FA1L443 756 aa23.24■■□□□ 1.31
COMMD4-206ENST00000562610 ORAI2Q96SN7 254 aa23.23■■□□□ 1.31
COMMD4-206ENST00000562610 PCGF6Q9BYE7 350 aa23.23■■□□□ 1.31
COMMD4-206ENST00000562610 USP32Q8NFA0 1604 aa23.22■■□□□ 1.31
COMMD4-206ENST00000562610 DDX17Q92841 729 aaKnown RBP23.22■■□□□ 1.31
COMMD4-206ENST00000562610 QRICH2Q9H0J4 1663 aa23.22■■□□□ 1.31
COMMD4-206ENST00000562610 TONSLQ96HA7 1378 aa23.21■■□□□ 1.31
COMMD4-206ENST00000562610 ITSN1Q15811 1721 aa23.2■■□□□ 1.3
COMMD4-206ENST00000562610 ESCO1Q5FWF5 840 aa23.2■■□□□ 1.3
COMMD4-206ENST00000562610 MINK1Q8N4C8 1332 aaPredicted RBP23.19■■□□□ 1.3
COMMD4-206ENST00000562610 PHF23Q9BUL5 403 aaPredicted RBP23.19■■□□□ 1.3
COMMD4-206ENST00000562610 NBPF1Q3BBV0 1214 aa23.18■■□□□ 1.3
COMMD4-206ENST00000562610 HIRIP3Q9BW71 556 aaPredicted RBP23.17■■□□□ 1.3
COMMD4-206ENST00000562610 TULP4Q9NRJ4 1543 aa23.16■■□□□ 1.3
COMMD4-206ENST00000562610 LRP6O75581 1613 aa23.14■■□□□ 1.29
COMMD4-206ENST00000562610 ANKARQ7Z5J8 1434 aa23.14■■□□□ 1.29
COMMD4-206ENST00000562610 EIF3AQ14152 1382 aaKnown RBP23.14■■□□□ 1.29
COMMD4-206ENST00000562610 PXDNQ92626 1479 aa23.13■■□□□ 1.29
COMMD4-206ENST00000562610 LRRC59Q96AG4 307 aaKnown RBP23.13■■□□□ 1.29
COMMD4-206ENST00000562610 ROCK2O75116 1388 aaKnown RBP23.13■■□□□ 1.29
COMMD4-206ENST00000562610 SPATA31A6Q5VVP1 1343 aa23.12■■□□□ 1.29
COMMD4-206ENST00000562610 NPHP3Q7Z494 1330 aa23.12■■□□□ 1.29
COMMD4-206ENST00000562610 PNPLA6Q8IY17 1366 aa23.11■■□□□ 1.29
COMMD4-206ENST00000562610 COL22A1Q8NFW1 1626 aaPredicted RBP23.11■■□□□ 1.29
COMMD4-206ENST00000562610 SOS2Q07890 1332 aaPredicted RBP23.1■■□□□ 1.29
COMMD4-206ENST00000562610 TOPAZ1Q8N9V7 1692 aa23.1■■□□□ 1.29
COMMD4-206ENST00000562610 FOXO3O43524 673 aa23.09■■□□□ 1.29
COMMD4-206ENST00000562610 XPCQ01831 940 aaPredicted RBP23.09■■□□□ 1.29
COMMD4-206ENST00000562610 WASLO00401 505 aaPredicted RBP23.08■■□□□ 1.29
COMMD4-206ENST00000562610 RALGAPBQ86X10 1494 aa23.07■■□□□ 1.28
COMMD4-206ENST00000562610 NBPF8Q3BBV2 869 aa23.07■■□□□ 1.28
COMMD4-206ENST00000562610 MEX3CQ5U5Q3 659 aaKnown RBP23.07■■□□□ 1.28
COMMD4-206ENST00000562610 PHF8Q9UPP1 1060 aa23.07■■□□□ 1.28
COMMD4-206ENST00000562610 CENPJQ9HC77 1338 aaPredicted RBP23.07■■□□□ 1.28
COMMD4-206ENST00000562610 ATP7BP35670 1465 aa23.06■■□□□ 1.28
COMMD4-206ENST00000562610 MARF1Q9Y4F3 1742 aaKnown RBP23.06■■□□□ 1.28
COMMD4-206ENST00000562610 NUTM2BA6NNL0 878 aaPredicted RBP23.06■■□□□ 1.28
COMMD4-206ENST00000562610 NUTM2EB1AL46 878 aaPredicted RBP23.06■■□□□ 1.28
COMMD4-206ENST00000562610 NUTM2AQ8IVF1 878 aaPredicted RBP23.06■■□□□ 1.28
COMMD4-206ENST00000562610 ILDR2Q71H61 639 aa23.05■■□□□ 1.28
COMMD4-206ENST00000562610 TRPM3Q9HCF6 1732 aaPredicted RBP23.04■■□□□ 1.28
COMMD4-206ENST00000562610 PRR36Q9H6K5 1346 aa23.04■■□□□ 1.28
COMMD4-206ENST00000562610 PMFBP1Q8TBY8 1022 aa23.02■■□□□ 1.28
COMMD4-206ENST00000562610 ABCA3Q99758 1704 aa23.02■■□□□ 1.28
COMMD4-206ENST00000562610 GPRASP1Q5JY77 1395 aa23.01■■□□□ 1.27
COMMD4-206ENST00000562610 KRT28Q7Z3Y7 464 aa22.99■■□□□ 1.27
COMMD4-206ENST00000562610 CDK19Q9BWU1 502 aa22.99■■□□□ 1.27
COMMD4-206ENST00000562610 TNS3Q68CZ2 1445 aa22.99■■□□□ 1.27
COMMD4-206ENST00000562610 ALS2Q96Q42 1657 aa22.98■■□□□ 1.27
COMMD4-206ENST00000562610 CLSPNQ9HAW4 1339 aa22.98■■□□□ 1.27
COMMD4-206ENST00000562610 PSME1Q06323 249 aa22.97■■□□□ 1.27
COMMD4-206ENST00000562610 NUDT16Q96DE0 195 aaKnown RBP22.97■■□□□ 1.27
COMMD4-206ENST00000562610 CARD11Q9BXL7 1154 aa22.97■■□□□ 1.27
COMMD4-206ENST00000562610 RGS17Q9UGC6 210 aaPredicted RBP22.97■■□□□ 1.27
COMMD4-206ENST00000562610 SRPK2P78362 688 aaKnown RBP22.96■■□□□ 1.27
COMMD4-206ENST00000562610 SPATA31A3Q5VYP0 1347 aa22.95■■□□□ 1.26
COMMD4-206ENST00000562610 NGDNQ8NEJ9 315 aaKnown RBP22.94■■□□□ 1.26
COMMD4-206ENST00000562610 CCER1Q8TC90 406 aaPredicted RBP22.94■■□□□ 1.26
COMMD4-206ENST00000562610 SBNO1A3KN83 1393 aa22.93■■□□□ 1.26
COMMD4-206ENST00000562610 ADAMTS2O95450 1211 aa22.93■■□□□ 1.26
COMMD4-206ENST00000562610 C8orf37Q96NL8 207 aa22.92■■□□□ 1.26
COMMD4-206ENST00000562610 PPIP5K1Q6PFW1 1433 aa22.91■■□□□ 1.26
COMMD4-206ENST00000562610 LMOD2Q6P5Q4 547 aa22.91■■□□□ 1.26
COMMD4-206ENST00000562610 CABP2Q9NPB3 220 aa22.91■■□□□ 1.26
COMMD4-206ENST00000562610 CRYBG1Q9Y4K1 1723 aa22.91■■□□□ 1.26
COMMD4-206ENST00000562610 ARHGEF10O15013 1369 aa22.9■■□□□ 1.26
COMMD4-206ENST00000562610 EVC2Q86UK5 1308 aa22.9■■□□□ 1.26
COMMD4-206ENST00000562610 AFF2P51816 1311 aa22.89■■□□□ 1.26
COMMD4-206ENST00000562610 PLEKHG5O94827 1062 aa22.89■■□□□ 1.25
COMMD4-206ENST00000562610 POTEAQ6S8J7 498 aa22.89■■□□□ 1.25
COMMD4-206ENST00000562610 CCDC61Q9Y6R9 512 aa22.89■■□□□ 1.25
COMMD4-206ENST00000562610 ZNF772Q68DY9 489 aaPredicted RBP22.88■■□□□ 1.25
COMMD4-206ENST00000562610 AKAP12Q02952 1782 aa22.88■■□□□ 1.25
COMMD4-206ENST00000562610 PLCH1Q4KWH8 1693 aa22.87■■□□□ 1.25
COMMD4-206ENST00000562610 POLR3AO14802 1390 aaPredicted RBP22.87■■□□□ 1.25
COMMD4-206ENST00000562610 SBNO2Q9Y2G9 1366 aa22.87■■□□□ 1.25
COMMD4-206ENST00000562610 PHRF1Q9P1Y6 1649 aaKnown RBP22.86■■□□□ 1.25
COMMD4-206ENST00000562610 HAP1P54257 671 aaPredicted RBP22.86■■□□□ 1.25
COMMD4-206ENST00000562610 ACEP12821 1306 aa22.85■■□□□ 1.25
COMMD4-206ENST00000562610 PAK3O75914 559 aaPredicted RBP22.85■■□□□ 1.25
COMMD4-206ENST00000562610 NGLY1Q96IV0 654 aa22.85■■□□□ 1.25
COMMD4-206ENST00000562610 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms