RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 DDX17Q92841 729 aaKnown RBP25.29■■□□□ 1.64
CDC42BPB-208ENST00000561271 SPATA31A6Q5VVP1 1343 aa25.28■■□□□ 1.64
CDC42BPB-208ENST00000561271 ADGRB1O14514 1584 aa25.27■■□□□ 1.64
CDC42BPB-208ENST00000561271 KIF1AQ12756 1690 aa25.26■■□□□ 1.63
CDC42BPB-208ENST00000561271 CFAP70Q5T0N1 1121 aa25.26■■□□□ 1.63
CDC42BPB-208ENST00000561271 WAPLQ7Z5K2 1190 aa25.26■■□□□ 1.63
CDC42BPB-208ENST00000561271 C14orf93Q9H972 538 aaKnown RBP25.26■■□□□ 1.63
CDC42BPB-208ENST00000561271 ARHGEF28Q8N1W1 1705 aaKnown RBP25.26■■□□□ 1.63
CDC42BPB-208ENST00000561271 ORAI2Q96SN7 254 aa25.24■■□□□ 1.63
CDC42BPB-208ENST00000561271 DLC1Q96QB1 1528 aa25.23■■□□□ 1.63
CDC42BPB-208ENST00000561271 MARF1Q9Y4F3 1742 aaKnown RBP25.23■■□□□ 1.63
CDC42BPB-208ENST00000561271 COL22A1Q8NFW1 1626 aaPredicted RBP25.22■■□□□ 1.63
CDC42BPB-208ENST00000561271 DHX57Q6P158 1386 aaKnown RBP25.21■■□□□ 1.63
CDC42BPB-208ENST00000561271 PNPLA6Q8IY17 1366 aa25.21■■□□□ 1.63
CDC42BPB-208ENST00000561271 ADGRB2O60241 1585 aa25.21■■□□□ 1.63
CDC42BPB-208ENST00000561271 KIAA1210Q9ULL0 1709 aa25.2■■□□□ 1.63
CDC42BPB-208ENST00000561271 MEX3CQ5U5Q3 659 aaKnown RBP25.2■■□□□ 1.62
CDC42BPB-208ENST00000561271 POTEAQ6S8J7 498 aa25.2■■□□□ 1.62
CDC42BPB-208ENST00000561271 USP32Q8NFA0 1604 aa25.19■■□□□ 1.62
CDC42BPB-208ENST00000561271 PXDNQ92626 1479 aa25.18■■□□□ 1.62
CDC42BPB-208ENST00000561271 NUTM2BA6NNL0 878 aaPredicted RBP25.18■■□□□ 1.62
CDC42BPB-208ENST00000561271 NUTM2EB1AL46 878 aaPredicted RBP25.18■■□□□ 1.62
CDC42BPB-208ENST00000561271 NUTM2AQ8IVF1 878 aaPredicted RBP25.18■■□□□ 1.62
CDC42BPB-208ENST00000561271 KDM2AQ9Y2K7 1162 aa25.18■■□□□ 1.62
CDC42BPB-208ENST00000561271 DCAF11Q8TEB1 546 aa25.17■■□□□ 1.62
CDC42BPB-208ENST00000561271 LRRC59Q96AG4 307 aaKnown RBP25.17■■□□□ 1.62
CDC42BPB-208ENST00000561271 NUTM2FA1L443 756 aa25.16■■□□□ 1.62
CDC42BPB-208ENST00000561271 SOS2Q07890 1332 aaPredicted RBP25.15■■□□□ 1.62
CDC42BPB-208ENST00000561271 ESCO1Q5FWF5 840 aa25.14■■□□□ 1.62
CDC42BPB-208ENST00000561271 SAFB2Q14151 953 aaKnown RBP eCLIP25.12■■□□□ 1.61
CDC42BPB-208ENST00000561271 SIRT1Q96EB6 747 aa25.12■■□□□ 1.61
CDC42BPB-208ENST00000561271 PRAM1Q96QH2 718 aa25.12■■□□□ 1.61
CDC42BPB-208ENST00000561271 ITSN1Q15811 1721 aa25.11■■□□□ 1.61
CDC42BPB-208ENST00000561271 ABCA3Q99758 1704 aa25.1■■□□□ 1.61
CDC42BPB-208ENST00000561271 NPHP3Q7Z494 1330 aa25.1■■□□□ 1.61
CDC42BPB-208ENST00000561271 XPCQ01831 940 aaPredicted RBP25.07■■□□□ 1.6
CDC42BPB-208ENST00000561271 TRAK1Q9UPV9 953 aa25.07■■□□□ 1.6
CDC42BPB-208ENST00000561271 POGKQ9P215 609 aa25.06■■□□□ 1.6
CDC42BPB-208ENST00000561271 FOXO3O43524 673 aa25.05■■□□□ 1.6
CDC42BPB-208ENST00000561271 STAC3Q96MF2 364 aa25.05■■□□□ 1.6
CDC42BPB-208ENST00000561271 TRPM3Q9HCF6 1732 aaPredicted RBP25.04■■□□□ 1.6
CDC42BPB-208ENST00000561271 ZNF772Q68DY9 489 aaPredicted RBP25.04■■□□□ 1.6
CDC42BPB-208ENST00000561271 AFF2P51816 1311 aa25.04■■□□□ 1.6
CDC42BPB-208ENST00000561271 TULP4Q9NRJ4 1543 aa25.02■■□□□ 1.6
CDC42BPB-208ENST00000561271 C8orf37Q96NL8 207 aa25.02■■□□□ 1.6
CDC42BPB-208ENST00000561271 ANKARQ7Z5J8 1434 aa25.02■■□□□ 1.6
CDC42BPB-208ENST00000561271 ADAMTS2O95450 1211 aa25.01■■□□□ 1.59
CDC42BPB-208ENST00000561271 TRPM1Q7Z4N2 1603 aa25.01■■□□□ 1.59
CDC42BPB-208ENST00000561271 TOPAZ1Q8N9V7 1692 aa25.01■■□□□ 1.59
CDC42BPB-208ENST00000561271 QRICH2Q9H0J4 1663 aa25.01■■□□□ 1.59
CDC42BPB-208ENST00000561271 HIRIP3Q9BW71 556 aaPredicted RBP25■■□□□ 1.59
CDC42BPB-208ENST00000561271 MINK1Q8N4C8 1332 aaPredicted RBP25■■□□□ 1.59
CDC42BPB-208ENST00000561271 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.98■■□□□ 1.59
CDC42BPB-208ENST00000561271 ALS2Q96Q42 1657 aa24.98■■□□□ 1.59
CDC42BPB-208ENST00000561271 PHF8Q9UPP1 1060 aa24.97■■□□□ 1.59
CDC42BPB-208ENST00000561271 PLCH1Q4KWH8 1693 aa24.97■■□□□ 1.59
CDC42BPB-208ENST00000561271 TNS3Q68CZ2 1445 aa24.95■■□□□ 1.59
CDC42BPB-208ENST00000561271 CRYBG1Q9Y4K1 1723 aa24.95■■□□□ 1.58
CDC42BPB-208ENST00000561271 EIF3AQ14152 1382 aaKnown RBP24.94■■□□□ 1.58
CDC42BPB-208ENST00000561271 SPATA31A3Q5VYP0 1347 aa24.93■■□□□ 1.58
CDC42BPB-208ENST00000561271 ATP7BP35670 1465 aa24.93■■□□□ 1.58
CDC42BPB-208ENST00000561271 CDK12Q9NYV4 1490 aaPredicted RBP24.93■■□□□ 1.58
CDC42BPB-208ENST00000561271 PRR36Q9H6K5 1346 aa24.92■■□□□ 1.58
CDC42BPB-208ENST00000561271 KRT28Q7Z3Y7 464 aa24.92■■□□□ 1.58
CDC42BPB-208ENST00000561271 NGLY1Q96IV0 654 aa24.92■■□□□ 1.58
CDC42BPB-208ENST00000561271 RXRBP28702 533 aa24.9■■□□□ 1.58
CDC42BPB-208ENST00000561271 SIN3AQ96ST3 1273 aa24.9■■□□□ 1.58
CDC42BPB-208ENST00000561271 NWD2Q9ULI1 1742 aa24.89■■□□□ 1.58
CDC42BPB-208ENST00000561271 RGS12O14924 1447 aa24.89■■□□□ 1.58
CDC42BPB-208ENST00000561271 NBPF1Q3BBV0 1214 aa24.89■■□□□ 1.58
CDC42BPB-208ENST00000561271 PMFBP1Q8TBY8 1022 aa24.89■■□□□ 1.58
CDC42BPB-208ENST00000561271 WASLO00401 505 aaPredicted RBP24.88■■□□□ 1.57
CDC42BPB-208ENST00000561271 L3MBTL2Q969R5 705 aa24.87■■□□□ 1.57
CDC42BPB-208ENST00000561271 SBNO1A3KN83 1393 aa24.87■■□□□ 1.57
CDC42BPB-208ENST00000561271 QTRT2Q9H974 415 aaKnown RBP24.85■■□□□ 1.57
CDC42BPB-208ENST00000561271 USP21Q9UK80 565 aa24.85■■□□□ 1.57
CDC42BPB-208ENST00000561271 PHRF1Q9P1Y6 1649 aaKnown RBP24.84■■□□□ 1.57
CDC42BPB-208ENST00000561271 PSME1Q06323 249 aa24.84■■□□□ 1.57
CDC42BPB-208ENST00000561271 ATRNO75882 1429 aa24.84■■□□□ 1.57
CDC42BPB-208ENST00000561271 NRAPQ86VF7 1730 aa24.83■■□□□ 1.57
CDC42BPB-208ENST00000561271 NEUROD1Q13562 356 aa24.83■■□□□ 1.57
CDC42BPB-208ENST00000561271 BCL9LQ86UU0 1499 aa24.83■■□□□ 1.56
CDC42BPB-208ENST00000561271 ARHGEF10O15013 1369 aa24.82■■□□□ 1.56
CDC42BPB-208ENST00000561271 PLEKHG5O94827 1062 aa24.82■■□□□ 1.56
CDC42BPB-208ENST00000561271 FNBP4Q8N3X1 1017 aaPredicted RBP24.82■■□□□ 1.56
CDC42BPB-208ENST00000561271 BRWD3Q6RI45 1802 aa24.82■■□□□ 1.56
CDC42BPB-208ENST00000561271 RBM6P78332 1123 aaKnown RBP24.81■■□□□ 1.56
CDC42BPB-208ENST00000561271 LMOD2Q6P5Q4 547 aa24.81■■□□□ 1.56
CDC42BPB-208ENST00000561271 GPRASP1Q5JY77 1395 aa24.8■■□□□ 1.56
CDC42BPB-208ENST00000561271 SLIT2O94813 1529 aa24.8■■□□□ 1.56
CDC42BPB-208ENST00000561271 CABLES1Q8TDN4 633 aa24.79■■□□□ 1.56
CDC42BPB-208ENST00000561271 GLI3P10071 1580 aa24.79■■□□□ 1.56
CDC42BPB-208ENST00000561271 COL14A1Q05707 1796 aaKnown RBP24.78■■□□□ 1.56
CDC42BPB-208ENST00000561271 TRPC5Q9UL62 973 aaPredicted RBP24.78■■□□□ 1.56
CDC42BPB-208ENST00000561271 HAP1P54257 671 aaPredicted RBP24.77■■□□□ 1.56
CDC42BPB-208ENST00000561271 NUDT16Q96DE0 195 aaKnown RBP24.77■■□□□ 1.56
CDC42BPB-208ENST00000561271 CDK19Q9BWU1 502 aa24.77■■□□□ 1.56
CDC42BPB-208ENST00000561271 CENPJQ9HC77 1338 aaPredicted RBP24.77■■□□□ 1.56
CDC42BPB-208ENST00000561271 NGDNQ8NEJ9 315 aaKnown RBP24.76■■□□□ 1.55
CDC42BPB-208ENST00000561271 AKAP12Q02952 1782 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms