RNA–Protein interactions for RNA: ENST00000557519.1

RPS29-208, Transcript of ribosomal protein S29, human

TSL 3

Gene RPS29, Length 333 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS29-208	ENST00000557519	C1orf167	Q5SNV9	1468 aa		14.03	□□□□□ -0.16
RPS29-208	ENST00000557519	COL16A1	Q07092	1604 aa	Predicted RBP	14.02	□□□□□ -0.16
RPS29-208	ENST00000557519	NHSL1	Q5SYE7	1610 aa		14.02	□□□□□ -0.16
RPS29-208	ENST00000557519	ADGRB1	O14514	1584 aa		14.02	□□□□□ -0.16
RPS29-208	ENST00000557519	EIF3A	Q14152	1382 aa	Known RBP	14.01	□□□□□ -0.17
RPS29-208	ENST00000557519	WAPL	Q7Z5K2	1190 aa		14.01	□□□□□ -0.17
RPS29-208	ENST00000557519	FMN2	Q9NZ56	1722 aa		13.99	□□□□□ -0.17
RPS29-208	ENST00000557519	SHPRH	Q149N8	1683 aa		13.99	□□□□□ -0.17
RPS29-208	ENST00000557519	NEUROD1	Q13562	356 aa		13.99	□□□□□ -0.17
RPS29-208	ENST00000557519	PRAM1	Q96QH2	718 aa		13.99	□□□□□ -0.17
RPS29-208	ENST00000557519	KIF1A	Q12756	1690 aa		13.98	□□□□□ -0.17
RPS29-208	ENST00000557519	SPATA31A6	Q5VVP1	1343 aa		13.98	□□□□□ -0.17
RPS29-208	ENST00000557519	ADGRB2	O60241	1585 aa		13.98	□□□□□ -0.17
RPS29-208	ENST00000557519	LRRC59	Q96AG4	307 aa	Known RBP	13.98	□□□□□ -0.17
RPS29-208	ENST00000557519	TRAK1	Q9UPV9	953 aa		13.98	□□□□□ -0.17
RPS29-208	ENST00000557519	TONSL	Q96HA7	1378 aa		13.97	□□□□□ -0.17
RPS29-208	ENST00000557519	PLEKHH1	Q9ULM0	1364 aa		13.97	□□□□□ -0.17
RPS29-208	ENST00000557519	NPHP3	Q7Z494	1330 aa		13.97	□□□□□ -0.17
RPS29-208	ENST00000557519	ESCO1	Q5FWF5	840 aa		13.97	□□□□□ -0.17
RPS29-208	ENST00000557519	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.96	□□□□□ -0.17
RPS29-208	ENST00000557519	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
RPS29-208	ENST00000557519	L3MBTL2	Q969R5	705 aa		13.95	□□□□□ -0.18
RPS29-208	ENST00000557519	SIN3A	Q96ST3	1273 aa		13.95	□□□□□ -0.18
RPS29-208	ENST00000557519	ANKAR	Q7Z5J8	1434 aa		13.95	□□□□□ -0.18
RPS29-208	ENST00000557519	MEX3C	Q5U5Q3	659 aa	Known RBP	13.94	□□□□□ -0.18
RPS29-208	ENST00000557519	ORAI2	Q96SN7	254 aa		13.93	□□□□□ -0.18
RPS29-208	ENST00000557519	TRPM1	Q7Z4N2	1603 aa		13.92	□□□□□ -0.18
RPS29-208	ENST00000557519	ROCK2	O75116	1388 aa	Known RBP	13.92	□□□□□ -0.18
RPS29-208	ENST00000557519	ITSN1	Q15811	1721 aa		13.92	□□□□□ -0.18
RPS29-208	ENST00000557519	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.91	□□□□□ -0.18
RPS29-208	ENST00000557519	NUTM2F	A1L443	756 aa		13.91	□□□□□ -0.18
RPS29-208	ENST00000557519	SOS2	Q07890	1332 aa	Predicted RBP	13.9	□□□□□ -0.18
RPS29-208	ENST00000557519	TULP4	Q9NRJ4	1543 aa		13.9	□□□□□ -0.18
RPS29-208	ENST00000557519	PSME1	Q06323	249 aa		13.9	□□□□□ -0.18
RPS29-208	ENST00000557519	WASL	O00401	505 aa	Predicted RBP	13.89	□□□□□ -0.19
RPS29-208	ENST00000557519	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.89	□□□□□ -0.19
RPS29-208	ENST00000557519	PHF8	Q9UPP1	1060 aa		13.89	□□□□□ -0.19
RPS29-208	ENST00000557519	CLSPN	Q9HAW4	1339 aa		13.89	□□□□□ -0.19
RPS29-208	ENST00000557519	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.89	□□□□□ -0.19
RPS29-208	ENST00000557519	RGPD8	O14715	1765 aa	Predicted RBP	13.88	□□□□□ -0.19
RPS29-208	ENST00000557519	PNPLA6	Q8IY17	1366 aa		13.88	□□□□□ -0.19
RPS29-208	ENST00000557519	FOXO3	O43524	673 aa		13.88	□□□□□ -0.19
RPS29-208	ENST00000557519	PCGF6	Q9BYE7	350 aa		13.88	□□□□□ -0.19
RPS29-208	ENST00000557519	NBPF1	Q3BBV0	1214 aa		13.87	□□□□□ -0.19
RPS29-208	ENST00000557519	DDX17	Q92841	729 aa	Known RBP	13.87	□□□□□ -0.19
RPS29-208	ENST00000557519	QRICH2	Q9H0J4	1663 aa		13.87	□□□□□ -0.19
RPS29-208	ENST00000557519	PXDN	Q92626	1479 aa		13.87	□□□□□ -0.19
RPS29-208	ENST00000557519	GPRASP1	Q5JY77	1395 aa		13.86	□□□□□ -0.19
RPS29-208	ENST00000557519	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.86	□□□□□ -0.19
RPS29-208	ENST00000557519	NUTM2E	B1AL46	878 aa	Predicted RBP	13.86	□□□□□ -0.19
RPS29-208	ENST00000557519	ZNF772	Q68DY9	489 aa	Predicted RBP	13.86	□□□□□ -0.19
RPS29-208	ENST00000557519	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.86	□□□□□ -0.19
RPS29-208	ENST00000557519	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.86	□□□□□ -0.19
RPS29-208	ENST00000557519	USP32	Q8NFA0	1604 aa		13.85	□□□□□ -0.19
RPS29-208	ENST00000557519	ARHGEF10	O15013	1369 aa		13.84	□□□□□ -0.19
RPS29-208	ENST00000557519	LRP6	O75581	1613 aa		13.84	□□□□□ -0.19
RPS29-208	ENST00000557519	KRT28	Q7Z3Y7	464 aa		13.84	□□□□□ -0.19
RPS29-208	ENST00000557519	RALGAPB	Q86X10	1494 aa		13.84	□□□□□ -0.19
RPS29-208	ENST00000557519	SBNO1	A3KN83	1393 aa		13.83	□□□□□ -0.19
RPS29-208	ENST00000557519	TNS3	Q68CZ2	1445 aa		13.83	□□□□□ -0.2
RPS29-208	ENST00000557519	NGDN	Q8NEJ9	315 aa	Known RBP	13.83	□□□□□ -0.2
RPS29-208	ENST00000557519	TIMELESS	Q9UNS1	1208 aa		13.83	□□□□□ -0.2
RPS29-208	ENST00000557519	ATP7B	P35670	1465 aa		13.82	□□□□□ -0.2
RPS29-208	ENST00000557519	HAP1	P54257	671 aa	Predicted RBP	13.82	□□□□□ -0.2
RPS29-208	ENST00000557519	SRPK2	P78362	688 aa	Known RBP	13.82	□□□□□ -0.2
RPS29-208	ENST00000557519	XPC	Q01831	940 aa	Predicted RBP	13.82	□□□□□ -0.2
RPS29-208	ENST00000557519	CDK19	Q9BWU1	502 aa		13.82	□□□□□ -0.2
RPS29-208	ENST00000557519	CARD11	Q9BXL7	1154 aa		13.82	□□□□□ -0.2
RPS29-208	ENST00000557519	EVC2	Q86UK5	1308 aa		13.82	□□□□□ -0.2
RPS29-208	ENST00000557519	PMFBP1	Q8TBY8	1022 aa		13.81	□□□□□ -0.2
RPS29-208	ENST00000557519	NUDT16	Q96DE0	195 aa	Known RBP	13.81	□□□□□ -0.2
RPS29-208	ENST00000557519	CCDC61	Q9Y6R9	512 aa		13.81	□□□□□ -0.2
RPS29-208	ENST00000557519	SPATA31A3	Q5VYP0	1347 aa		13.81	□□□□□ -0.2
RPS29-208	ENST00000557519	TOPAZ1	Q8N9V7	1692 aa		13.8	□□□□□ -0.2
RPS29-208	ENST00000557519	SLC24A1	O60721	1099 aa		13.8	□□□□□ -0.2
RPS29-208	ENST00000557519	LMOD2	Q6P5Q4	547 aa		13.8	□□□□□ -0.2
RPS29-208	ENST00000557519	ILDR2	Q71H61	639 aa		13.8	□□□□□ -0.2
RPS29-208	ENST00000557519	C8orf37	Q96NL8	207 aa		13.8	□□□□□ -0.2
RPS29-208	ENST00000557519	MARF1	Q9Y4F3	1742 aa	Known RBP	13.79	□□□□□ -0.2
RPS29-208	ENST00000557519	SOCS7	O14512	581 aa		13.78	□□□□□ -0.2
RPS29-208	ENST00000557519	ADAMTS2	O95450	1211 aa		13.78	□□□□□ -0.2
RPS29-208	ENST00000557519	NBPF8	Q3BBV2	869 aa		13.78	□□□□□ -0.2
RPS29-208	ENST00000557519	CCER1	Q8TC90	406 aa	Predicted RBP	13.78	□□□□□ -0.2
RPS29-208	ENST00000557519	NGLY1	Q96IV0	654 aa		13.78	□□□□□ -0.2
RPS29-208	ENST00000557519	AFF2	P51816	1311 aa		13.78	□□□□□ -0.2
RPS29-208	ENST00000557519	PRR36	Q9H6K5	1346 aa		13.78	□□□□□ -0.2
RPS29-208	ENST00000557519	SBNO2	Q9Y2G9	1366 aa		13.77	□□□□□ -0.21
RPS29-208	ENST00000557519	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.76	□□□□□ -0.21
RPS29-208	ENST00000557519	PPIP5K1	Q6PFW1	1433 aa		13.76	□□□□□ -0.21
RPS29-208	ENST00000557519	BRD4	O60885	1362 aa	Predicted RBP	13.76	□□□□□ -0.21
RPS29-208	ENST00000557519	PAK3	O75914	559 aa	Predicted RBP	13.76	□□□□□ -0.21
RPS29-208	ENST00000557519	RGS17	Q9UGC6	210 aa	Predicted RBP	13.76	□□□□□ -0.21
RPS29-208	ENST00000557519	POLR3A	O14802	1390 aa	Predicted RBP	13.75	□□□□□ -0.21
RPS29-208	ENST00000557519	ATAD2	Q6PL18	1390 aa		13.75	□□□□□ -0.21
RPS29-208	ENST00000557519	PLEKHG3	A1L390	1219 aa		13.75	□□□□□ -0.21
RPS29-208	ENST00000557519	ALS2	Q96Q42	1657 aa		13.75	□□□□□ -0.21
RPS29-208	ENST00000557519	RXRB	P28702	533 aa		13.74	□□□□□ -0.21
RPS29-208	ENST00000557519	CABP2	Q9NPB3	220 aa		13.74	□□□□□ -0.21
RPS29-208	ENST00000557519	ACE	P12821	1306 aa		13.73	□□□□□ -0.21
RPS29-208	ENST00000557519	POTEA	Q6S8J7	498 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms