RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 CDC42BPGQ6DT37 1551 aa34.67■■■■□ 3.14
CDR2-202ENST00000561630 ADGRB1O14514 1584 aa34.65■■■■□ 3.14
CDR2-202ENST00000561630 ORAI2Q96SN7 254 aa34.64■■■■□ 3.14
CDR2-202ENST00000561630 NHSL1Q5SYE7 1610 aa34.62■■■■□ 3.13
CDR2-202ENST00000561630 DDX17Q92841 729 aaKnown RBP34.61■■■■□ 3.13
CDR2-202ENST00000561630 SPATA31A6Q5VVP1 1343 aa34.6■■■■□ 3.13
CDR2-202ENST00000561630 TRIM26Q12899 539 aaPredicted RBP34.6■■■■□ 3.13
CDR2-202ENST00000561630 PRAM1Q96QH2 718 aa34.6■■■■□ 3.13
CDR2-202ENST00000561630 DLC1Q96QB1 1528 aa34.59■■■■□ 3.13
CDR2-202ENST00000561630 LRRC59Q96AG4 307 aaKnown RBP34.58■■■■□ 3.13
CDR2-202ENST00000561630 ESCO1Q5FWF5 840 aa34.55■■■■□ 3.12
CDR2-202ENST00000561630 RGS17Q9UGC6 210 aaPredicted RBP34.55■■■■□ 3.12
CDR2-202ENST00000561630 POGKQ9P215 609 aa34.54■■■■□ 3.12
CDR2-202ENST00000561630 TRAK1Q9UPV9 953 aa34.54■■■■□ 3.12
CDR2-202ENST00000561630 SHPRHQ149N8 1683 aa34.53■■■■□ 3.12
CDR2-202ENST00000561630 SAFB2Q14151 953 aaKnown RBP eCLIP34.52■■■■□ 3.12
CDR2-202ENST00000561630 SOS2Q07890 1332 aaPredicted RBP34.52■■■■□ 3.12
CDR2-202ENST00000561630 NUTM2FA1L443 756 aa34.51■■■■□ 3.12
CDR2-202ENST00000561630 SIN3AQ96ST3 1273 aa34.49■■■■□ 3.11
CDR2-202ENST00000561630 LRP6O75581 1613 aa34.48■■■■□ 3.11
CDR2-202ENST00000561630 SOCS7O14512 581 aa34.48■■■■□ 3.11
CDR2-202ENST00000561630 NPHP3Q7Z494 1330 aa34.46■■■■□ 3.11
CDR2-202ENST00000561630 FMN2Q9NZ56 1722 aa34.45■■■■□ 3.11
CDR2-202ENST00000561630 L3MBTL2Q969R5 705 aa34.45■■■■□ 3.11
CDR2-202ENST00000561630 PNPLA6Q8IY17 1366 aa34.45■■■■□ 3.11
CDR2-202ENST00000561630 FOXO3O43524 673 aa34.43■■■■□ 3.1
CDR2-202ENST00000561630 NEUROD1Q13562 356 aa34.41■■■■□ 3.1
CDR2-202ENST00000561630 MEX3CQ5U5Q3 659 aaKnown RBP34.41■■■■□ 3.1
CDR2-202ENST00000561630 NUTM2BA6NNL0 878 aaPredicted RBP34.4■■■■□ 3.1
CDR2-202ENST00000561630 NUTM2EB1AL46 878 aaPredicted RBP34.4■■■■□ 3.1
CDR2-202ENST00000561630 NUTM2AQ8IVF1 878 aaPredicted RBP34.4■■■■□ 3.1
CDR2-202ENST00000561630 ADGRB2O60241 1585 aa34.39■■■■□ 3.1
CDR2-202ENST00000561630 NBPF1Q3BBV0 1214 aa34.38■■■■□ 3.09
CDR2-202ENST00000561630 HIRIP3Q9BW71 556 aaPredicted RBP34.38■■■■□ 3.09
CDR2-202ENST00000561630 PXDNQ92626 1479 aa34.38■■■■□ 3.09
CDR2-202ENST00000561630 KIAA1210Q9ULL0 1709 aa34.38■■■■□ 3.09
CDR2-202ENST00000561630 MINK1Q8N4C8 1332 aaPredicted RBP34.37■■■■□ 3.09
CDR2-202ENST00000561630 POTEAQ6S8J7 498 aa34.36■■■■□ 3.09
CDR2-202ENST00000561630 XPCQ01831 940 aaPredicted RBP34.34■■■■□ 3.09
CDR2-202ENST00000561630 ANKARQ7Z5J8 1434 aa34.34■■■■□ 3.09
CDR2-202ENST00000561630 PHF8Q9UPP1 1060 aa34.34■■■■□ 3.09
CDR2-202ENST00000561630 WASLO00401 505 aaPredicted RBP34.31■■■■□ 3.08
CDR2-202ENST00000561630 KIF1AQ12756 1690 aa34.31■■■■□ 3.08
CDR2-202ENST00000561630 EIF3AQ14152 1382 aaKnown RBP34.3■■■■□ 3.08
CDR2-202ENST00000561630 ARHGEF28Q8N1W1 1705 aaKnown RBP34.3■■■■□ 3.08
CDR2-202ENST00000561630 ZNF772Q68DY9 489 aaPredicted RBP34.27■■■■□ 3.08
CDR2-202ENST00000561630 KRT28Q7Z3Y7 464 aa34.26■■■■□ 3.08
CDR2-202ENST00000561630 USP32Q8NFA0 1604 aa34.25■■■■□ 3.07
CDR2-202ENST00000561630 PRR36Q9H6K5 1346 aa34.25■■■■□ 3.07
CDR2-202ENST00000561630 TULP4Q9NRJ4 1543 aa34.24■■■■□ 3.07
CDR2-202ENST00000561630 SPATA31A3Q5VYP0 1347 aa34.23■■■■□ 3.07
CDR2-202ENST00000561630 COL22A1Q8NFW1 1626 aaPredicted RBP34.22■■■■□ 3.07
CDR2-202ENST00000561630 RGPD8O14715 1765 aaPredicted RBP34.21■■■■□ 3.07
CDR2-202ENST00000561630 ADAMTS2O95450 1211 aa34.21■■■■□ 3.07
CDR2-202ENST00000561630 PSME1Q06323 249 aa34.21■■■■□ 3.07
CDR2-202ENST00000561630 PMFBP1Q8TBY8 1022 aa34.21■■■■□ 3.07
CDR2-202ENST00000561630 C8orf37Q96NL8 207 aa34.2■■■■□ 3.07
CDR2-202ENST00000561630 AFF2P51816 1311 aa34.2■■■■□ 3.07
CDR2-202ENST00000561630 CENPJQ9HC77 1338 aaPredicted RBP34.16■■■■□ 3.06
CDR2-202ENST00000561630 CDK19Q9BWU1 502 aa34.16■■■■□ 3.06
CDR2-202ENST00000561630 SBNO1A3KN83 1393 aa34.15■■■■□ 3.06
CDR2-202ENST00000561630 TNS3Q68CZ2 1445 aa34.14■■■■□ 3.06
CDR2-202ENST00000561630 NUDT16Q96DE0 195 aaKnown RBP34.14■■■■□ 3.06
CDR2-202ENST00000561630 NGLY1Q96IV0 654 aa34.14■■■■□ 3.06
CDR2-202ENST00000561630 TRPM1Q7Z4N2 1603 aa34.14■■■■□ 3.06
CDR2-202ENST00000561630 ATP7BP35670 1465 aa34.14■■■■□ 3.06
CDR2-202ENST00000561630 ROCK2O75116 1388 aaKnown RBP34.13■■■■□ 3.05
CDR2-202ENST00000561630 NBPF8Q3BBV2 869 aa34.13■■■■□ 3.05
CDR2-202ENST00000561630 TONSLQ96HA7 1378 aa34.12■■■■□ 3.05
CDR2-202ENST00000561630 GPRASP1Q5JY77 1395 aa34.1■■■■□ 3.05
CDR2-202ENST00000561630 NGDNQ8NEJ9 315 aaKnown RBP34.08■■■■□ 3.05
CDR2-202ENST00000561630 ARHGEF10O15013 1369 aa34.07■■■■□ 3.04
CDR2-202ENST00000561630 FNBP4Q8N3X1 1017 aaPredicted RBP34.06■■■■□ 3.04
CDR2-202ENST00000561630 RXRBP28702 533 aa34.05■■■■□ 3.04
CDR2-202ENST00000561630 CCDC61Q9Y6R9 512 aa34.05■■■■□ 3.04
CDR2-202ENST00000561630 LMOD2Q6P5Q4 547 aa34.04■■■■□ 3.04
CDR2-202ENST00000561630 QTRT2Q9H974 415 aaKnown RBP34.04■■■■□ 3.04
CDR2-202ENST00000561630 USP21Q9UK80 565 aa34.01■■■■□ 3.03
CDR2-202ENST00000561630 SRPK2P78362 688 aaKnown RBP34■■■■□ 3.03
CDR2-202ENST00000561630 ITSN1Q15811 1721 aa33.99■■■■□ 3.03
CDR2-202ENST00000561630 PLEKHG3A1L390 1219 aa33.99■■■■□ 3.03
CDR2-202ENST00000561630 CABLES1Q8TDN4 633 aa33.99■■■■□ 3.03
CDR2-202ENST00000561630 QRICH2Q9H0J4 1663 aa33.98■■■■□ 3.03
CDR2-202ENST00000561630 TRPM3Q9HCF6 1732 aaPredicted RBP33.98■■■■□ 3.03
CDR2-202ENST00000561630 POLR3AO14802 1390 aaPredicted RBP33.98■■■■□ 3.03
CDR2-202ENST00000561630 CABP2Q9NPB3 220 aa33.97■■■■□ 3.03
CDR2-202ENST00000561630 HAP1P54257 671 aaPredicted RBP33.96■■■■□ 3.03
CDR2-202ENST00000561630 RBM6P78332 1123 aaKnown RBP33.96■■■■□ 3.03
CDR2-202ENST00000561630 ACEP12821 1306 aa33.96■■■■□ 3.03
CDR2-202ENST00000561630 CARD11Q9BXL7 1154 aa33.95■■■■□ 3.03
CDR2-202ENST00000561630 PCGF6Q9BYE7 350 aa33.95■■■■□ 3.03
CDR2-202ENST00000561630 TOPAZ1Q8N9V7 1692 aa33.95■■■■□ 3.03
CDR2-202ENST00000561630 RALGAPBQ86X10 1494 aa33.95■■■■□ 3.02
CDR2-202ENST00000561630 CDK12Q9NYV4 1490 aaPredicted RBP33.95■■■■□ 3.02
CDR2-202ENST00000561630 TRPC5Q9UL62 973 aaPredicted RBP33.94■■■■□ 3.02
CDR2-202ENST00000561630 PAK3O75914 559 aaPredicted RBP33.93■■■■□ 3.02
CDR2-202ENST00000561630 PLEKHG5O94827 1062 aa33.93■■■■□ 3.02
CDR2-202ENST00000561630 EVC2Q86UK5 1308 aa33.93■■■■□ 3.02
CDR2-202ENST00000561630 BCL9LQ86UU0 1499 aa33.93■■■■□ 3.02
CDR2-202ENST00000561630 MARF1Q9Y4F3 1742 aaKnown RBP33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms