RNA–Protein interactions for RNA: ENST00000560003.1

SEMA4B-214, Transcript of semaphorin 4B, humanhuman

TSL 3

Gene SEMA4B, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-214ENST00000560003 ESCO1Q5FWF5 840 aa12.9□□□□□ -0.34
SEMA4B-214ENST00000560003 LRRC59Q96AG4 307 aaKnown RBP12.9□□□□□ -0.34
SEMA4B-214ENST00000560003 LAMC1P11047 1609 aa12.9□□□□□ -0.34
SEMA4B-214ENST00000560003 TONSLQ96HA7 1378 aa12.9□□□□□ -0.34
SEMA4B-214ENST00000560003 IFT172Q9UG01 1749 aa12.9□□□□□ -0.34
SEMA4B-214ENST00000560003 XIRP1Q702N8 1843 aaKnown RBP12.9□□□□□ -0.34
SEMA4B-214ENST00000560003 CLSPNQ9HAW4 1339 aa12.89□□□□□ -0.35
SEMA4B-214ENST00000560003 MST1RQ04912 1400 aa12.88□□□□□ -0.35
SEMA4B-214ENST00000560003 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.88□□□□□ -0.35
SEMA4B-214ENST00000560003 SAFB2Q14151 953 aaKnown RBP eCLIP12.88□□□□□ -0.35
SEMA4B-214ENST00000560003 TIMELESSQ9UNS1 1208 aa12.88□□□□□ -0.35
SEMA4B-214ENST00000560003 EIF3AQ14152 1382 aaKnown RBP12.88□□□□□ -0.35
SEMA4B-214ENST00000560003 JCADQ9P266 1359 aa12.88□□□□□ -0.35
SEMA4B-214ENST00000560003 C1orf167Q5SNV9 1468 aa12.87□□□□□ -0.35
SEMA4B-214ENST00000560003 DISP3Q9P2K9 1392 aa12.87□□□□□ -0.35
SEMA4B-214ENST00000560003 SETD1AO15047 1707 aaKnown RBP12.87□□□□□ -0.35
SEMA4B-214ENST00000560003 PLEKHH1Q9ULM0 1364 aa12.86□□□□□ -0.35
SEMA4B-214ENST00000560003 NBPF1Q3BBV0 1214 aa12.86□□□□□ -0.35
SEMA4B-214ENST00000560003 ORAI2Q96SN7 254 aa12.86□□□□□ -0.35
SEMA4B-214ENST00000560003 DLC1Q96QB1 1528 aa12.86□□□□□ -0.35
SEMA4B-214ENST00000560003 SPATA31A6Q5VVP1 1343 aa12.86□□□□□ -0.35
SEMA4B-214ENST00000560003 NPHP3Q7Z494 1330 aa12.86□□□□□ -0.35
SEMA4B-214ENST00000560003 PSME1Q06323 249 aa12.85□□□□□ -0.35
SEMA4B-214ENST00000560003 ROBO1Q9Y6N7 1651 aa12.85□□□□□ -0.35
SEMA4B-214ENST00000560003 NUTM2FA1L443 756 aa12.84□□□□□ -0.35
SEMA4B-214ENST00000560003 WASLO00401 505 aaPredicted RBP12.84□□□□□ -0.35
SEMA4B-214ENST00000560003 ADGRB1O14514 1584 aa12.84□□□□□ -0.35
SEMA4B-214ENST00000560003 MINK1Q8N4C8 1332 aaPredicted RBP12.84□□□□□ -0.35
SEMA4B-214ENST00000560003 ASXL1Q8IXJ9 1541 aa12.83□□□□□ -0.35
SEMA4B-214ENST00000560003 FOXO3O43524 673 aa12.83□□□□□ -0.36
SEMA4B-214ENST00000560003 SLC24A1O60721 1099 aa12.83□□□□□ -0.36
SEMA4B-214ENST00000560003 CCER1Q8TC90 406 aaPredicted RBP12.83□□□□□ -0.36
SEMA4B-214ENST00000560003 PHF8Q9UPP1 1060 aa12.83□□□□□ -0.36
SEMA4B-214ENST00000560003 ROCK2O75116 1388 aaKnown RBP12.82□□□□□ -0.36
SEMA4B-214ENST00000560003 HIRIP3Q9BW71 556 aaPredicted RBP12.82□□□□□ -0.36
SEMA4B-214ENST00000560003 SOS2Q07890 1332 aaPredicted RBP12.82□□□□□ -0.36
SEMA4B-214ENST00000560003 CENPJQ9HC77 1338 aaPredicted RBP12.82□□□□□ -0.36
SEMA4B-214ENST00000560003 CDC42BPGQ6DT37 1551 aa12.81□□□□□ -0.36
SEMA4B-214ENST00000560003 MEX3CQ5U5Q3 659 aaKnown RBP12.81□□□□□ -0.36
SEMA4B-214ENST00000560003 KNDC1Q76NI1 1749 aa12.81□□□□□ -0.36
SEMA4B-214ENST00000560003 CDK19Q9BWU1 502 aa12.8□□□□□ -0.36
SEMA4B-214ENST00000560003 CARD11Q9BXL7 1154 aa12.8□□□□□ -0.36
SEMA4B-214ENST00000560003 AHDC1Q5TGY3 1603 aaPredicted RBP12.8□□□□□ -0.36
SEMA4B-214ENST00000560003 ANKARQ7Z5J8 1434 aa12.79□□□□□ -0.36
SEMA4B-214ENST00000560003 KRT28Q7Z3Y7 464 aa12.79□□□□□ -0.36
SEMA4B-214ENST00000560003 DDX17Q92841 729 aaKnown RBP12.79□□□□□ -0.36
SEMA4B-214ENST00000560003 CCDC61Q9Y6R9 512 aa12.79□□□□□ -0.36
SEMA4B-214ENST00000560003 NALCNQ8IZF0 1738 aa12.79□□□□□ -0.36
SEMA4B-214ENST00000560003 KIAA1210Q9ULL0 1709 aa12.79□□□□□ -0.36
SEMA4B-214ENST00000560003 NBPF8Q3BBV2 869 aa12.78□□□□□ -0.36
SEMA4B-214ENST00000560003 NGDNQ8NEJ9 315 aaKnown RBP12.78□□□□□ -0.36
SEMA4B-214ENST00000560003 NUDT16Q96DE0 195 aaKnown RBP12.78□□□□□ -0.36
SEMA4B-214ENST00000560003 PHLPP1O60346 1717 aa12.77□□□□□ -0.36
SEMA4B-214ENST00000560003 NUTM2BA6NNL0 878 aaPredicted RBP12.77□□□□□ -0.37
SEMA4B-214ENST00000560003 NUTM2EB1AL46 878 aaPredicted RBP12.77□□□□□ -0.37
SEMA4B-214ENST00000560003 SRPK2P78362 688 aaKnown RBP12.77□□□□□ -0.37
SEMA4B-214ENST00000560003 NUTM2AQ8IVF1 878 aaPredicted RBP12.77□□□□□ -0.37
SEMA4B-214ENST00000560003 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.37
SEMA4B-214ENST00000560003 EVC2Q86UK5 1308 aa12.77□□□□□ -0.37
SEMA4B-214ENST00000560003 GPRASP1Q5JY77 1395 aa12.77□□□□□ -0.37
SEMA4B-214ENST00000560003 ZNF772Q68DY9 489 aaPredicted RBP12.75□□□□□ -0.37
SEMA4B-214ENST00000560003 PMFBP1Q8TBY8 1022 aa12.75□□□□□ -0.37
SEMA4B-214ENST00000560003 XPCQ01831 940 aaPredicted RBP12.74□□□□□ -0.37
SEMA4B-214ENST00000560003 COL16A1Q07092 1604 aaPredicted RBP12.73□□□□□ -0.37
SEMA4B-214ENST00000560003 SBNO1A3KN83 1393 aa12.73□□□□□ -0.37
SEMA4B-214ENST00000560003 SPATA31A3Q5VYP0 1347 aa12.73□□□□□ -0.37
SEMA4B-214ENST00000560003 PLEKHG3A1L390 1219 aa12.73□□□□□ -0.37
SEMA4B-214ENST00000560003 LMOD2Q6P5Q4 547 aa12.73□□□□□ -0.37
SEMA4B-214ENST00000560003 MED1Q15648 1581 aaPredicted RBP12.73□□□□□ -0.37
SEMA4B-214ENST00000560003 PNPLA6Q8IY17 1366 aa12.72□□□□□ -0.37
SEMA4B-214ENST00000560003 HAP1P54257 671 aaPredicted RBP12.72□□□□□ -0.37
SEMA4B-214ENST00000560003 NGLY1Q96IV0 654 aa12.72□□□□□ -0.37
SEMA4B-214ENST00000560003 ADGRB2O60241 1585 aa12.72□□□□□ -0.37
SEMA4B-214ENST00000560003 ARHGEF10O15013 1369 aa12.71□□□□□ -0.37
SEMA4B-214ENST00000560003 PRR36Q9H6K5 1346 aa12.71□□□□□ -0.37
SEMA4B-214ENST00000560003 PUS7Q96PZ0 661 aaKnown RBP12.71□□□□□ -0.37
SEMA4B-214ENST00000560003 CABP2Q9NPB3 220 aa12.71□□□□□ -0.37
SEMA4B-214ENST00000560003 TULP4Q9NRJ4 1543 aa12.71□□□□□ -0.38
SEMA4B-214ENST00000560003 NHSL1Q5SYE7 1610 aa12.7□□□□□ -0.38
SEMA4B-214ENST00000560003 PAK3O75914 559 aaPredicted RBP12.7□□□□□ -0.38
SEMA4B-214ENST00000560003 ADAMTS2O95450 1211 aa12.7□□□□□ -0.38
SEMA4B-214ENST00000560003 ZNF692Q9BU19 519 aaPredicted RBP12.7□□□□□ -0.38
SEMA4B-214ENST00000560003 FMN2Q9NZ56 1722 aa12.7□□□□□ -0.38
SEMA4B-214ENST00000560003 C8orf37Q96NL8 207 aa12.69□□□□□ -0.38
SEMA4B-214ENST00000560003 RALGAPBQ86X10 1494 aa12.69□□□□□ -0.38
SEMA4B-214ENST00000560003 PXDNQ92626 1479 aa12.69□□□□□ -0.38
SEMA4B-214ENST00000560003 ACEP12821 1306 aa12.68□□□□□ -0.38
SEMA4B-214ENST00000560003 KIF1AQ12756 1690 aa12.68□□□□□ -0.38
SEMA4B-214ENST00000560003 CDCA8Q53HL2 280 aa12.68□□□□□ -0.38
SEMA4B-214ENST00000560003 CABP1Q9NZU7 370 aa12.68□□□□□ -0.38
SEMA4B-214ENST00000560003 BRD4O60885 1362 aaPredicted RBP12.68□□□□□ -0.38
SEMA4B-214ENST00000560003 SBNO2Q9Y2G9 1366 aa12.68□□□□□ -0.38
SEMA4B-214ENST00000560003 TRPM1Q7Z4N2 1603 aa12.67□□□□□ -0.38
SEMA4B-214ENST00000560003 RGS17Q9UGC6 210 aaPredicted RBP12.67□□□□□ -0.38
SEMA4B-214ENST00000560003 ATAD2Q6PL18 1390 aa12.67□□□□□ -0.38
SEMA4B-214ENST00000560003 SHPRHQ149N8 1683 aa12.67□□□□□ -0.38
SEMA4B-214ENST00000560003 ARHGEF28Q8N1W1 1705 aaKnown RBP12.66□□□□□ -0.38
SEMA4B-214ENST00000560003 TNS3Q68CZ2 1445 aa12.66□□□□□ -0.38
SEMA4B-214ENST00000560003 ST20-MTHFSA0A0A6YYL1 179 aa12.66□□□□□ -0.38
SEMA4B-214ENST00000560003 ILDR2Q71H61 639 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms