RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 ROBO2Q9HCK4 1378 aa19.98■□□□□ 0.79
ARHGEF40-208ENST00000557498 CHD2O14647 1828 aaKnown RBP19.97■□□□□ 0.79
ARHGEF40-208ENST00000557498 WAPLQ7Z5K2 1190 aa19.97■□□□□ 0.79
ARHGEF40-208ENST00000557498 PUS7Q96PZ0 661 aaKnown RBP19.97■□□□□ 0.79
ARHGEF40-208ENST00000557498 MINK1Q8N4C8 1332 aaPredicted RBP19.97■□□□□ 0.79
ARHGEF40-208ENST00000557498 ANP32CO43423 234 aa19.95■□□□□ 0.78
ARHGEF40-208ENST00000557498 AMOTL2Q9Y2J4 779 aa19.95■□□□□ 0.78
ARHGEF40-208ENST00000557498 ADGRB2O60241 1585 aa19.95■□□□□ 0.78
ARHGEF40-208ENST00000557498 NWD1Q149M9 1564 aa19.93■□□□□ 0.78
ARHGEF40-208ENST00000557498 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.93■□□□□ 0.78
ARHGEF40-208ENST00000557498 HSPA2P54652 639 aa19.92■□□□□ 0.78
ARHGEF40-208ENST00000557498 PANK3Q9H999 370 aa19.9■□□□□ 0.78
ARHGEF40-208ENST00000557498 ATAD2Q6PL18 1390 aa19.9■□□□□ 0.78
ARHGEF40-208ENST00000557498 SRPK2P78362 688 aaKnown RBP19.89■□□□□ 0.77
ARHGEF40-208ENST00000557498 STRCQ7RTU9 1775 aa19.89■□□□□ 0.77
ARHGEF40-208ENST00000557498 CABP2Q9NPB3 220 aa19.89■□□□□ 0.77
ARHGEF40-208ENST00000557498 NINLQ9Y2I6 1382 aa19.88■□□□□ 0.77
ARHGEF40-208ENST00000557498 KCNA6P17658 529 aa19.88■□□□□ 0.77
ARHGEF40-208ENST00000557498 CDK19Q9BWU1 502 aa19.88■□□□□ 0.77
ARHGEF40-208ENST00000557498 WASLO00401 505 aaPredicted RBP19.86■□□□□ 0.77
ARHGEF40-208ENST00000557498 PER1O15534 1290 aaPredicted RBP19.86■□□□□ 0.77
ARHGEF40-208ENST00000557498 TMC1Q8TDI8 760 aa19.84■□□□□ 0.77
ARHGEF40-208ENST00000557498 PRKRIP1Q9H875 184 aaPredicted RBP19.84■□□□□ 0.77
ARHGEF40-208ENST00000557498 NKTRP30414 1462 aaKnown RBP19.83■□□□□ 0.76
ARHGEF40-208ENST00000557498 NALCNQ8IZF0 1738 aa19.82■□□□□ 0.76
ARHGEF40-208ENST00000557498 CCER2I3L3R5 266 aa19.82■□□□□ 0.76
ARHGEF40-208ENST00000557498 SLC12A5Q9H2X9 1139 aa19.82■□□□□ 0.76
ARHGEF40-208ENST00000557498 ANKRD36BQ8N2N9 1353 aa19.82■□□□□ 0.76
ARHGEF40-208ENST00000557498 KTN1Q86UP2 1357 aaKnown RBP19.81■□□□□ 0.76
ARHGEF40-208ENST00000557498 TOPAZ1Q8N9V7 1692 aa19.81■□□□□ 0.76
ARHGEF40-208ENST00000557498 USP32Q8NFA0 1604 aa19.8■□□□□ 0.76
ARHGEF40-208ENST00000557498 ATP7BP35670 1465 aa19.8■□□□□ 0.76
ARHGEF40-208ENST00000557498 KNSTRNQ9Y448 316 aa19.8■□□□□ 0.76
ARHGEF40-208ENST00000557498 CDC42BPGQ6DT37 1551 aa19.79■□□□□ 0.76
ARHGEF40-208ENST00000557498 FMN2Q9NZ56 1722 aa19.79■□□□□ 0.76
ARHGEF40-208ENST00000557498 NSD3Q9BZ95 1437 aa19.78■□□□□ 0.76
ARHGEF40-208ENST00000557498 STRCP1A6NGW2 1772 aa19.78■□□□□ 0.76
ARHGEF40-208ENST00000557498 CARD14Q9BXL6 1004 aa19.78■□□□□ 0.76
ARHGEF40-208ENST00000557498 NPC1L1Q9UHC9 1359 aa19.78■□□□□ 0.76
ARHGEF40-208ENST00000557498 CD163L1Q9NR16 1453 aa19.78■□□□□ 0.76
ARHGEF40-208ENST00000557498 ADGRL3Q9HAR2 1447 aa19.77■□□□□ 0.76
ARHGEF40-208ENST00000557498 ITSN1Q15811 1721 aa19.77■□□□□ 0.76
ARHGEF40-208ENST00000557498 PARD3Q8TEW0 1356 aa19.77■□□□□ 0.76
ARHGEF40-208ENST00000557498 PPIP5K1Q6PFW1 1433 aa19.76■□□□□ 0.75
ARHGEF40-208ENST00000557498 A0A1W2PP64 1363 aa19.76■□□□□ 0.75
ARHGEF40-208ENST00000557498 RALBP1Q15311 655 aa19.76■□□□□ 0.75
ARHGEF40-208ENST00000557498 AMER1Q5JTC6 1135 aaPredicted RBP19.76■□□□□ 0.75
ARHGEF40-208ENST00000557498 NUDT16Q96DE0 195 aaKnown RBP19.76■□□□□ 0.75
ARHGEF40-208ENST00000557498 PRR36Q9H6K5 1346 aa19.76■□□□□ 0.75
ARHGEF40-208ENST00000557498 CNGB1Q14028 1251 aaPredicted RBP19.74■□□□□ 0.75
ARHGEF40-208ENST00000557498 TERF2IPQ9NYB0 399 aa19.74■□□□□ 0.75
ARHGEF40-208ENST00000557498 CABP1Q9NZU7 370 aa19.74■□□□□ 0.75
ARHGEF40-208ENST00000557498 AKAP12Q02952 1782 aa19.74■□□□□ 0.75
ARHGEF40-208ENST00000557498 ANKARQ7Z5J8 1434 aa19.74■□□□□ 0.75
ARHGEF40-208ENST00000557498 CC2D1BQ5T0F9 858 aaKnown RBP19.73■□□□□ 0.75
ARHGEF40-208ENST00000557498 CCDC61Q9Y6R9 512 aa19.73■□□□□ 0.75
ARHGEF40-208ENST00000557498 MON2Q7Z3U7 1717 aa19.72■□□□□ 0.75
ARHGEF40-208ENST00000557498 HDGFL2Q7Z4V5 671 aaPredicted RBP19.72■□□□□ 0.75
ARHGEF40-208ENST00000557498 CPSF1Q10570 1443 aaKnown RBP19.71■□□□□ 0.75
ARHGEF40-208ENST00000557498 MYBBP1AQ9BQG0 1328 aaKnown RBP19.71■□□□□ 0.75
ARHGEF40-208ENST00000557498 PROSER2Q86WR7 435 aaPredicted RBP19.7■□□□□ 0.74
ARHGEF40-208ENST00000557498 RGPD8O14715 1765 aaPredicted RBP19.7■□□□□ 0.74
ARHGEF40-208ENST00000557498 RBM33Q96EV2 1170 aaKnown RBP19.69■□□□□ 0.74
ARHGEF40-208ENST00000557498 KIF20BQ96Q89 1820 aa19.69■□□□□ 0.74
ARHGEF40-208ENST00000557498 NSD2O96028 1365 aa19.69■□□□□ 0.74
ARHGEF40-208ENST00000557498 NCOA3Q9Y6Q9 1424 aa19.68■□□□□ 0.74
ARHGEF40-208ENST00000557498 CGNL1Q0VF96 1302 aa19.68■□□□□ 0.74
ARHGEF40-208ENST00000557498 ANKRD26Q9UPS8 1709 aa19.68■□□□□ 0.74
ARHGEF40-208ENST00000557498 NUTM2FA1L443 756 aa19.67■□□□□ 0.74
ARHGEF40-208ENST00000557498 PLEKHG3A1L390 1219 aa19.66■□□□□ 0.74
ARHGEF40-208ENST00000557498 C14orf37Q86TY3 774 aa19.66■□□□□ 0.74
ARHGEF40-208ENST00000557498 DMRT2Q9Y5R5 561 aa19.66■□□□□ 0.74
ARHGEF40-208ENST00000557498 TMEM94Q12767 1356 aa19.66■□□□□ 0.74
ARHGEF40-208ENST00000557498 NRKQ7Z2Y5 1582 aa19.66■□□□□ 0.74
ARHGEF40-208ENST00000557498 EDC4Q6P2E9 1401 aaKnown RBP19.65■□□□□ 0.74
ARHGEF40-208ENST00000557498 CCDC184Q52MB2 194 aa19.64■□□□□ 0.73
ARHGEF40-208ENST00000557498 MRS2Q9HD23 443 aa19.64■□□□□ 0.73
ARHGEF40-208ENST00000557498 BRD4O60885 1362 aaPredicted RBP19.64■□□□□ 0.73
ARHGEF40-208ENST00000557498 XIRP1Q702N8 1843 aaKnown RBP19.64■□□□□ 0.73
ARHGEF40-208ENST00000557498 DCCP43146 1447 aa19.63■□□□□ 0.73
ARHGEF40-208ENST00000557498 NLRP13Q86W25 1043 aa19.63■□□□□ 0.73
ARHGEF40-208ENST00000557498 POLR3AO14802 1390 aaPredicted RBP19.62■□□□□ 0.73
ARHGEF40-208ENST00000557498 ZNF335Q9H4Z2 1342 aaPredicted RBP19.62■□□□□ 0.73
ARHGEF40-208ENST00000557498 ZNF692Q9BU19 519 aaPredicted RBP19.62■□□□□ 0.73
ARHGEF40-208ENST00000557498 LRRC7Q96NW7 1537 aa19.61■□□□□ 0.73
ARHGEF40-208ENST00000557498 ACEP12821 1306 aa19.61■□□□□ 0.73
ARHGEF40-208ENST00000557498 USP6P35125 1406 aa19.6■□□□□ 0.73
ARHGEF40-208ENST00000557498 PPP2R1AP30153 589 aa19.6■□□□□ 0.73
ARHGEF40-208ENST00000557498 C19orf44Q9H6X5 657 aa19.6■□□□□ 0.73
ARHGEF40-208ENST00000557498 MORC1Q86VD1 984 aa19.59■□□□□ 0.73
ARHGEF40-208ENST00000557498 PMFBP1Q8TBY8 1022 aa19.58■□□□□ 0.72
ARHGEF40-208ENST00000557498 FYB1O15117 783 aa19.57■□□□□ 0.72
ARHGEF40-208ENST00000557498 YTHDC1Q96MU7 727 aaKnown RBP19.57■□□□□ 0.72
ARHGEF40-208ENST00000557498 MSH6P52701 1360 aa19.57■□□□□ 0.72
ARHGEF40-208ENST00000557498 KIF1AQ12756 1690 aa19.56■□□□□ 0.72
ARHGEF40-208ENST00000557498 GGNBP2Q9H3C7 697 aa19.56■□□□□ 0.72
ARHGEF40-208ENST00000557498 SSH2Q76I76 1423 aa19.56■□□□□ 0.72
ARHGEF40-208ENST00000557498 C1orf167Q5SNV9 1468 aa19.55■□□□□ 0.72
ARHGEF40-208ENST00000557498 MST1RQ04912 1400 aa19.55■□□□□ 0.72
ARHGEF40-208ENST00000557498 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms