RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 EP400Q96L91 3159 aa24.94■■□□□ 1.58
PSEN1-224ENST00000559361 ATRNO75882 1429 aa24.93■■□□□ 1.58
PSEN1-224ENST00000559361 COL22A1Q8NFW1 1626 aaPredicted RBP24.93■■□□□ 1.58
PSEN1-224ENST00000559361 VGFO15240 615 aaPredicted RBP24.91■■□□□ 1.58
PSEN1-224ENST00000559361 HRCP23327 699 aa24.88■■□□□ 1.57
PSEN1-224ENST00000559361 MYOM2P54296 1465 aa24.88■■□□□ 1.57
PSEN1-224ENST00000559361 RPGRIP1LQ68CZ1 1315 aa24.86■■□□□ 1.57
PSEN1-224ENST00000559361 BCL9LQ86UU0 1499 aa24.85■■□□□ 1.57
PSEN1-224ENST00000559361 CCDC125Q86Z20 511 aa24.83■■□□□ 1.57
PSEN1-224ENST00000559361 MARF1Q9Y4F3 1742 aaKnown RBP24.83■■□□□ 1.57
PSEN1-224ENST00000559361 NPHP3Q7Z494 1330 aa24.83■■□□□ 1.56
PSEN1-224ENST00000559361 PXDNQ92626 1479 aa24.83■■□□□ 1.56
PSEN1-224ENST00000559361 FOXD1Q16676 465 aa24.82■■□□□ 1.56
PSEN1-224ENST00000559361 PCGF6Q9BYE7 350 aa24.82■■□□□ 1.56
PSEN1-224ENST00000559361 ZRANB1Q9UGI0 708 aa24.82■■□□□ 1.56
PSEN1-224ENST00000559361 RAB3GAP2Q9H2M9 1393 aa24.81■■□□□ 1.56
PSEN1-224ENST00000559361 CDC42BPGQ6DT37 1551 aa24.8■■□□□ 1.56
PSEN1-224ENST00000559361 PPLO60437 1756 aa24.8■■□□□ 1.56
PSEN1-224ENST00000559361 ESCO1Q5FWF5 840 aa24.79■■□□□ 1.56
PSEN1-224ENST00000559361 GJD4Q96KN9 370 aaPredicted RBP24.78■■□□□ 1.56
PSEN1-224ENST00000559361 FOXO3O43524 673 aa24.76■■□□□ 1.55
PSEN1-224ENST00000559361 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.75■■□□□ 1.55
PSEN1-224ENST00000559361 TECPR2O15040 1411 aa24.72■■□□□ 1.55
PSEN1-224ENST00000559361 LRPPRCP42704 1394 aaKnown RBP24.72■■□□□ 1.55
PSEN1-224ENST00000559361 XPCQ01831 940 aaPredicted RBP24.71■■□□□ 1.55
PSEN1-224ENST00000559361 SLIT2O94813 1529 aa24.71■■□□□ 1.55
PSEN1-224ENST00000559361 UNC5CLQ8IV45 518 aa24.7■■□□□ 1.54
PSEN1-224ENST00000559361 GLI3P10071 1580 aa24.69■■□□□ 1.54
PSEN1-224ENST00000559361 WAPLQ7Z5K2 1190 aa24.68■■□□□ 1.54
PSEN1-224ENST00000559361 RALGAPBQ86X10 1494 aa24.68■■□□□ 1.54
PSEN1-224ENST00000559361 ADGRF5Q8IZF2 1346 aa24.67■■□□□ 1.54
PSEN1-224ENST00000559361 SLC4A1APQ9BWU0 796 aaKnown RBP24.67■■□□□ 1.54
PSEN1-224ENST00000559361 ABCC11Q96J66 1382 aa24.67■■□□□ 1.54
PSEN1-224ENST00000559361 SPATA31A3Q5VYP0 1347 aa24.66■■□□□ 1.54
PSEN1-224ENST00000559361 BLMP54132 1417 aaPredicted RBP24.66■■□□□ 1.54
PSEN1-224ENST00000559361 BRWD3Q6RI45 1802 aa24.65■■□□□ 1.54
PSEN1-224ENST00000559361 NUTM2FA1L443 756 aa24.64■■□□□ 1.54
PSEN1-224ENST00000559361 KNDC1Q76NI1 1749 aa24.63■■□□□ 1.53
PSEN1-224ENST00000559361 FMN2Q9NZ56 1722 aa24.63■■□□□ 1.53
PSEN1-224ENST00000559361 STK26Q9P289 416 aa24.62■■□□□ 1.53
PSEN1-224ENST00000559361 PLEKHH1Q9ULM0 1364 aa24.62■■□□□ 1.53
PSEN1-224ENST00000559361 KIF1AQ12756 1690 aa24.61■■□□□ 1.53
PSEN1-224ENST00000559361 USP32Q8NFA0 1604 aa24.61■■□□□ 1.53
PSEN1-224ENST00000559361 SPATA31E1Q6ZUB1 1445 aa24.61■■□□□ 1.53
PSEN1-224ENST00000559361 IFT172Q9UG01 1749 aa24.6■■□□□ 1.53
PSEN1-224ENST00000559361 CCDC144AA2RUR9 1427 aa24.6■■□□□ 1.53
PSEN1-224ENST00000559361 ANKRD30BQ9BXX2 1392 aa24.59■■□□□ 1.53
PSEN1-224ENST00000559361 ONECUT3O60422 494 aaPredicted RBP24.59■■□□□ 1.53
PSEN1-224ENST00000559361 KRT28Q7Z3Y7 464 aa24.59■■□□□ 1.53
PSEN1-224ENST00000559361 TMEM132EQ6IEE7 984 aa24.58■■□□□ 1.53
PSEN1-224ENST00000559361 DEFB132Q7Z7B7 95 aa24.58■■□□□ 1.53
PSEN1-224ENST00000559361 MPHOSPH9Q99550 1183 aa24.58■■□□□ 1.53
PSEN1-224ENST00000559361 VPS72Q15906 364 aa24.57■■□□□ 1.52
PSEN1-224ENST00000559361 SIRT1Q96EB6 747 aa24.57■■□□□ 1.52
PSEN1-224ENST00000559361 SEPT12Q8IYM1 358 aa24.56■■□□□ 1.52
PSEN1-224ENST00000559361 RGPD8O14715 1765 aaPredicted RBP24.55■■□□□ 1.52
PSEN1-224ENST00000559361 PIK3C2GO75747 1445 aa24.55■■□□□ 1.52
PSEN1-224ENST00000559361 RGL3Q3MIN7 710 aa24.55■■□□□ 1.52
PSEN1-224ENST00000559361 NWD2Q9ULI1 1742 aa24.55■■□□□ 1.52
PSEN1-224ENST00000559361 YTHDC2Q9H6S0 1430 aaKnown RBP24.54■■□□□ 1.52
PSEN1-224ENST00000559361 TNS3Q68CZ2 1445 aa24.53■■□□□ 1.52
PSEN1-224ENST00000559361 PHF8Q9UPP1 1060 aa24.51■■□□□ 1.51
PSEN1-224ENST00000559361 LRP5O75197 1615 aa24.5■■□□□ 1.51
PSEN1-224ENST00000559361 PLCH1Q4KWH8 1693 aa24.5■■□□□ 1.51
PSEN1-224ENST00000559361 PSME1Q06323 249 aa24.5■■□□□ 1.51
PSEN1-224ENST00000559361 SF3B2Q13435 895 aaKnown RBP24.5■■□□□ 1.51
PSEN1-224ENST00000559361 CABLES1Q8TDN4 633 aa24.5■■□□□ 1.51
PSEN1-224ENST00000559361 SBNO1A3KN83 1393 aa24.5■■□□□ 1.51
PSEN1-224ENST00000559361 KRT27Q7Z3Y8 459 aa24.48■■□□□ 1.51
PSEN1-224ENST00000559361 ABCA3Q99758 1704 aa24.48■■□□□ 1.51
PSEN1-224ENST00000559361 NRXN1Q9ULB1 1477 aa24.48■■□□□ 1.51
PSEN1-224ENST00000559361 C14orf93Q9H972 538 aaKnown RBP24.47■■□□□ 1.51
PSEN1-224ENST00000559361 DHX57Q6P158 1386 aaKnown RBP24.46■■□□□ 1.51
PSEN1-224ENST00000559361 HAP1P54257 671 aaPredicted RBP24.46■■□□□ 1.51
PSEN1-224ENST00000559361 FAM83GA6ND36 823 aa24.45■■□□□ 1.5
PSEN1-224ENST00000559361 ARHGEF10O15013 1369 aa24.44■■□□□ 1.5
PSEN1-224ENST00000559361 CCDC9Q9Y3X0 531 aaKnown RBP24.42■■□□□ 1.5
PSEN1-224ENST00000559361 NRAPQ86VF7 1730 aa24.41■■□□□ 1.5
PSEN1-224ENST00000559361 CLSPNQ9HAW4 1339 aa24.39■■□□□ 1.5
PSEN1-224ENST00000559361 CFAP70Q5T0N1 1121 aa24.39■■□□□ 1.49
PSEN1-224ENST00000559361 ANKARQ7Z5J8 1434 aa24.38■■□□□ 1.49
PSEN1-224ENST00000559361 BAG6P46379 1132 aa24.38■■□□□ 1.49
PSEN1-224ENST00000559361 LMOD2Q6P5Q4 547 aa24.38■■□□□ 1.49
PSEN1-224ENST00000559361 PRAM1Q96QH2 718 aa24.37■■□□□ 1.49
PSEN1-224ENST00000559361 TRPM3Q9HCF6 1732 aaPredicted RBP24.36■■□□□ 1.49
PSEN1-224ENST00000559361 PLEKHG5O94827 1062 aa24.36■■□□□ 1.49
PSEN1-224ENST00000559361 DLC1Q96QB1 1528 aa24.35■■□□□ 1.49
PSEN1-224ENST00000559361 PSDA5PKW4 1024 aaPredicted RBP24.35■■□□□ 1.49
PSEN1-224ENST00000559361 FAM98CQ17RN3 349 aaKnown RBP24.35■■□□□ 1.49
PSEN1-224ENST00000559361 PMFBP1Q8TBY8 1022 aa24.35■■□□□ 1.49
PSEN1-224ENST00000559361 BTG4Q9NY30 223 aa24.34■■□□□ 1.49
PSEN1-224ENST00000559361 ALS2Q96Q42 1657 aa24.34■■□□□ 1.49
PSEN1-224ENST00000559361 SAFB2Q14151 953 aaKnown RBP eCLIP24.33■■□□□ 1.49
PSEN1-224ENST00000559361 COL14A1Q05707 1796 aaKnown RBP24.33■■□□□ 1.49
PSEN1-224ENST00000559361 ADGRB2O60241 1585 aa24.33■■□□□ 1.48
PSEN1-224ENST00000559361 RGPD1P0DJD0 1748 aa24.31■■□□□ 1.48
PSEN1-224ENST00000559361 SPATA31A5Q5VU36 1347 aa24.31■■□□□ 1.48
PSEN1-224ENST00000559361 SPATA31A7Q8IWB4 1347 aa24.31■■□□□ 1.48
PSEN1-224ENST00000559361 DISP2A7MBM2 1401 aa24.3■■□□□ 1.48
PSEN1-224ENST00000559361 A0A0G2JS52 829 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms