RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 PLEKHH1Q9ULM0 1364 aa14.92□□□□□ -0.02
TPM1-212ENST00000558347 CFAP70Q5T0N1 1121 aa14.92□□□□□ -0.02
TPM1-212ENST00000558347 WAPLQ7Z5K2 1190 aa14.92□□□□□ -0.02
TPM1-212ENST00000558347 DDX17Q92841 729 aaKnown RBP14.92□□□□□ -0.02
TPM1-212ENST00000558347 LRP6O75581 1613 aa14.91□□□□□ -0.02
TPM1-212ENST00000558347 CDC42BPGQ6DT37 1551 aa14.91□□□□□ -0.02
TPM1-212ENST00000558347 DHX57Q6P158 1386 aaKnown RBP14.9□□□□□ -0.02
TPM1-212ENST00000558347 ORAI2Q96SN7 254 aa14.89□□□□□ -0.03
TPM1-212ENST00000558347 SPATA31A6Q5VVP1 1343 aa14.88□□□□□ -0.03
TPM1-212ENST00000558347 KDM2AQ9Y2K7 1162 aa14.87□□□□□ -0.03
TPM1-212ENST00000558347 ADGRB1O14514 1584 aa14.87□□□□□ -0.03
TPM1-212ENST00000558347 CLSPNQ9HAW4 1339 aa14.87□□□□□ -0.03
TPM1-212ENST00000558347 DCAF11Q8TEB1 546 aa14.87□□□□□ -0.03
TPM1-212ENST00000558347 POTEAQ6S8J7 498 aa14.86□□□□□ -0.03
TPM1-212ENST00000558347 LRRC59Q96AG4 307 aaKnown RBP14.85□□□□□ -0.03
TPM1-212ENST00000558347 SIRT1Q96EB6 747 aa14.85□□□□□ -0.03
TPM1-212ENST00000558347 FMN2Q9NZ56 1722 aa14.84□□□□□ -0.03
TPM1-212ENST00000558347 NUTM2FA1L443 756 aa14.84□□□□□ -0.03
TPM1-212ENST00000558347 PNPLA6Q8IY17 1366 aa14.84□□□□□ -0.03
TPM1-212ENST00000558347 DLC1Q96QB1 1528 aa14.83□□□□□ -0.03
TPM1-212ENST00000558347 SOS2Q07890 1332 aaPredicted RBP14.83□□□□□ -0.04
TPM1-212ENST00000558347 NUTM2BA6NNL0 878 aaPredicted RBP14.82□□□□□ -0.04
TPM1-212ENST00000558347 NUTM2EB1AL46 878 aaPredicted RBP14.82□□□□□ -0.04
TPM1-212ENST00000558347 ESCO1Q5FWF5 840 aa14.82□□□□□ -0.04
TPM1-212ENST00000558347 NUTM2AQ8IVF1 878 aaPredicted RBP14.82□□□□□ -0.04
TPM1-212ENST00000558347 SAFB2Q14151 953 aaKnown RBP eCLIP14.82□□□□□ -0.04
TPM1-212ENST00000558347 MEX3CQ5U5Q3 659 aaKnown RBP14.82□□□□□ -0.04
TPM1-212ENST00000558347 PRAM1Q96QH2 718 aa14.82□□□□□ -0.04
TPM1-212ENST00000558347 STAC3Q96MF2 364 aa14.81□□□□□ -0.04
TPM1-212ENST00000558347 PXDNQ92626 1479 aa14.8□□□□□ -0.04
TPM1-212ENST00000558347 TRAK1Q9UPV9 953 aa14.8□□□□□ -0.04
TPM1-212ENST00000558347 RGPD8O14715 1765 aaPredicted RBP14.8□□□□□ -0.04
TPM1-212ENST00000558347 NPHP3Q7Z494 1330 aa14.79□□□□□ -0.04
TPM1-212ENST00000558347 FOXO3O43524 673 aa14.78□□□□□ -0.04
TPM1-212ENST00000558347 POGKQ9P215 609 aa14.78□□□□□ -0.04
TPM1-212ENST00000558347 ADGRB2O60241 1585 aa14.77□□□□□ -0.04
TPM1-212ENST00000558347 XPCQ01831 940 aaPredicted RBP14.77□□□□□ -0.04
TPM1-212ENST00000558347 KIF1AQ12756 1690 aa14.77□□□□□ -0.04
TPM1-212ENST00000558347 COL22A1Q8NFW1 1626 aaPredicted RBP14.77□□□□□ -0.05
TPM1-212ENST00000558347 ARHGEF28Q8N1W1 1705 aaKnown RBP14.76□□□□□ -0.05
TPM1-212ENST00000558347 USP32Q8NFA0 1604 aa14.76□□□□□ -0.05
TPM1-212ENST00000558347 KIAA1210Q9ULL0 1709 aa14.75□□□□□ -0.05
TPM1-212ENST00000558347 HIRIP3Q9BW71 556 aaPredicted RBP14.75□□□□□ -0.05
TPM1-212ENST00000558347 ZNF772Q68DY9 489 aaPredicted RBP14.74□□□□□ -0.05
TPM1-212ENST00000558347 C8orf37Q96NL8 207 aa14.74□□□□□ -0.05
TPM1-212ENST00000558347 AFF2P51816 1311 aa14.74□□□□□ -0.05
TPM1-212ENST00000558347 SIN3AQ96ST3 1273 aa14.73□□□□□ -0.05
TPM1-212ENST00000558347 MINK1Q8N4C8 1332 aaPredicted RBP14.73□□□□□ -0.05
TPM1-212ENST00000558347 ADAMTS2O95450 1211 aa14.72□□□□□ -0.05
TPM1-212ENST00000558347 PHF8Q9UPP1 1060 aa14.72□□□□□ -0.05
TPM1-212ENST00000558347 NBPF1Q3BBV0 1214 aa14.71□□□□□ -0.05
TPM1-212ENST00000558347 DIEXFQ68CQ4 756 aaKnown RBP14.71□□□□□ -0.05
TPM1-212ENST00000558347 ANKARQ7Z5J8 1434 aa14.71□□□□□ -0.05
TPM1-212ENST00000558347 KRT28Q7Z3Y7 464 aa14.71□□□□□ -0.06
TPM1-212ENST00000558347 TULP4Q9NRJ4 1543 aa14.7□□□□□ -0.06
TPM1-212ENST00000558347 SPATA31A3Q5VYP0 1347 aa14.7□□□□□ -0.06
TPM1-212ENST00000558347 PRR36Q9H6K5 1346 aa14.7□□□□□ -0.06
TPM1-212ENST00000558347 L3MBTL2Q969R5 705 aa14.7□□□□□ -0.06
TPM1-212ENST00000558347 ZNF316A6NFI3 1004 aaPredicted RBP14.69□□□□□ -0.06
TPM1-212ENST00000558347 WASLO00401 505 aaPredicted RBP14.69□□□□□ -0.06
TPM1-212ENST00000558347 PMFBP1Q8TBY8 1022 aa14.69□□□□□ -0.06
TPM1-212ENST00000558347 MARF1Q9Y4F3 1742 aaKnown RBP14.69□□□□□ -0.06
TPM1-212ENST00000558347 NEUROD1Q13562 356 aa14.68□□□□□ -0.06
TPM1-212ENST00000558347 NGLY1Q96IV0 654 aa14.68□□□□□ -0.06
TPM1-212ENST00000558347 RXRBP28702 533 aa14.67□□□□□ -0.06
TPM1-212ENST00000558347 TNS3Q68CZ2 1445 aa14.67□□□□□ -0.06
TPM1-212ENST00000558347 QTRT2Q9H974 415 aaKnown RBP14.66□□□□□ -0.06
TPM1-212ENST00000558347 EIF3AQ14152 1382 aaKnown RBP14.66□□□□□ -0.06
TPM1-212ENST00000558347 TRPM3Q9HCF6 1732 aaPredicted RBP14.66□□□□□ -0.06
TPM1-212ENST00000558347 ATP7BP35670 1465 aa14.66□□□□□ -0.06
TPM1-212ENST00000558347 PSME1Q06323 249 aa14.66□□□□□ -0.06
TPM1-212ENST00000558347 SBNO1A3KN83 1393 aa14.65□□□□□ -0.06
TPM1-212ENST00000558347 TRPM1Q7Z4N2 1603 aa14.65□□□□□ -0.06
TPM1-212ENST00000558347 ITSN1Q15811 1721 aa14.64□□□□□ -0.07
TPM1-212ENST00000558347 FNBP4Q8N3X1 1017 aaPredicted RBP14.64□□□□□ -0.07
TPM1-212ENST00000558347 USP21Q9UK80 565 aa14.64□□□□□ -0.07
TPM1-212ENST00000558347 TIMELESSQ9UNS1 1208 aa14.64□□□□□ -0.07
TPM1-212ENST00000558347 CDK12Q9NYV4 1490 aaPredicted RBP14.63□□□□□ -0.07
TPM1-212ENST00000558347 ABCA3Q99758 1704 aa14.63□□□□□ -0.07
TPM1-212ENST00000558347 TOPAZ1Q8N9V7 1692 aa14.62□□□□□ -0.07
TPM1-212ENST00000558347 NUDT16Q96DE0 195 aaKnown RBP14.62□□□□□ -0.07
TPM1-212ENST00000558347 CDK19Q9BWU1 502 aa14.62□□□□□ -0.07
TPM1-212ENST00000558347 BCL9LQ86UU0 1499 aa14.62□□□□□ -0.07
TPM1-212ENST00000558347 ALS2Q96Q42 1657 aa14.62□□□□□ -0.07
TPM1-212ENST00000558347 RGS12O14924 1447 aa14.62□□□□□ -0.07
TPM1-212ENST00000558347 PLEKHG5O94827 1062 aa14.61□□□□□ -0.07
TPM1-212ENST00000558347 RBM6P78332 1123 aaKnown RBP14.61□□□□□ -0.07
TPM1-212ENST00000558347 LMOD2Q6P5Q4 547 aa14.61□□□□□ -0.07
TPM1-212ENST00000558347 CABLES1Q8TDN4 633 aa14.61□□□□□ -0.07
TPM1-212ENST00000558347 QRICH2Q9H0J4 1663 aa14.61□□□□□ -0.07
TPM1-212ENST00000558347 CENPJQ9HC77 1338 aaPredicted RBP14.61□□□□□ -0.07
TPM1-212ENST00000558347 ATRNO75882 1429 aa14.61□□□□□ -0.07
TPM1-212ENST00000558347 ARHGEF10O15013 1369 aa14.61□□□□□ -0.07
TPM1-212ENST00000558347 GPRASP1Q5JY77 1395 aa14.6□□□□□ -0.07
TPM1-212ENST00000558347 NGDNQ8NEJ9 315 aaKnown RBP14.6□□□□□ -0.07
TPM1-212ENST00000558347 TRPC5Q9UL62 973 aaPredicted RBP14.6□□□□□ -0.07
TPM1-212ENST00000558347 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.59□□□□□ -0.07
TPM1-212ENST00000558347 CENPBP07199 599 aaPredicted RBP14.59□□□□□ -0.07
TPM1-212ENST00000558347 NBPF8Q3BBV2 869 aa14.59□□□□□ -0.07
TPM1-212ENST00000558347 SLIT2O94813 1529 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms