RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 RTEL1-TNFRSF6BF6WH68 1400 aa12.99□□□□□ -0.33
RD3L-201ENST00000557640 CEP162Q5TB80 1403 aa12.99□□□□□ -0.33
RD3L-201ENST00000557640 SOX12O15370 315 aa12.99□□□□□ -0.33
RD3L-201ENST00000557640 ARSIQ5FYB1 569 aa12.99□□□□□ -0.33
RD3L-201ENST00000557640 FBXO31Q5XUX0 539 aaPredicted RBP12.99□□□□□ -0.33
RD3L-201ENST00000557640 UBR1Q8IWV7 1749 aa12.98□□□□□ -0.33
RD3L-201ENST00000557640 ARHGEF5Q12774 1597 aa12.98□□□□□ -0.33
RD3L-201ENST00000557640 UGGT1Q9NYU2 1555 aa12.98□□□□□ -0.33
RD3L-201ENST00000557640 MED14O60244 1454 aa12.97□□□□□ -0.33
RD3L-201ENST00000557640 DHX29Q7Z478 1369 aaKnown RBP12.97□□□□□ -0.33
RD3L-201ENST00000557640 ABCC3O15438 1527 aa12.97□□□□□ -0.33
RD3L-201ENST00000557640 NCOA2Q15596 1464 aa12.97□□□□□ -0.33
RD3L-201ENST00000557640 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.96□□□□□ -0.33
RD3L-201ENST00000557640 CFAP65Q6ZU64 1925 aaKnown RBP12.96□□□□□ -0.34
RD3L-201ENST00000557640 NLRP1Q9C000 1473 aa12.95□□□□□ -0.34
RD3L-201ENST00000557640 NPHP4O75161 1426 aaPredicted RBP12.95□□□□□ -0.34
RD3L-201ENST00000557640 MAST1Q9Y2H9 1570 aa12.94□□□□□ -0.34
RD3L-201ENST00000557640 LRRC7Q96NW7 1537 aa12.94□□□□□ -0.34
RD3L-201ENST00000557640 PIP4K2BP78356 416 aa12.94□□□□□ -0.34
RD3L-201ENST00000557640 EIF2AK4Q9P2K8 1649 aaKnown RBP12.94□□□□□ -0.34
RD3L-201ENST00000557640 MS4A4AQ96JQ5 239 aa12.93□□□□□ -0.34
RD3L-201ENST00000557640 PHF8Q9UPP1 1060 aa12.93□□□□□ -0.34
RD3L-201ENST00000557640 ERVK-7P63135 1459 aa12.92□□□□□ -0.34
RD3L-201ENST00000557640 MIA2Q96PC5 1412 aa12.92□□□□□ -0.34
RD3L-201ENST00000557640 KIF3BO15066 747 aa12.91□□□□□ -0.34
RD3L-201ENST00000557640 CROCC2H7BZ55 1655 aa12.91□□□□□ -0.34
RD3L-201ENST00000557640 ZNF316A6NFI3 1004 aaPredicted RBP12.9□□□□□ -0.34
RD3L-201ENST00000557640 KHSRPQ92945 711 aaKnown RBP eCLIP12.9□□□□□ -0.34
RD3L-201ENST00000557640 RIOK3O14730 519 aaKnown RBP12.89□□□□□ -0.35
RD3L-201ENST00000557640 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.88□□□□□ -0.35
RD3L-201ENST00000557640 ZFP91Q96JP5 570 aaPredicted RBP12.88□□□□□ -0.35
RD3L-201ENST00000557640 PIK3C2BO00750 1634 aa12.88□□□□□ -0.35
RD3L-201ENST00000557640 PRDM15P57071 1507 aaPredicted RBP12.88□□□□□ -0.35
RD3L-201ENST00000557640 LSM11P83369 360 aaKnown RBP eCLIP12.87□□□□□ -0.35
RD3L-201ENST00000557640 SETD1AO15047 1707 aaKnown RBP12.87□□□□□ -0.35
RD3L-201ENST00000557640 ARHGAP23Q9P227 1491 aa12.86□□□□□ -0.35
RD3L-201ENST00000557640 SLIT1O75093 1534 aa12.85□□□□□ -0.35
RD3L-201ENST00000557640 WASHC2CQ9Y4E1 1318 aa12.85□□□□□ -0.35
RD3L-201ENST00000557640 VGFO15240 615 aaPredicted RBP12.84□□□□□ -0.35
RD3L-201ENST00000557640 TOM1O60784 492 aa12.84□□□□□ -0.35
RD3L-201ENST00000557640 SCAF11Q99590 1463 aaKnown RBP12.84□□□□□ -0.35
RD3L-201ENST00000557640 MAP3K1Q13233 1512 aa12.83□□□□□ -0.35
RD3L-201ENST00000557640 ANKLE2Q86XL3 938 aa12.83□□□□□ -0.36
RD3L-201ENST00000557640 LRRC9Q6ZRR7 1453 aa12.83□□□□□ -0.36
RD3L-201ENST00000557640 ROBO1Q9Y6N7 1651 aa12.82□□□□□ -0.36
RD3L-201ENST00000557640 RNF25Q96BH1 459 aaPredicted RBP12.81□□□□□ -0.36
RD3L-201ENST00000557640 RGS17Q9UGC6 210 aaPredicted RBP12.81□□□□□ -0.36
RD3L-201ENST00000557640 MYO5BQ9ULV0 1848 aa12.81□□□□□ -0.36
RD3L-201ENST00000557640 NLRP6P59044 892 aa12.8□□□□□ -0.36
RD3L-201ENST00000557640 THEMISQ8N1K5 641 aaPredicted RBP12.8□□□□□ -0.36
RD3L-201ENST00000557640 KDM5AP29375 1690 aaKnown RBP12.8□□□□□ -0.36
RD3L-201ENST00000557640 DUOX2Q9NRD8 1548 aa12.79□□□□□ -0.36
RD3L-201ENST00000557640 NWD1Q149M9 1564 aa12.79□□□□□ -0.36
RD3L-201ENST00000557640 NUDT7P0C024 238 aa12.77□□□□□ -0.37
RD3L-201ENST00000557640 LTKP29376 864 aa12.77□□□□□ -0.37
RD3L-201ENST00000557640 TET3O43151 1660 aa12.77□□□□□ -0.37
RD3L-201ENST00000557640 PLA2G2EQ9NZK7 142 aa12.76□□□□□ -0.37
RD3L-201ENST00000557640 MYOM3Q5VTT5 1437 aa12.76□□□□□ -0.37
RD3L-201ENST00000557640 VPS8Q8N3P4 1428 aa12.76□□□□□ -0.37
RD3L-201ENST00000557640 PBX2P40425 430 aa12.75□□□□□ -0.37
RD3L-201ENST00000557640 ARHGAP31Q2M1Z3 1444 aa12.75□□□□□ -0.37
RD3L-201ENST00000557640 PTPN23Q9H3S7 1636 aa12.75□□□□□ -0.37
RD3L-201ENST00000557640 AXIN2Q9Y2T1 843 aa12.75□□□□□ -0.37
RD3L-201ENST00000557640 ADGRB3O60242 1522 aa12.74□□□□□ -0.37
RD3L-201ENST00000557640 EFCAB6Q5THR3 1501 aa12.74□□□□□ -0.37
RD3L-201ENST00000557640 GCC2Q8IWJ2 1684 aa12.73□□□□□ -0.37
RD3L-201ENST00000557640 ERBINQ96RT1 1412 aa12.73□□□□□ -0.37
RD3L-201ENST00000557640 KANK4Q5T7N3 995 aaPredicted RBP12.73□□□□□ -0.37
RD3L-201ENST00000557640 PHLPP1O60346 1717 aa12.73□□□□□ -0.37
RD3L-201ENST00000557640 LMTK2Q8IWU2 1503 aa12.72□□□□□ -0.37
RD3L-201ENST00000557640 ABCC5O15440 1437 aa12.72□□□□□ -0.37
RD3L-201ENST00000557640 KIF15Q9NS87 1388 aa12.72□□□□□ -0.37
RD3L-201ENST00000557640 RSPH4AQ5TD94 716 aa12.72□□□□□ -0.37
RD3L-201ENST00000557640 COL16A1Q07092 1604 aaPredicted RBP12.72□□□□□ -0.37
RD3L-201ENST00000557640 FBXO22Q8NEZ5 403 aa12.71□□□□□ -0.37
RD3L-201ENST00000557640 HCSTQ9UBK5 93 aa12.71□□□□□ -0.37
RD3L-201ENST00000557640 LHX6Q9UPM6 363 aa12.71□□□□□ -0.37
RD3L-201ENST00000557640 CHD2O14647 1828 aaKnown RBP12.71□□□□□ -0.38
RD3L-201ENST00000557640 TMEM94Q12767 1356 aa12.7□□□□□ -0.38
RD3L-201ENST00000557640 TMEM2Q9UHN6 1383 aa12.7□□□□□ -0.38
RD3L-201ENST00000557640 C2orf72A6NCS6 295 aa12.7□□□□□ -0.38
RD3L-201ENST00000557640 POTEAQ6S8J7 498 aa12.7□□□□□ -0.38
RD3L-201ENST00000557640 BCL11BQ9C0K0 894 aaPredicted RBP12.7□□□□□ -0.38
RD3L-201ENST00000557640 FAM135BQ49AJ0 1406 aa12.7□□□□□ -0.38
RD3L-201ENST00000557640 TSPY4P0CV99 314 aa12.69□□□□□ -0.38
RD3L-201ENST00000557640 TSPY10P0CW01 314 aa12.69□□□□□ -0.38
RD3L-201ENST00000557640 NKTRP30414 1462 aaKnown RBP12.69□□□□□ -0.38
RD3L-201ENST00000557640 DAPK1P53355 1430 aa12.69□□□□□ -0.38
RD3L-201ENST00000557640 RBM33Q96EV2 1170 aaKnown RBP12.68□□□□□ -0.38
RD3L-201ENST00000557640 LRP6O75581 1613 aa12.68□□□□□ -0.38
RD3L-201ENST00000557640 POTEEQ6S8J3 1075 aa12.67□□□□□ -0.38
RD3L-201ENST00000557640 TXNDC2Q86VQ3 553 aa12.67□□□□□ -0.38
RD3L-201ENST00000557640 TAOK2Q9UL54 1235 aa12.67□□□□□ -0.38
RD3L-201ENST00000557640 PCDHGA4Q9Y5G9 962 aa12.67□□□□□ -0.38
RD3L-201ENST00000557640 STK24Q9Y6E0 443 aa12.67□□□□□ -0.38
RD3L-201ENST00000557640 NOS1P29475 1434 aa12.67□□□□□ -0.38
RD3L-201ENST00000557640 KIF3CO14782 793 aa12.66□□□□□ -0.38
RD3L-201ENST00000557640 ZFYVE9O95405 1425 aa12.65□□□□□ -0.38
RD3L-201ENST00000557640 TMEM131LA2VDJ0 1609 aa12.65□□□□□ -0.38
RD3L-201ENST00000557640 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms