RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 TXNDC2Q86VQ3 553 aa11.83□□□□□ -0.52
LRRC28-219ENST00000560483 POLR1AO95602 1720 aaPredicted RBP11.83□□□□□ -0.52
LRRC28-219ENST00000560483 PLA2R1Q13018 1463 aa11.83□□□□□ -0.52
LRRC28-219ENST00000560483 SYNMO15061 1565 aa11.82□□□□□ -0.52
LRRC28-219ENST00000560483 UBR1Q8IWV7 1749 aa11.82□□□□□ -0.52
LRRC28-219ENST00000560483 NOS1P29475 1434 aa11.8□□□□□ -0.52
LRRC28-219ENST00000560483 HDGFP51858 240 aaKnown RBP11.8□□□□□ -0.52
LRRC28-219ENST00000560483 SPHKAPQ2M3C7 1700 aa11.8□□□□□ -0.52
LRRC28-219ENST00000560483 RAB3GAP2Q9H2M9 1393 aa11.79□□□□□ -0.52
LRRC28-219ENST00000560483 PTPRTO14522 1441 aa11.79□□□□□ -0.52
LRRC28-219ENST00000560483 NUTM2DQ5VT03 806 aaPredicted RBP11.79□□□□□ -0.52
LRRC28-219ENST00000560483 ADGRB3O60242 1522 aa11.79□□□□□ -0.52
LRRC28-219ENST00000560483 MYO5BQ9ULV0 1848 aa11.79□□□□□ -0.52
LRRC28-219ENST00000560483 NPHP4O75161 1426 aaPredicted RBP11.78□□□□□ -0.52
LRRC28-219ENST00000560483 MPHOSPH9Q99550 1183 aa11.78□□□□□ -0.52
LRRC28-219ENST00000560483 ACIN1Q9UKV3 1341 aaKnown RBP11.78□□□□□ -0.52
LRRC28-219ENST00000560483 SCAF11Q99590 1463 aaKnown RBP11.77□□□□□ -0.52
LRRC28-219ENST00000560483 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
LRRC28-219ENST00000560483 MMRN1Q13201 1228 aa11.77□□□□□ -0.53
LRRC28-219ENST00000560483 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
LRRC28-219ENST00000560483 SPNS2Q8IVW8 549 aa11.77□□□□□ -0.53
LRRC28-219ENST00000560483 TMEM2Q9UHN6 1383 aa11.77□□□□□ -0.53
LRRC28-219ENST00000560483 IQGAP1P46940 1657 aa11.76□□□□□ -0.53
LRRC28-219ENST00000560483 LTKP29376 864 aa11.76□□□□□ -0.53
LRRC28-219ENST00000560483 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.76□□□□□ -0.53
LRRC28-219ENST00000560483 ZNF335Q9H4Z2 1342 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-219ENST00000560483 KIF1BO60333 1816 aa11.75□□□□□ -0.53
LRRC28-219ENST00000560483 CERKQ8TCT0 537 aa11.75□□□□□ -0.53
LRRC28-219ENST00000560483 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.74□□□□□ -0.53
LRRC28-219ENST00000560483 RIMS2Q9UQ26 1411 aa11.74□□□□□ -0.53
LRRC28-219ENST00000560483 NEURL4Q96JN8 1562 aa11.74□□□□□ -0.53
LRRC28-219ENST00000560483 SLIT1O75093 1534 aa11.73□□□□□ -0.53
LRRC28-219ENST00000560483 KDM5AP29375 1690 aaKnown RBP11.73□□□□□ -0.53
LRRC28-219ENST00000560483 SLC26A8Q96RN1 970 aa11.73□□□□□ -0.53
LRRC28-219ENST00000560483 TMEM131LA2VDJ0 1609 aa11.72□□□□□ -0.53
LRRC28-219ENST00000560483 TRPM2O94759 1503 aa11.72□□□□□ -0.53
LRRC28-219ENST00000560483 CCDC144AA2RUR9 1427 aa11.72□□□□□ -0.53
LRRC28-219ENST00000560483 RGL3Q3MIN7 710 aa11.72□□□□□ -0.53
LRRC28-219ENST00000560483 CLTCL1P53675 1640 aa11.71□□□□□ -0.53
LRRC28-219ENST00000560483 ARHGAP23Q9P227 1491 aa11.71□□□□□ -0.53
LRRC28-219ENST00000560483 VASPP50552 380 aaPredicted RBP11.71□□□□□ -0.53
LRRC28-219ENST00000560483 TRIM26Q12899 539 aaPredicted RBP11.71□□□□□ -0.53
LRRC28-219ENST00000560483 TMEM121BQ9BXQ6 578 aaPredicted RBP11.71□□□□□ -0.53
LRRC28-219ENST00000560483 DPY19L2Q6NUT2 758 aa11.7□□□□□ -0.54
LRRC28-219ENST00000560483 MED14O60244 1454 aa11.7□□□□□ -0.54
LRRC28-219ENST00000560483 ILDR1Q86SU0 546 aaPredicted RBP11.68□□□□□ -0.54
LRRC28-219ENST00000560483 KRTAP3-3Q9BYR6 98 aa11.68□□□□□ -0.54
LRRC28-219ENST00000560483 KRTAP3-2Q9BYR7 98 aa11.68□□□□□ -0.54
LRRC28-219ENST00000560483 C14orf37Q86TY3 774 aa11.67□□□□□ -0.54
LRRC28-219ENST00000560483 FBXO41Q8TF61 875 aa11.67□□□□□ -0.54
LRRC28-219ENST00000560483 PLEKHG1Q9ULL1 1385 aa11.67□□□□□ -0.54
LRRC28-219ENST00000560483 UBAP1LF5GYI3 381 aa11.66□□□□□ -0.54
LRRC28-219ENST00000560483 PSEN1P49768 467 aa11.66□□□□□ -0.54
LRRC28-219ENST00000560483 ZFYVE9O95405 1425 aa11.66□□□□□ -0.54
LRRC28-219ENST00000560483 CPS1P31327 1500 aa11.65□□□□□ -0.54
LRRC28-219ENST00000560483 LTBP4Q8N2S1 1624 aa11.65□□□□□ -0.54
LRRC28-219ENST00000560483 VGFO15240 615 aaPredicted RBP11.65□□□□□ -0.54
LRRC28-219ENST00000560483 HRCP23327 699 aa11.65□□□□□ -0.54
LRRC28-219ENST00000560483 C3orf67Q6ZVT6 689 aa11.65□□□□□ -0.54
LRRC28-219ENST00000560483 ZNF467Q7Z7K2 595 aaPredicted RBP11.65□□□□□ -0.54
LRRC28-219ENST00000560483 PROSER2Q86WR7 435 aaPredicted RBP11.65□□□□□ -0.54
LRRC28-219ENST00000560483 KLHL34Q8N239 644 aa11.65□□□□□ -0.54
LRRC28-219ENST00000560483 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.65□□□□□ -0.54
LRRC28-219ENST00000560483 EMP3P54852 163 aa11.64□□□□□ -0.55
LRRC28-219ENST00000560483 PIP4K2BP78356 416 aa11.64□□□□□ -0.55
LRRC28-219ENST00000560483 SNPHO15079 494 aa11.63□□□□□ -0.55
LRRC28-219ENST00000560483 MKRN3Q13064 507 aaKnown RBP11.63□□□□□ -0.55
LRRC28-219ENST00000560483 RBM33Q96EV2 1170 aaKnown RBP11.63□□□□□ -0.55
LRRC28-219ENST00000560483 FBXO3Q9UK99 471 aa11.63□□□□□ -0.55
LRRC28-219ENST00000560483 RPGRIP1LQ68CZ1 1315 aa11.62□□□□□ -0.55
LRRC28-219ENST00000560483 TOM1O60784 492 aa11.62□□□□□ -0.55
LRRC28-219ENST00000560483 KCNA6P17658 529 aa11.62□□□□□ -0.55
LRRC28-219ENST00000560483 HS3ST6Q96QI5 342 aa11.62□□□□□ -0.55
LRRC28-219ENST00000560483 NEXMIFQ5QGS0 1516 aa11.61□□□□□ -0.55
LRRC28-219ENST00000560483 GSE1Q14687 1217 aa11.61□□□□□ -0.55
LRRC28-219ENST00000560483 KDM2AQ9Y2K7 1162 aa11.61□□□□□ -0.55
LRRC28-219ENST00000560483 TBX22Q9Y458 520 aa11.61□□□□□ -0.55
LRRC28-219ENST00000560483 STRCP1A6NGW2 1772 aa11.61□□□□□ -0.55
LRRC28-219ENST00000560483 PCGF6Q9BYE7 350 aa11.6□□□□□ -0.55
LRRC28-219ENST00000560483 PPLO60437 1756 aa11.59□□□□□ -0.55
LRRC28-219ENST00000560483 FAM205CA6NFA0 338 aa11.59□□□□□ -0.55
LRRC28-219ENST00000560483 CHRM1P11229 460 aaPredicted RBP11.59□□□□□ -0.55
LRRC28-219ENST00000560483 GOLGA2Q08379 1002 aa11.59□□□□□ -0.55
LRRC28-219ENST00000560483 AMOTL2Q9Y2J4 779 aa11.59□□□□□ -0.55
LRRC28-219ENST00000560483 DIP2AQ14689 1571 aa11.58□□□□□ -0.55
LRRC28-219ENST00000560483 IQSEC2Q5JU85 1478 aa11.58□□□□□ -0.56
LRRC28-219ENST00000560483 TMEM94Q12767 1356 aa11.58□□□□□ -0.56
LRRC28-219ENST00000560483 ANKRD30BQ9BXX2 1392 aa11.58□□□□□ -0.56
LRRC28-219ENST00000560483 NEUROD1Q13562 356 aa11.58□□□□□ -0.56
LRRC28-219ENST00000560483 LRRC7Q96NW7 1537 aa11.58□□□□□ -0.56
LRRC28-219ENST00000560483 HOXB3P14651 431 aaPredicted RBP11.57□□□□□ -0.56
LRRC28-219ENST00000560483 DCAF11Q8TEB1 546 aa11.57□□□□□ -0.56
LRRC28-219ENST00000560483 CABP2Q9NPB3 220 aa11.57□□□□□ -0.56
LRRC28-219ENST00000560483 STK26Q9P289 416 aa11.57□□□□□ -0.56
LRRC28-219ENST00000560483 CHD2O14647 1828 aaKnown RBP11.57□□□□□ -0.56
LRRC28-219ENST00000560483 ADAMTS13Q76LX8 1427 aa11.57□□□□□ -0.56
LRRC28-219ENST00000560483 ADGRF5Q8IZF2 1346 aa11.57□□□□□ -0.56
LRRC28-219ENST00000560483 MSH6P52701 1360 aa11.56□□□□□ -0.56
LRRC28-219ENST00000560483 SPATA31E1Q6ZUB1 1445 aa11.56□□□□□ -0.56
LRRC28-219ENST00000560483 L3MBTL3Q96JM7 780 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms