RNA–Protein interactions for RNA: ENST00000562047.1

EDC3-203, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-203ENST00000562047 KNDC1Q76NI1 1749 aa16.19■□□□□ 0.18
EDC3-203ENST00000562047 POGKQ9P215 609 aa16.18■□□□□ 0.18
EDC3-203ENST00000562047 COL16A1Q07092 1604 aaPredicted RBP16.18■□□□□ 0.18
EDC3-203ENST00000562047 CDC42BPGQ6DT37 1551 aa16.17■□□□□ 0.18
EDC3-203ENST00000562047 ESCO1Q5FWF5 840 aa16.16■□□□□ 0.18
EDC3-203ENST00000562047 ILDR2Q71H61 639 aa16.16■□□□□ 0.18
EDC3-203ENST00000562047 PRAM1Q96QH2 718 aa16.16■□□□□ 0.18
EDC3-203ENST00000562047 DLC1Q96QB1 1528 aa16.15■□□□□ 0.18
EDC3-203ENST00000562047 ORAI2Q96SN7 254 aa16.15■□□□□ 0.18
EDC3-203ENST00000562047 NPHP3Q7Z494 1330 aa16.15■□□□□ 0.18
EDC3-203ENST00000562047 PLEKHH1Q9ULM0 1364 aa16.14■□□□□ 0.17
EDC3-203ENST00000562047 TRAK1Q9UPV9 953 aa16.14■□□□□ 0.17
EDC3-203ENST00000562047 NHSL1Q5SYE7 1610 aa16.14■□□□□ 0.17
EDC3-203ENST00000562047 ADGRB1O14514 1584 aa16.13■□□□□ 0.17
EDC3-203ENST00000562047 MEX3CQ5U5Q3 659 aaKnown RBP16.12■□□□□ 0.17
EDC3-203ENST00000562047 SOS2Q07890 1332 aaPredicted RBP16.12■□□□□ 0.17
EDC3-203ENST00000562047 SHPRHQ149N8 1683 aa16.11■□□□□ 0.17
EDC3-203ENST00000562047 SAFB2Q14151 953 aaKnown RBP eCLIP16.11■□□□□ 0.17
EDC3-203ENST00000562047 SOCS7O14512 581 aa16.1■□□□□ 0.17
EDC3-203ENST00000562047 DDX17Q92841 729 aaKnown RBP16.1■□□□□ 0.17
EDC3-203ENST00000562047 EIF3AQ14152 1382 aaKnown RBP16.1■□□□□ 0.17
EDC3-203ENST00000562047 NUTM2FA1L443 756 aa16.09■□□□□ 0.17
EDC3-203ENST00000562047 NEUROD1Q13562 356 aa16.09■□□□□ 0.17
EDC3-203ENST00000562047 FOXO3O43524 673 aa16.08■□□□□ 0.16
EDC3-203ENST00000562047 L3MBTL2Q969R5 705 aa16.08■□□□□ 0.16
EDC3-203ENST00000562047 KIAA1210Q9ULL0 1709 aa16.08■□□□□ 0.16
EDC3-203ENST00000562047 SIN3AQ96ST3 1273 aa16.07■□□□□ 0.16
EDC3-203ENST00000562047 FMN2Q9NZ56 1722 aa16.06■□□□□ 0.16
EDC3-203ENST00000562047 PNPLA6Q8IY17 1366 aa16.06■□□□□ 0.16
EDC3-203ENST00000562047 NUTM2BA6NNL0 878 aaPredicted RBP16.06■□□□□ 0.16
EDC3-203ENST00000562047 NUTM2EB1AL46 878 aaPredicted RBP16.06■□□□□ 0.16
EDC3-203ENST00000562047 ZNF772Q68DY9 489 aaPredicted RBP16.06■□□□□ 0.16
EDC3-203ENST00000562047 NUTM2AQ8IVF1 878 aaPredicted RBP16.06■□□□□ 0.16
EDC3-203ENST00000562047 RGS17Q9UGC6 210 aaPredicted RBP16.06■□□□□ 0.16
EDC3-203ENST00000562047 ANKARQ7Z5J8 1434 aa16.05■□□□□ 0.16
EDC3-203ENST00000562047 PSME1Q06323 249 aa16.05■□□□□ 0.16
EDC3-203ENST00000562047 PHF8Q9UPP1 1060 aa16.05■□□□□ 0.16
EDC3-203ENST00000562047 ADGRB2O60241 1585 aa16.04■□□□□ 0.16
EDC3-203ENST00000562047 MINK1Q8N4C8 1332 aaPredicted RBP16.04■□□□□ 0.16
EDC3-203ENST00000562047 WASLO00401 505 aaPredicted RBP16.04■□□□□ 0.16
EDC3-203ENST00000562047 HIRIP3Q9BW71 556 aaPredicted RBP16.04■□□□□ 0.16
EDC3-203ENST00000562047 KIF1AQ12756 1690 aa16.04■□□□□ 0.16
EDC3-203ENST00000562047 LRP6O75581 1613 aa16.02■□□□□ 0.16
EDC3-203ENST00000562047 NBPF1Q3BBV0 1214 aa16.02■□□□□ 0.16
EDC3-203ENST00000562047 KRT28Q7Z3Y7 464 aa16.02■□□□□ 0.16
EDC3-203ENST00000562047 PXDNQ92626 1479 aa16.02■□□□□ 0.15
EDC3-203ENST00000562047 KCNA4P22459 653 aa16■□□□□ 0.15
EDC3-203ENST00000562047 XPCQ01831 940 aaPredicted RBP16■□□□□ 0.15
EDC3-203ENST00000562047 POTEAQ6S8J7 498 aa16■□□□□ 0.15
EDC3-203ENST00000562047 ARHGEF28Q8N1W1 1705 aaKnown RBP15.99■□□□□ 0.15
EDC3-203ENST00000562047 TONSLQ96HA7 1378 aa15.99■□□□□ 0.15
EDC3-203ENST00000562047 TULP4Q9NRJ4 1543 aa15.99■□□□□ 0.15
EDC3-203ENST00000562047 SPATA31A3Q5VYP0 1347 aa15.98■□□□□ 0.15
EDC3-203ENST00000562047 CENPJQ9HC77 1338 aaPredicted RBP15.98■□□□□ 0.15
EDC3-203ENST00000562047 C8orf37Q96NL8 207 aa15.98■□□□□ 0.15
EDC3-203ENST00000562047 GPRASP1Q5JY77 1395 aa15.98■□□□□ 0.15
EDC3-203ENST00000562047 AFF2P51816 1311 aa15.97■□□□□ 0.15
EDC3-203ENST00000562047 ADAMTS2O95450 1211 aa15.97■□□□□ 0.15
EDC3-203ENST00000562047 PMFBP1Q8TBY8 1022 aa15.97■□□□□ 0.15
EDC3-203ENST00000562047 NGLY1Q96IV0 654 aa15.97■□□□□ 0.15
EDC3-203ENST00000562047 SBNO1A3KN83 1393 aa15.97■□□□□ 0.15
EDC3-203ENST00000562047 ROCK2O75116 1388 aaKnown RBP15.97■□□□□ 0.15
EDC3-203ENST00000562047 NGDNQ8NEJ9 315 aaKnown RBP15.96■□□□□ 0.15
EDC3-203ENST00000562047 NUDT16Q96DE0 195 aaKnown RBP15.96■□□□□ 0.15
EDC3-203ENST00000562047 CDK19Q9BWU1 502 aa15.96■□□□□ 0.15
EDC3-203ENST00000562047 COL22A1Q8NFW1 1626 aaPredicted RBP15.96■□□□□ 0.15
EDC3-203ENST00000562047 ARHGEF10O15013 1369 aa15.96■□□□□ 0.15
EDC3-203ENST00000562047 RGPD8O14715 1765 aaPredicted RBP15.95■□□□□ 0.14
EDC3-203ENST00000562047 CCDC61Q9Y6R9 512 aa15.95■□□□□ 0.14
EDC3-203ENST00000562047 TNS3Q68CZ2 1445 aa15.94■□□□□ 0.14
EDC3-203ENST00000562047 RXRBP28702 533 aa15.94■□□□□ 0.14
EDC3-203ENST00000562047 PRR36Q9H6K5 1346 aa15.94■□□□□ 0.14
EDC3-203ENST00000562047 HAP1P54257 671 aaPredicted RBP15.93■□□□□ 0.14
EDC3-203ENST00000562047 LMOD2Q6P5Q4 547 aa15.93■□□□□ 0.14
EDC3-203ENST00000562047 PIAS4Q8N2W9 510 aaPredicted RBP15.93■□□□□ 0.14
EDC3-203ENST00000562047 USP32Q8NFA0 1604 aa15.93■□□□□ 0.14
EDC3-203ENST00000562047 SRPK2P78362 688 aaKnown RBP15.92■□□□□ 0.14
EDC3-203ENST00000562047 FNBP4Q8N3X1 1017 aaPredicted RBP15.92■□□□□ 0.14
EDC3-203ENST00000562047 QTRT2Q9H974 415 aaKnown RBP15.92■□□□□ 0.14
EDC3-203ENST00000562047 TRPM1Q7Z4N2 1603 aa15.92■□□□□ 0.14
EDC3-203ENST00000562047 USP21Q9UK80 565 aa15.91■□□□□ 0.14
EDC3-203ENST00000562047 ITSN1Q15811 1721 aa15.91■□□□□ 0.14
EDC3-203ENST00000562047 ATP7BP35670 1465 aa15.91■□□□□ 0.14
EDC3-203ENST00000562047 EVC2Q86UK5 1308 aa15.9■□□□□ 0.14
EDC3-203ENST00000562047 CLSPNQ9HAW4 1339 aa15.9■□□□□ 0.14
EDC3-203ENST00000562047 PLEKHG3A1L390 1219 aa15.89■□□□□ 0.13
EDC3-203ENST00000562047 RBM6P78332 1123 aaKnown RBP15.89■□□□□ 0.13
EDC3-203ENST00000562047 NBPF8Q3BBV2 869 aa15.89■□□□□ 0.13
EDC3-203ENST00000562047 CARD11Q9BXL7 1154 aa15.89■□□□□ 0.13
EDC3-203ENST00000562047 TRPC5Q9UL62 973 aaPredicted RBP15.89■□□□□ 0.13
EDC3-203ENST00000562047 PAK3O75914 559 aaPredicted RBP15.88■□□□□ 0.13
EDC3-203ENST00000562047 CDK12Q9NYV4 1490 aaPredicted RBP15.87■□□□□ 0.13
EDC3-203ENST00000562047 PCGF6Q9BYE7 350 aa15.87■□□□□ 0.13
EDC3-203ENST00000562047 TIMELESSQ9UNS1 1208 aa15.87■□□□□ 0.13
EDC3-203ENST00000562047 POLR3AO14802 1390 aaPredicted RBP15.87■□□□□ 0.13
EDC3-203ENST00000562047 SLC24A1O60721 1099 aa15.86■□□□□ 0.13
EDC3-203ENST00000562047 CABP2Q9NPB3 220 aa15.86■□□□□ 0.13
EDC3-203ENST00000562047 ACEP12821 1306 aa15.86■□□□□ 0.13
EDC3-203ENST00000562047 QRICH2Q9H0J4 1663 aa15.86■□□□□ 0.13
EDC3-203ENST00000562047 BRD4O60885 1362 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms