RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 LRRC59Q96AG4 307 aaKnown RBP26.98■■□□□ 1.91
PKD1-223ENST00000561668 PRAM1Q96QH2 718 aa26.98■■□□□ 1.91
PKD1-223ENST00000561668 TRAK1Q9UPV9 953 aa26.98■■□□□ 1.91
PKD1-223ENST00000561668 AHDC1Q5TGY3 1603 aaPredicted RBP26.98■■□□□ 1.91
PKD1-223ENST00000561668 PLEKHH1Q9ULM0 1364 aa26.97■■□□□ 1.91
PKD1-223ENST00000561668 NEUROD1Q13562 356 aa26.97■■□□□ 1.91
PKD1-223ENST00000561668 ESCO1Q5FWF5 840 aa26.97■■□□□ 1.91
PKD1-223ENST00000561668 ORAI2Q96SN7 254 aa26.97■■□□□ 1.91
PKD1-223ENST00000561668 SAFB2Q14151 953 aaKnown RBP eCLIP26.96■■□□□ 1.91
PKD1-223ENST00000561668 ILDR2Q71H61 639 aa26.96■■□□□ 1.91
PKD1-223ENST00000561668 COL16A1Q07092 1604 aaPredicted RBP26.94■■□□□ 1.9
PKD1-223ENST00000561668 NUTM2FA1L443 756 aa26.94■■□□□ 1.9
PKD1-223ENST00000561668 DDX17Q92841 729 aaKnown RBP26.93■■□□□ 1.9
PKD1-223ENST00000561668 SPATA31A6Q5VVP1 1343 aa26.92■■□□□ 1.9
PKD1-223ENST00000561668 L3MBTL2Q969R5 705 aa26.92■■□□□ 1.9
PKD1-223ENST00000561668 CDC42BPGQ6DT37 1551 aa26.92■■□□□ 1.9
PKD1-223ENST00000561668 CLSPNQ9HAW4 1339 aa26.91■■□□□ 1.9
PKD1-223ENST00000561668 MEX3CQ5U5Q3 659 aaKnown RBP26.89■■□□□ 1.9
PKD1-223ENST00000561668 ADGRB1O14514 1584 aa26.88■■□□□ 1.89
PKD1-223ENST00000561668 DLC1Q96QB1 1528 aa26.88■■□□□ 1.89
PKD1-223ENST00000561668 NHSL1Q5SYE7 1610 aa26.87■■□□□ 1.89
PKD1-223ENST00000561668 NUTM2BA6NNL0 878 aaPredicted RBP26.86■■□□□ 1.89
PKD1-223ENST00000561668 NUTM2EB1AL46 878 aaPredicted RBP26.86■■□□□ 1.89
PKD1-223ENST00000561668 NUTM2AQ8IVF1 878 aaPredicted RBP26.86■■□□□ 1.89
PKD1-223ENST00000561668 NPHP3Q7Z494 1330 aa26.86■■□□□ 1.89
PKD1-223ENST00000561668 FOXO3O43524 673 aa26.85■■□□□ 1.89
PKD1-223ENST00000561668 KIAA1210Q9ULL0 1709 aa26.85■■□□□ 1.89
PKD1-223ENST00000561668 SOS2Q07890 1332 aaPredicted RBP26.83■■□□□ 1.89
PKD1-223ENST00000561668 HIRIP3Q9BW71 556 aaPredicted RBP26.82■■□□□ 1.88
PKD1-223ENST00000561668 MINK1Q8N4C8 1332 aaPredicted RBP26.82■■□□□ 1.88
PKD1-223ENST00000561668 SHPRHQ149N8 1683 aa26.82■■□□□ 1.88
PKD1-223ENST00000561668 NBPF1Q3BBV0 1214 aa26.8■■□□□ 1.88
PKD1-223ENST00000561668 FMN2Q9NZ56 1722 aa26.79■■□□□ 1.88
PKD1-223ENST00000561668 RGS17Q9UGC6 210 aaPredicted RBP26.78■■□□□ 1.88
PKD1-223ENST00000561668 PHF8Q9UPP1 1060 aa26.78■■□□□ 1.88
PKD1-223ENST00000561668 EIF3AQ14152 1382 aaKnown RBP26.76■■□□□ 1.87
PKD1-223ENST00000561668 WASLO00401 505 aaPredicted RBP26.76■■□□□ 1.87
PKD1-223ENST00000561668 SOCS7O14512 581 aa26.76■■□□□ 1.87
PKD1-223ENST00000561668 XPCQ01831 940 aaPredicted RBP26.76■■□□□ 1.87
PKD1-223ENST00000561668 PNPLA6Q8IY17 1366 aa26.75■■□□□ 1.87
PKD1-223ENST00000561668 PSME1Q06323 249 aa26.75■■□□□ 1.87
PKD1-223ENST00000561668 TIMELESSQ9UNS1 1208 aa26.74■■□□□ 1.87
PKD1-223ENST00000561668 TONSLQ96HA7 1378 aa26.73■■□□□ 1.87
PKD1-223ENST00000561668 KRT28Q7Z3Y7 464 aa26.73■■□□□ 1.87
PKD1-223ENST00000561668 ZNF772Q68DY9 489 aaPredicted RBP26.72■■□□□ 1.87
PKD1-223ENST00000561668 LRP6O75581 1613 aa26.71■■□□□ 1.87
PKD1-223ENST00000561668 ANKARQ7Z5J8 1434 aa26.71■■□□□ 1.87
PKD1-223ENST00000561668 KIF1AQ12756 1690 aa26.7■■□□□ 1.87
PKD1-223ENST00000561668 PMFBP1Q8TBY8 1022 aa26.7■■□□□ 1.86
PKD1-223ENST00000561668 TRPM1Q7Z4N2 1603 aa26.69■■□□□ 1.86
PKD1-223ENST00000561668 ADGRB2O60241 1585 aa26.69■■□□□ 1.86
PKD1-223ENST00000561668 NBPF8Q3BBV2 869 aa26.69■■□□□ 1.86
PKD1-223ENST00000561668 ARHGEF28Q8N1W1 1705 aaKnown RBP26.69■■□□□ 1.86
PKD1-223ENST00000561668 RGPD8O14715 1765 aaPredicted RBP26.69■■□□□ 1.86
PKD1-223ENST00000561668 ADAMTS2O95450 1211 aa26.68■■□□□ 1.86
PKD1-223ENST00000561668 POTEAQ6S8J7 498 aa26.68■■□□□ 1.86
PKD1-223ENST00000561668 PXDNQ92626 1479 aa26.68■■□□□ 1.86
PKD1-223ENST00000561668 CDK19Q9BWU1 502 aa26.67■■□□□ 1.86
PKD1-223ENST00000561668 CENPJQ9HC77 1338 aaPredicted RBP26.66■■□□□ 1.86
PKD1-223ENST00000561668 C8orf37Q96NL8 207 aa26.66■■□□□ 1.86
PKD1-223ENST00000561668 GPRASP1Q5JY77 1395 aa26.66■■□□□ 1.86
PKD1-223ENST00000561668 NGLY1Q96IV0 654 aa26.65■■□□□ 1.86
PKD1-223ENST00000561668 ROCK2O75116 1388 aaKnown RBP26.65■■□□□ 1.86
PKD1-223ENST00000561668 LMOD2Q6P5Q4 547 aa26.64■■□□□ 1.86
PKD1-223ENST00000561668 NGDNQ8NEJ9 315 aaKnown RBP26.64■■□□□ 1.86
PKD1-223ENST00000561668 NUDT16Q96DE0 195 aaKnown RBP26.64■■□□□ 1.86
PKD1-223ENST00000561668 SPATA31A3Q5VYP0 1347 aa26.64■■□□□ 1.85
PKD1-223ENST00000561668 CCER1Q8TC90 406 aaPredicted RBP26.63■■□□□ 1.85
PKD1-223ENST00000561668 TULP4Q9NRJ4 1543 aa26.62■■□□□ 1.85
PKD1-223ENST00000561668 AFF2P51816 1311 aa26.62■■□□□ 1.85
PKD1-223ENST00000561668 PRR36Q9H6K5 1346 aa26.61■■□□□ 1.85
PKD1-223ENST00000561668 HAP1P54257 671 aaPredicted RBP26.6■■□□□ 1.85
PKD1-223ENST00000561668 SRPK2P78362 688 aaKnown RBP26.6■■□□□ 1.85
PKD1-223ENST00000561668 USP32Q8NFA0 1604 aa26.59■■□□□ 1.85
PKD1-223ENST00000561668 RALGAPBQ86X10 1494 aa26.58■■□□□ 1.85
PKD1-223ENST00000561668 CCDC61Q9Y6R9 512 aa26.58■■□□□ 1.85
PKD1-223ENST00000561668 SBNO1A3KN83 1393 aa26.58■■□□□ 1.84
PKD1-223ENST00000561668 RXRBP28702 533 aa26.56■■□□□ 1.84
PKD1-223ENST00000561668 COL22A1Q8NFW1 1626 aaPredicted RBP26.56■■□□□ 1.84
PKD1-223ENST00000561668 PAK3O75914 559 aaPredicted RBP26.55■■□□□ 1.84
PKD1-223ENST00000561668 CARD11Q9BXL7 1154 aa26.55■■□□□ 1.84
PKD1-223ENST00000561668 TNS3Q68CZ2 1445 aa26.55■■□□□ 1.84
PKD1-223ENST00000561668 PLEKHG5O94827 1062 aa26.54■■□□□ 1.84
PKD1-223ENST00000561668 QTRT2Q9H974 415 aaKnown RBP26.54■■□□□ 1.84
PKD1-223ENST00000561668 ARHGEF10O15013 1369 aa26.54■■□□□ 1.84
PKD1-223ENST00000561668 EVC2Q86UK5 1308 aa26.52■■□□□ 1.84
PKD1-223ENST00000561668 USP21Q9UK80 565 aa26.52■■□□□ 1.84
PKD1-223ENST00000561668 ITSN1Q15811 1721 aa26.51■■□□□ 1.83
PKD1-223ENST00000561668 CABP2Q9NPB3 220 aa26.51■■□□□ 1.83
PKD1-223ENST00000561668 ATP7BP35670 1465 aa26.5■■□□□ 1.83
PKD1-223ENST00000561668 FNBP4Q8N3X1 1017 aaPredicted RBP26.49■■□□□ 1.83
PKD1-223ENST00000561668 CABLES1Q8TDN4 633 aa26.49■■□□□ 1.83
PKD1-223ENST00000561668 QRICH2Q9H0J4 1663 aa26.49■■□□□ 1.83
PKD1-223ENST00000561668 ACEP12821 1306 aa26.48■■□□□ 1.83
PKD1-223ENST00000561668 PLEKHG3A1L390 1219 aa26.48■■□□□ 1.83
PKD1-223ENST00000561668 RBM6P78332 1123 aaKnown RBP26.45■■□□□ 1.82
PKD1-223ENST00000561668 TRPC5Q9UL62 973 aaPredicted RBP26.45■■□□□ 1.82
PKD1-223ENST00000561668 PPIP5K1Q6PFW1 1433 aa26.43■■□□□ 1.82
PKD1-223ENST00000561668 CABP1Q9NZU7 370 aa26.42■■□□□ 1.82
PKD1-223ENST00000561668 POLR3AO14802 1390 aaPredicted RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms