RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 DDX17Q92841 729 aaKnown RBP22.27■■□□□ 1.16
RPL28-207ENST00000558815 NUTM2FA1L443 756 aa22.25■■□□□ 1.15
RPL28-207ENST00000558815 SAFB2Q14151 953 aaKnown RBP eCLIP22.24■■□□□ 1.15
RPL28-207ENST00000558815 ORAI2Q96SN7 254 aa22.24■■□□□ 1.15
RPL28-207ENST00000558815 SHPRHQ149N8 1683 aa22.23■■□□□ 1.15
RPL28-207ENST00000558815 ADGRB1O14514 1584 aa22.23■■□□□ 1.15
RPL28-207ENST00000558815 FMN2Q9NZ56 1722 aa22.21■■□□□ 1.15
RPL28-207ENST00000558815 PRAM1Q96QH2 718 aa22.21■■□□□ 1.15
RPL28-207ENST00000558815 TRAK1Q9UPV9 953 aa22.21■■□□□ 1.15
RPL28-207ENST00000558815 TRIM26Q12899 539 aaPredicted RBP22.2■■□□□ 1.14
RPL28-207ENST00000558815 POGKQ9P215 609 aa22.2■■□□□ 1.14
RPL28-207ENST00000558815 ESCO1Q5FWF5 840 aa22.19■■□□□ 1.14
RPL28-207ENST00000558815 STAC3Q96MF2 364 aa22.19■■□□□ 1.14
RPL28-207ENST00000558815 DLC1Q96QB1 1528 aa22.18■■□□□ 1.14
RPL28-207ENST00000558815 SIRT1Q96EB6 747 aa22.18■■□□□ 1.14
RPL28-207ENST00000558815 LRP6O75581 1613 aa22.17■■□□□ 1.14
RPL28-207ENST00000558815 NUTM2BA6NNL0 878 aaPredicted RBP22.17■■□□□ 1.14
RPL28-207ENST00000558815 NUTM2EB1AL46 878 aaPredicted RBP22.17■■□□□ 1.14
RPL28-207ENST00000558815 MEX3CQ5U5Q3 659 aaKnown RBP22.17■■□□□ 1.14
RPL28-207ENST00000558815 NUTM2AQ8IVF1 878 aaPredicted RBP22.17■■□□□ 1.14
RPL28-207ENST00000558815 SIN3AQ96ST3 1273 aa22.17■■□□□ 1.14
RPL28-207ENST00000558815 SPATA31A6Q5VVP1 1343 aa22.16■■□□□ 1.14
RPL28-207ENST00000558815 NEUROD1Q13562 356 aa22.16■■□□□ 1.14
RPL28-207ENST00000558815 LRRC59Q96AG4 307 aaKnown RBP22.16■■□□□ 1.14
RPL28-207ENST00000558815 RGPD8O14715 1765 aaPredicted RBP22.15■■□□□ 1.14
RPL28-207ENST00000558815 RGS17Q9UGC6 210 aaPredicted RBP22.14■■□□□ 1.13
RPL28-207ENST00000558815 ARHGEF28Q8N1W1 1705 aaKnown RBP22.13■■□□□ 1.13
RPL28-207ENST00000558815 KIAA1210Q9ULL0 1709 aa22.12■■□□□ 1.13
RPL28-207ENST00000558815 HIRIP3Q9BW71 556 aaPredicted RBP22.12■■□□□ 1.13
RPL28-207ENST00000558815 PNPLA6Q8IY17 1366 aa22.12■■□□□ 1.13
RPL28-207ENST00000558815 MINK1Q8N4C8 1332 aaPredicted RBP22.11■■□□□ 1.13
RPL28-207ENST00000558815 XPCQ01831 940 aaPredicted RBP22.11■■□□□ 1.13
RPL28-207ENST00000558815 SOS2Q07890 1332 aaPredicted RBP22.1■■□□□ 1.13
RPL28-207ENST00000558815 SOCS7O14512 581 aa22.1■■□□□ 1.13
RPL28-207ENST00000558815 FOXO3O43524 673 aa22.1■■□□□ 1.13
RPL28-207ENST00000558815 KIF1AQ12756 1690 aa22.1■■□□□ 1.13
RPL28-207ENST00000558815 NPHP3Q7Z494 1330 aa22.09■■□□□ 1.13
RPL28-207ENST00000558815 L3MBTL2Q969R5 705 aa22.09■■□□□ 1.13
RPL28-207ENST00000558815 ADGRB2O60241 1585 aa22.08■■□□□ 1.13
RPL28-207ENST00000558815 NBPF1Q3BBV0 1214 aa22.06■■□□□ 1.12
RPL28-207ENST00000558815 POTEAQ6S8J7 498 aa22.06■■□□□ 1.12
RPL28-207ENST00000558815 PXDNQ92626 1479 aa22.06■■□□□ 1.12
RPL28-207ENST00000558815 USP32Q8NFA0 1604 aa22.06■■□□□ 1.12
RPL28-207ENST00000558815 PHF8Q9UPP1 1060 aa22.04■■□□□ 1.12
RPL28-207ENST00000558815 ADAMTS2O95450 1211 aa22.02■■□□□ 1.12
RPL28-207ENST00000558815 PMFBP1Q8TBY8 1022 aa22.01■■□□□ 1.11
RPL28-207ENST00000558815 ANKARQ7Z5J8 1434 aa22■■□□□ 1.11
RPL28-207ENST00000558815 TRPM1Q7Z4N2 1603 aa22■■□□□ 1.11
RPL28-207ENST00000558815 COL22A1Q8NFW1 1626 aaPredicted RBP22■■□□□ 1.11
RPL28-207ENST00000558815 WASLO00401 505 aaPredicted RBP22■■□□□ 1.11
RPL28-207ENST00000558815 KRT28Q7Z3Y7 464 aa22■■□□□ 1.11
RPL28-207ENST00000558815 C8orf37Q96NL8 207 aa22■■□□□ 1.11
RPL28-207ENST00000558815 TULP4Q9NRJ4 1543 aa22■■□□□ 1.11
RPL28-207ENST00000558815 EIF3AQ14152 1382 aaKnown RBP21.99■■□□□ 1.11
RPL28-207ENST00000558815 AFF2P51816 1311 aa21.98■■□□□ 1.11
RPL28-207ENST00000558815 PRR36Q9H6K5 1346 aa21.98■■□□□ 1.11
RPL28-207ENST00000558815 PLEKHG5O94827 1062 aa21.97■■□□□ 1.11
RPL28-207ENST00000558815 ZNF772Q68DY9 489 aaPredicted RBP21.97■■□□□ 1.11
RPL28-207ENST00000558815 ITSN1Q15811 1721 aa21.96■■□□□ 1.11
RPL28-207ENST00000558815 PSME1Q06323 249 aa21.95■■□□□ 1.1
RPL28-207ENST00000558815 TONSLQ96HA7 1378 aa21.95■■□□□ 1.1
RPL28-207ENST00000558815 QRICH2Q9H0J4 1663 aa21.95■■□□□ 1.1
RPL28-207ENST00000558815 LMOD2Q6P5Q4 547 aa21.94■■□□□ 1.1
RPL28-207ENST00000558815 NGLY1Q96IV0 654 aa21.94■■□□□ 1.1
RPL28-207ENST00000558815 SPATA31A3Q5VYP0 1347 aa21.94■■□□□ 1.1
RPL28-207ENST00000558815 CENPJQ9HC77 1338 aaPredicted RBP21.93■■□□□ 1.1
RPL28-207ENST00000558815 MARF1Q9Y4F3 1742 aaKnown RBP21.92■■□□□ 1.1
RPL28-207ENST00000558815 TNS3Q68CZ2 1445 aa21.92■■□□□ 1.1
RPL28-207ENST00000558815 ROCK2O75116 1388 aaKnown RBP21.92■■□□□ 1.1
RPL28-207ENST00000558815 CDK19Q9BWU1 502 aa21.92■■□□□ 1.1
RPL28-207ENST00000558815 ATP7BP35670 1465 aa21.91■■□□□ 1.1
RPL28-207ENST00000558815 NBPF8Q3BBV2 869 aa21.9■■□□□ 1.1
RPL28-207ENST00000558815 NGDNQ8NEJ9 315 aaKnown RBP21.9■■□□□ 1.1
RPL28-207ENST00000558815 NUDT16Q96DE0 195 aaKnown RBP21.9■■□□□ 1.1
RPL28-207ENST00000558815 HAP1P54257 671 aaPredicted RBP21.89■■□□□ 1.09
RPL28-207ENST00000558815 TRPM3Q9HCF6 1732 aaPredicted RBP21.89■■□□□ 1.09
RPL28-207ENST00000558815 SBNO1A3KN83 1393 aa21.88■■□□□ 1.09
RPL28-207ENST00000558815 GPRASP1Q5JY77 1395 aa21.88■■□□□ 1.09
RPL28-207ENST00000558815 TOPAZ1Q8N9V7 1692 aa21.87■■□□□ 1.09
RPL28-207ENST00000558815 SRPK2P78362 688 aaKnown RBP21.86■■□□□ 1.09
RPL28-207ENST00000558815 CABLES1Q8TDN4 633 aa21.86■■□□□ 1.09
RPL28-207ENST00000558815 PCGF6Q9BYE7 350 aa21.86■■□□□ 1.09
RPL28-207ENST00000558815 ABCA3Q99758 1704 aa21.86■■□□□ 1.09
RPL28-207ENST00000558815 RXRBP28702 533 aa21.85■■□□□ 1.09
RPL28-207ENST00000558815 USP21Q9UK80 565 aa21.85■■□□□ 1.09
RPL28-207ENST00000558815 PAK3O75914 559 aaPredicted RBP21.84■■□□□ 1.09
RPL28-207ENST00000558815 QTRT2Q9H974 415 aaKnown RBP21.84■■□□□ 1.09
RPL28-207ENST00000558815 ARHGEF10O15013 1369 aa21.84■■□□□ 1.09
RPL28-207ENST00000558815 ALS2Q96Q42 1657 aa21.83■■□□□ 1.09
RPL28-207ENST00000558815 CABP2Q9NPB3 220 aa21.83■■□□□ 1.09
RPL28-207ENST00000558815 CCDC61Q9Y6R9 512 aa21.82■■□□□ 1.08
RPL28-207ENST00000558815 CARD11Q9BXL7 1154 aa21.8■■□□□ 1.08
RPL28-207ENST00000558815 PPIP5K1Q6PFW1 1433 aa21.8■■□□□ 1.08
RPL28-207ENST00000558815 RALGAPBQ86X10 1494 aa21.79■■□□□ 1.08
RPL28-207ENST00000558815 FNBP4Q8N3X1 1017 aaPredicted RBP21.79■■□□□ 1.08
RPL28-207ENST00000558815 ACEP12821 1306 aa21.79■■□□□ 1.08
RPL28-207ENST00000558815 RBM6P78332 1123 aaKnown RBP21.78■■□□□ 1.08
RPL28-207ENST00000558815 TRPC5Q9UL62 973 aaPredicted RBP21.77■■□□□ 1.08
RPL28-207ENST00000558815 EVC2Q86UK5 1308 aa21.77■■□□□ 1.07
RPL28-207ENST00000558815 PLCH1Q4KWH8 1693 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms