RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 SHPRHQ149N8 1683 aa11.89□□□□□ -0.51
SNX1-207ENST00000559401 NUTM2FA1L443 756 aa11.88□□□□□ -0.51
SNX1-207ENST00000559401 SAFB2Q14151 953 aaKnown RBP eCLIP11.88□□□□□ -0.51
SNX1-207ENST00000559401 FMN2Q9NZ56 1722 aa11.88□□□□□ -0.51
SNX1-207ENST00000559401 TRIM26Q12899 539 aaPredicted RBP11.87□□□□□ -0.51
SNX1-207ENST00000559401 DDX17Q92841 729 aaKnown RBP11.87□□□□□ -0.51
SNX1-207ENST00000559401 STAC3Q96MF2 364 aa11.87□□□□□ -0.51
SNX1-207ENST00000559401 POGKQ9P215 609 aa11.87□□□□□ -0.51
SNX1-207ENST00000559401 ADGRB1O14514 1584 aa11.87□□□□□ -0.51
SNX1-207ENST00000559401 MEX3CQ5U5Q3 659 aaKnown RBP11.86□□□□□ -0.51
SNX1-207ENST00000559401 PRAM1Q96QH2 718 aa11.86□□□□□ -0.51
SNX1-207ENST00000559401 ORAI2Q96SN7 254 aa11.86□□□□□ -0.51
SNX1-207ENST00000559401 TRAK1Q9UPV9 953 aa11.86□□□□□ -0.51
SNX1-207ENST00000559401 DLC1Q96QB1 1528 aa11.86□□□□□ -0.51
SNX1-207ENST00000559401 NEUROD1Q13562 356 aa11.85□□□□□ -0.51
SNX1-207ENST00000559401 ESCO1Q5FWF5 840 aa11.85□□□□□ -0.51
SNX1-207ENST00000559401 ARHGEF28Q8N1W1 1705 aaKnown RBP11.84□□□□□ -0.51
SNX1-207ENST00000559401 KIAA1210Q9ULL0 1709 aa11.84□□□□□ -0.51
SNX1-207ENST00000559401 NUTM2BA6NNL0 878 aaPredicted RBP11.84□□□□□ -0.51
SNX1-207ENST00000559401 NUTM2EB1AL46 878 aaPredicted RBP11.84□□□□□ -0.51
SNX1-207ENST00000559401 NUTM2AQ8IVF1 878 aaPredicted RBP11.84□□□□□ -0.51
SNX1-207ENST00000559401 RGPD8O14715 1765 aaPredicted RBP11.84□□□□□ -0.51
SNX1-207ENST00000559401 SPATA31A6Q5VVP1 1343 aa11.84□□□□□ -0.51
SNX1-207ENST00000559401 LRRC59Q96AG4 307 aaKnown RBP11.83□□□□□ -0.52
SNX1-207ENST00000559401 SIRT1Q96EB6 747 aa11.83□□□□□ -0.52
SNX1-207ENST00000559401 SIN3AQ96ST3 1273 aa11.83□□□□□ -0.52
SNX1-207ENST00000559401 KIF1AQ12756 1690 aa11.83□□□□□ -0.52
SNX1-207ENST00000559401 LRP6O75581 1613 aa11.82□□□□□ -0.52
SNX1-207ENST00000559401 MINK1Q8N4C8 1332 aaPredicted RBP11.82□□□□□ -0.52
SNX1-207ENST00000559401 ADGRB2O60241 1585 aa11.81□□□□□ -0.52
SNX1-207ENST00000559401 HIRIP3Q9BW71 556 aaPredicted RBP11.81□□□□□ -0.52
SNX1-207ENST00000559401 NPHP3Q7Z494 1330 aa11.81□□□□□ -0.52
SNX1-207ENST00000559401 PNPLA6Q8IY17 1366 aa11.8□□□□□ -0.52
SNX1-207ENST00000559401 FOXO3O43524 673 aa11.8□□□□□ -0.52
SNX1-207ENST00000559401 XPCQ01831 940 aaPredicted RBP11.8□□□□□ -0.52
SNX1-207ENST00000559401 L3MBTL2Q969R5 705 aa11.79□□□□□ -0.52
SNX1-207ENST00000559401 SOS2Q07890 1332 aaPredicted RBP11.79□□□□□ -0.52
SNX1-207ENST00000559401 USP32Q8NFA0 1604 aa11.78□□□□□ -0.52
SNX1-207ENST00000559401 PXDNQ92626 1479 aa11.78□□□□□ -0.52
SNX1-207ENST00000559401 SOCS7O14512 581 aa11.78□□□□□ -0.52
SNX1-207ENST00000559401 RGS17Q9UGC6 210 aaPredicted RBP11.78□□□□□ -0.52
SNX1-207ENST00000559401 NBPF1Q3BBV0 1214 aa11.77□□□□□ -0.53
SNX1-207ENST00000559401 PHF8Q9UPP1 1060 aa11.77□□□□□ -0.53
SNX1-207ENST00000559401 TRPM1Q7Z4N2 1603 aa11.77□□□□□ -0.53
SNX1-207ENST00000559401 EIF3AQ14152 1382 aaKnown RBP11.77□□□□□ -0.53
SNX1-207ENST00000559401 ITSN1Q15811 1721 aa11.77□□□□□ -0.53
SNX1-207ENST00000559401 ANKARQ7Z5J8 1434 aa11.77□□□□□ -0.53
SNX1-207ENST00000559401 TULP4Q9NRJ4 1543 aa11.76□□□□□ -0.53
SNX1-207ENST00000559401 COL22A1Q8NFW1 1626 aaPredicted RBP11.76□□□□□ -0.53
SNX1-207ENST00000559401 TONSLQ96HA7 1378 aa11.76□□□□□ -0.53
SNX1-207ENST00000559401 QRICH2Q9H0J4 1663 aa11.75□□□□□ -0.53
SNX1-207ENST00000559401 ADAMTS2O95450 1211 aa11.75□□□□□ -0.53
SNX1-207ENST00000559401 POTEAQ6S8J7 498 aa11.75□□□□□ -0.53
SNX1-207ENST00000559401 PMFBP1Q8TBY8 1022 aa11.75□□□□□ -0.53
SNX1-207ENST00000559401 C8orf37Q96NL8 207 aa11.75□□□□□ -0.53
SNX1-207ENST00000559401 WASLO00401 505 aaPredicted RBP11.74□□□□□ -0.53
SNX1-207ENST00000559401 PLEKHG5O94827 1062 aa11.74□□□□□ -0.53
SNX1-207ENST00000559401 KRT28Q7Z3Y7 464 aa11.74□□□□□ -0.53
SNX1-207ENST00000559401 ROCK2O75116 1388 aaKnown RBP11.73□□□□□ -0.53
SNX1-207ENST00000559401 AFF2P51816 1311 aa11.73□□□□□ -0.53
SNX1-207ENST00000559401 PSME1Q06323 249 aa11.73□□□□□ -0.53
SNX1-207ENST00000559401 ZNF772Q68DY9 489 aaPredicted RBP11.73□□□□□ -0.53
SNX1-207ENST00000559401 LMOD2Q6P5Q4 547 aa11.73□□□□□ -0.53
SNX1-207ENST00000559401 MARF1Q9Y4F3 1742 aaKnown RBP11.73□□□□□ -0.53
SNX1-207ENST00000559401 TNS3Q68CZ2 1445 aa11.72□□□□□ -0.53
SNX1-207ENST00000559401 PRR36Q9H6K5 1346 aa11.72□□□□□ -0.53
SNX1-207ENST00000559401 CENPJQ9HC77 1338 aaPredicted RBP11.72□□□□□ -0.53
SNX1-207ENST00000559401 HAP1P54257 671 aaPredicted RBP11.72□□□□□ -0.53
SNX1-207ENST00000559401 NGLY1Q96IV0 654 aa11.72□□□□□ -0.53
SNX1-207ENST00000559401 ATP7BP35670 1465 aa11.71□□□□□ -0.53
SNX1-207ENST00000559401 GPRASP1Q5JY77 1395 aa11.71□□□□□ -0.53
SNX1-207ENST00000559401 SPATA31A3Q5VYP0 1347 aa11.71□□□□□ -0.53
SNX1-207ENST00000559401 NGDNQ8NEJ9 315 aaKnown RBP11.71□□□□□ -0.53
SNX1-207ENST00000559401 TOPAZ1Q8N9V7 1692 aa11.71□□□□□ -0.54
SNX1-207ENST00000559401 CDK19Q9BWU1 502 aa11.7□□□□□ -0.54
SNX1-207ENST00000559401 TRPM3Q9HCF6 1732 aaPredicted RBP11.69□□□□□ -0.54
SNX1-207ENST00000559401 SRPK2P78362 688 aaKnown RBP11.69□□□□□ -0.54
SNX1-207ENST00000559401 NUDT16Q96DE0 195 aaKnown RBP11.69□□□□□ -0.54
SNX1-207ENST00000559401 PCGF6Q9BYE7 350 aa11.69□□□□□ -0.54
SNX1-207ENST00000559401 ABCA3Q99758 1704 aa11.69□□□□□ -0.54
SNX1-207ENST00000559401 SBNO1A3KN83 1393 aa11.68□□□□□ -0.54
SNX1-207ENST00000559401 ARHGEF10O15013 1369 aa11.68□□□□□ -0.54
SNX1-207ENST00000559401 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
SNX1-207ENST00000559401 NBPF8Q3BBV2 869 aa11.68□□□□□ -0.54
SNX1-207ENST00000559401 USP21Q9UK80 565 aa11.67□□□□□ -0.54
SNX1-207ENST00000559401 ALS2Q96Q42 1657 aa11.67□□□□□ -0.54
SNX1-207ENST00000559401 RALGAPBQ86X10 1494 aa11.66□□□□□ -0.54
SNX1-207ENST00000559401 RXRBP28702 533 aa11.66□□□□□ -0.54
SNX1-207ENST00000559401 CABLES1Q8TDN4 633 aa11.66□□□□□ -0.54
SNX1-207ENST00000559401 CARD11Q9BXL7 1154 aa11.66□□□□□ -0.54
SNX1-207ENST00000559401 CABP2Q9NPB3 220 aa11.66□□□□□ -0.54
SNX1-207ENST00000559401 QTRT2Q9H974 415 aaKnown RBP11.65□□□□□ -0.54
SNX1-207ENST00000559401 CCDC61Q9Y6R9 512 aa11.65□□□□□ -0.54
SNX1-207ENST00000559401 PPIP5K1Q6PFW1 1433 aa11.65□□□□□ -0.54
SNX1-207ENST00000559401 PLCH1Q4KWH8 1693 aa11.65□□□□□ -0.55
SNX1-207ENST00000559401 EVC2Q86UK5 1308 aa11.64□□□□□ -0.55
SNX1-207ENST00000559401 ACEP12821 1306 aa11.63□□□□□ -0.55
SNX1-207ENST00000559401 TRPC5Q9UL62 973 aaPredicted RBP11.63□□□□□ -0.55
SNX1-207ENST00000559401 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.63□□□□□ -0.55
SNX1-207ENST00000559401 RBM6P78332 1123 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms