RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 ABCA6Q8N139 1617 aa24.24■■□□□ 1.47
SEMA4B-215ENST00000560089 MAGI2Q86UL8 1455 aa24.23■■□□□ 1.47
SEMA4B-215ENST00000560089 MLH3Q9UHC1 1453 aa24.23■■□□□ 1.47
SEMA4B-215ENST00000560089 PPRC1Q5VV67 1664 aaKnown RBP24.23■■□□□ 1.47
SEMA4B-215ENST00000560089 ZSCAN20P17040 1043 aaPredicted RBP24.22■■□□□ 1.47
SEMA4B-215ENST00000560089 ANP32BQ92688 251 aaKnown RBP24.22■■□□□ 1.47
SEMA4B-215ENST00000560089 KIF13AQ9H1H9 1805 aa24.22■■□□□ 1.47
SEMA4B-215ENST00000560089 CCDC173Q0VFZ6 552 aa24.21■■□□□ 1.47
SEMA4B-215ENST00000560089 CCDC144AA2RUR9 1427 aa24.21■■□□□ 1.47
SEMA4B-215ENST00000560089 RICTORQ6R327 1708 aa24.21■■□□□ 1.47
SEMA4B-215ENST00000560089 FRMPD1Q5SYB0 1578 aa24.21■■□□□ 1.47
SEMA4B-215ENST00000560089 DDX11L8A8MPP1 907 aa24.2■■□□□ 1.47
SEMA4B-215ENST00000560089 PAXIP1Q6ZW49 1069 aaPredicted RBP24.2■■□□□ 1.46
SEMA4B-215ENST00000560089 CHMP5Q9NZZ3 219 aa24.2■■□□□ 1.46
SEMA4B-215ENST00000560089 GAS2L3Q86XJ1 694 aa24.19■■□□□ 1.46
SEMA4B-215ENST00000560089 KANK1Q14678 1352 aa24.19■■□□□ 1.46
SEMA4B-215ENST00000560089 TMEM51Q9NW97 253 aa24.19■■□□□ 1.46
SEMA4B-215ENST00000560089 TRHP20396 242 aaPredicted RBP24.18■■□□□ 1.46
SEMA4B-215ENST00000560089 DYNC1I1O14576 645 aa24.17■■□□□ 1.46
SEMA4B-215ENST00000560089 CCDC94Q9BW85 323 aaPredicted RBP24.17■■□□□ 1.46
SEMA4B-215ENST00000560089 UPF2Q9HAU5 1272 aaKnown RBP24.17■■□□□ 1.46
SEMA4B-215ENST00000560089 NLRP1Q9C000 1473 aa24.17■■□□□ 1.46
SEMA4B-215ENST00000560089 COL17A1Q9UMD9 1497 aaPredicted RBP24.16■■□□□ 1.46
SEMA4B-215ENST00000560089 RALBP1Q15311 655 aa24.16■■□□□ 1.46
SEMA4B-215ENST00000560089 MROH1Q8NDA8 1641 aa24.16■■□□□ 1.46
SEMA4B-215ENST00000560089 E9PCH4 1651 aa24.15■■□□□ 1.46
SEMA4B-215ENST00000560089 DEPDC5O75140 1603 aa24.15■■□□□ 1.46
SEMA4B-215ENST00000560089 KIF20AO95235 890 aa24.15■■□□□ 1.46
SEMA4B-215ENST00000560089 PPP1R9BQ96SB3 815 aa24.15■■□□□ 1.46
SEMA4B-215ENST00000560089 DIP2CQ9Y2E4 1556 aa24.14■■□□□ 1.46
SEMA4B-215ENST00000560089 BCORL1Q5H9F3 1711 aa24.14■■□□□ 1.45
SEMA4B-215ENST00000560089 ROCK2O75116 1388 aaKnown RBP24.12■■□□□ 1.45
SEMA4B-215ENST00000560089 GTPBP4Q9BZE4 634 aaKnown RBP24.12■■□□□ 1.45
SEMA4B-215ENST00000560089 CFAP65Q6ZU64 1925 aaKnown RBP24.11■■□□□ 1.45
SEMA4B-215ENST00000560089 KLHL34Q8N239 644 aa24.11■■□□□ 1.45
SEMA4B-215ENST00000560089 VGLL3A8MV65 326 aa24.11■■□□□ 1.45
SEMA4B-215ENST00000560089 TBC1D32Q96NH3 1257 aa24.11■■□□□ 1.45
SEMA4B-215ENST00000560089 EIF2AK4Q9P2K8 1649 aaKnown RBP24.1■■□□□ 1.45
SEMA4B-215ENST00000560089 ATP10AO60312 1499 aa24.1■■□□□ 1.45
SEMA4B-215ENST00000560089 PRDM15P57071 1507 aaPredicted RBP24.1■■□□□ 1.45
SEMA4B-215ENST00000560089 MLECQ14165 292 aa24.1■■□□□ 1.45
SEMA4B-215ENST00000560089 USP47Q96K76 1375 aa24.09■■□□□ 1.45
SEMA4B-215ENST00000560089 CEP152O94986 1710 aa24.09■■□□□ 1.45
SEMA4B-215ENST00000560089 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.09■■□□□ 1.45
SEMA4B-215ENST00000560089 NASPP49321 788 aaPredicted RBP24.08■■□□□ 1.45
SEMA4B-215ENST00000560089 PLCD3Q8N3E9 789 aa24.08■■□□□ 1.45
SEMA4B-215ENST00000560089 ZNF830Q96NB3 372 aaPredicted RBP24.08■■□□□ 1.45
SEMA4B-215ENST00000560089 LETM1O95202 739 aaPredicted RBP24.07■■□□□ 1.44
SEMA4B-215ENST00000560089 UGGT1Q9NYU2 1555 aa24.07■■□□□ 1.44
SEMA4B-215ENST00000560089 NLRP13Q86W25 1043 aa24.07■■□□□ 1.44
SEMA4B-215ENST00000560089 MAPK8IP3Q9UPT6 1336 aa24.07■■□□□ 1.44
SEMA4B-215ENST00000560089 VWDEQ8N2E2 1590 aa24.06■■□□□ 1.44
SEMA4B-215ENST00000560089 XPCQ01831 940 aaPredicted RBP24.06■■□□□ 1.44
SEMA4B-215ENST00000560089 TET3O43151 1660 aa24.05■■□□□ 1.44
SEMA4B-215ENST00000560089 CHGAP10645 457 aaKnown RBP24.03■■□□□ 1.44
SEMA4B-215ENST00000560089 ZNF500O60304 480 aaPredicted RBP24.02■■□□□ 1.44
SEMA4B-215ENST00000560089 RNF17Q9BXT8 1623 aaKnown RBP24.01■■□□□ 1.43
SEMA4B-215ENST00000560089 IGHDP01880 384 aa24■■□□□ 1.43
SEMA4B-215ENST00000560089 SPHKAPQ2M3C7 1700 aa24■■□□□ 1.43
SEMA4B-215ENST00000560089 SASS6Q6UVJ0 657 aa24■■□□□ 1.43
SEMA4B-215ENST00000560089 CBX1P83916 185 aa23.99■■□□□ 1.43
SEMA4B-215ENST00000560089 CSPP1Q1MSJ5 1256 aa23.99■■□□□ 1.43
SEMA4B-215ENST00000560089 EFCAB6Q5THR3 1501 aa23.99■■□□□ 1.43
SEMA4B-215ENST00000560089 SKOR2Q2VWA4 1001 aaPredicted RBP23.99■■□□□ 1.43
SEMA4B-215ENST00000560089 NBPF1Q3BBV0 1214 aa23.99■■□□□ 1.43
SEMA4B-215ENST00000560089 NOL7Q9UMY1 257 aaKnown RBP23.99■■□□□ 1.43
SEMA4B-215ENST00000560089 CLTCL1P53675 1640 aa23.99■■□□□ 1.43
SEMA4B-215ENST00000560089 NPATQ14207 1427 aa23.99■■□□□ 1.43
SEMA4B-215ENST00000560089 HS1BP3Q53T59 392 aa23.98■■□□□ 1.43
SEMA4B-215ENST00000560089 CARD11Q9BXL7 1154 aa23.98■■□□□ 1.43
SEMA4B-215ENST00000560089 ZMYM4Q5VZL5 1548 aa23.98■■□□□ 1.43
SEMA4B-215ENST00000560089 PTPRTO14522 1441 aa23.97■■□□□ 1.43
SEMA4B-215ENST00000560089 DNAJC5Q9H3Z4 198 aa23.97■■□□□ 1.43
SEMA4B-215ENST00000560089 SENP3Q9H4L4 574 aaPredicted RBP23.97■■□□□ 1.43
SEMA4B-215ENST00000560089 TRPM2O94759 1503 aa23.97■■□□□ 1.43
SEMA4B-215ENST00000560089 CDK11BP21127 795 aaKnown RBP23.97■■□□□ 1.43
SEMA4B-215ENST00000560089 EIF3AQ14152 1382 aaKnown RBP23.96■■□□□ 1.43
SEMA4B-215ENST00000560089 TAF3Q5VWG9 929 aa23.96■■□□□ 1.43
SEMA4B-215ENST00000560089 BLMP54132 1417 aaPredicted RBP23.96■■□□□ 1.43
SEMA4B-215ENST00000560089 ABCC3O15438 1527 aa23.96■■□□□ 1.43
SEMA4B-215ENST00000560089 FTSJ3Q8IY81 847 aaKnown RBP23.95■■□□□ 1.42
SEMA4B-215ENST00000560089 SIGLEC1Q9BZZ2 1709 aa23.95■■□□□ 1.42
SEMA4B-215ENST00000560089 GBP4Q96PP9 640 aa23.94■■□□□ 1.42
SEMA4B-215ENST00000560089 ZNF692Q9BU19 519 aaPredicted RBP23.92■■□□□ 1.42
SEMA4B-215ENST00000560089 FBXO31Q5XUX0 539 aaPredicted RBP23.92■■□□□ 1.42
SEMA4B-215ENST00000560089 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.92■■□□□ 1.42
SEMA4B-215ENST00000560089 UHRF1BP1Q6BDS2 1440 aa23.91■■□□□ 1.42
SEMA4B-215ENST00000560089 DUSP27Q5VZP5 1158 aa23.91■■□□□ 1.42
SEMA4B-215ENST00000560089 TNPO1Q92973 898 aaKnown RBP23.91■■□□□ 1.42
SEMA4B-215ENST00000560089 PRAG1Q86YV5 1406 aa23.91■■□□□ 1.42
SEMA4B-215ENST00000560089 PTMSP20962 102 aa23.9■■□□□ 1.42
SEMA4B-215ENST00000560089 NUTM2DQ5VT03 806 aaPredicted RBP23.9■■□□□ 1.42
SEMA4B-215ENST00000560089 HSCBQ8IWL3 235 aa23.9■■□□□ 1.42
SEMA4B-215ENST00000560089 LMTK2Q8IWU2 1503 aa23.9■■□□□ 1.42
SEMA4B-215ENST00000560089 AMER1Q5JTC6 1135 aaPredicted RBP23.89■■□□□ 1.41
SEMA4B-215ENST00000560089 PARD3Q8TEW0 1356 aa23.89■■□□□ 1.41
SEMA4B-215ENST00000560089 CGNQ9P2M7 1197 aaKnown RBP23.88■■□□□ 1.41
SEMA4B-215ENST00000560089 INSRP06213 1382 aa23.88■■□□□ 1.41
SEMA4B-215ENST00000560089 ZBTB22O15209 634 aa23.88■■□□□ 1.41
SEMA4B-215ENST00000560089 DNTTIP2Q5QJE6 756 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms