RNA–Protein interactions for RNA: ENST00000557488.1

ITGA7-219, Transcript of integrin subunit alpha 7, humanhuman

TSL 3

Gene ITGA7, Length 296 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-219ENST00000557488 TRPM1Q7Z4N2 1603 aa20.78■□□□□ 0.92
ITGA7-219ENST00000557488 NUTM2FA1L443 756 aa20.77■□□□□ 0.92
ITGA7-219ENST00000557488 MST1RQ04912 1400 aa20.77■□□□□ 0.91
ITGA7-219ENST00000557488 FAM135BQ49AJ0 1406 aa20.77■□□□□ 0.91
ITGA7-219ENST00000557488 ROBO1Q9Y6N7 1651 aa20.77■□□□□ 0.91
ITGA7-219ENST00000557488 DLC1Q96QB1 1528 aa20.75■□□□□ 0.91
ITGA7-219ENST00000557488 POGKQ9P215 609 aa20.75■□□□□ 0.91
ITGA7-219ENST00000557488 ARHGEF28Q8N1W1 1705 aaKnown RBP20.74■□□□□ 0.91
ITGA7-219ENST00000557488 DDX17Q92841 729 aaKnown RBP20.74■□□□□ 0.91
ITGA7-219ENST00000557488 ORAI2Q96SN7 254 aa20.74■□□□□ 0.91
ITGA7-219ENST00000557488 HIRIP3Q9BW71 556 aaPredicted RBP20.74■□□□□ 0.91
ITGA7-219ENST00000557488 MINK1Q8N4C8 1332 aaPredicted RBP20.74■□□□□ 0.91
ITGA7-219ENST00000557488 BRINP3Q76B58 766 aa20.73■□□□□ 0.91
ITGA7-219ENST00000557488 RGPD8O14715 1765 aaPredicted RBP20.72■□□□□ 0.91
ITGA7-219ENST00000557488 DCCP43146 1447 aa20.71■□□□□ 0.91
ITGA7-219ENST00000557488 CLSPNQ9HAW4 1339 aa20.71■□□□□ 0.91
ITGA7-219ENST00000557488 C1orf167Q5SNV9 1468 aa20.7■□□□□ 0.9
ITGA7-219ENST00000557488 ROCK2O75116 1388 aaKnown RBP20.67■□□□□ 0.9
ITGA7-219ENST00000557488 FMN2Q9NZ56 1722 aa20.67■□□□□ 0.9
ITGA7-219ENST00000557488 CDC42BPGQ6DT37 1551 aa20.66■□□□□ 0.9
ITGA7-219ENST00000557488 GPRASP1Q5JY77 1395 aa20.64■□□□□ 0.89
ITGA7-219ENST00000557488 PRR36Q9H6K5 1346 aa20.64■□□□□ 0.89
ITGA7-219ENST00000557488 ESCO1Q5FWF5 840 aa20.63■□□□□ 0.89
ITGA7-219ENST00000557488 PHLPP1O60346 1717 aa20.63■□□□□ 0.89
ITGA7-219ENST00000557488 USP32Q8NFA0 1604 aa20.63■□□□□ 0.89
ITGA7-219ENST00000557488 RALGAPBQ86X10 1494 aa20.62■□□□□ 0.89
ITGA7-219ENST00000557488 WASLO00401 505 aaPredicted RBP20.62■□□□□ 0.89
ITGA7-219ENST00000557488 CARD11Q9BXL7 1154 aa20.62■□□□□ 0.89
ITGA7-219ENST00000557488 CDK19Q9BWU1 502 aa20.61■□□□□ 0.89
ITGA7-219ENST00000557488 CENPJQ9HC77 1338 aaPredicted RBP20.6■□□□□ 0.89
ITGA7-219ENST00000557488 TIMELESSQ9UNS1 1208 aa20.6■□□□□ 0.89
ITGA7-219ENST00000557488 ADGRB2O60241 1585 aa20.59■□□□□ 0.89
ITGA7-219ENST00000557488 FOXO3O43524 673 aa20.59■□□□□ 0.89
ITGA7-219ENST00000557488 XPCQ01831 940 aaPredicted RBP20.59■□□□□ 0.89
ITGA7-219ENST00000557488 COL16A1Q07092 1604 aaPredicted RBP20.59■□□□□ 0.89
ITGA7-219ENST00000557488 QRICH2Q9H0J4 1663 aa20.58■□□□□ 0.89
ITGA7-219ENST00000557488 NHSL1Q5SYE7 1610 aa20.58■□□□□ 0.89
ITGA7-219ENST00000557488 PMFBP1Q8TBY8 1022 aa20.58■□□□□ 0.89
ITGA7-219ENST00000557488 AHDC1Q5TGY3 1603 aaPredicted RBP20.57■□□□□ 0.88
ITGA7-219ENST00000557488 NUDT16Q96DE0 195 aaKnown RBP20.55■□□□□ 0.88
ITGA7-219ENST00000557488 CABP2Q9NPB3 220 aa20.55■□□□□ 0.88
ITGA7-219ENST00000557488 PHF8Q9UPP1 1060 aa20.54■□□□□ 0.88
ITGA7-219ENST00000557488 TULP4Q9NRJ4 1543 aa20.53■□□□□ 0.88
ITGA7-219ENST00000557488 SOS2Q07890 1332 aaPredicted RBP20.53■□□□□ 0.88
ITGA7-219ENST00000557488 ST20-MTHFSA0A0A6YYL1 179 aa20.51■□□□□ 0.87
ITGA7-219ENST00000557488 ANKARQ7Z5J8 1434 aa20.5■□□□□ 0.87
ITGA7-219ENST00000557488 ATP7BP35670 1465 aa20.5■□□□□ 0.87
ITGA7-219ENST00000557488 KRT28Q7Z3Y7 464 aa20.49■□□□□ 0.87
ITGA7-219ENST00000557488 PXDNQ92626 1479 aa20.49■□□□□ 0.87
ITGA7-219ENST00000557488 SRPK2P78362 688 aaKnown RBP20.48■□□□□ 0.87
ITGA7-219ENST00000557488 TESK2Q96S53 571 aa20.48■□□□□ 0.87
ITGA7-219ENST00000557488 LRRC59Q96AG4 307 aaKnown RBP20.46■□□□□ 0.87
ITGA7-219ENST00000557488 JCADQ9P266 1359 aa20.46■□□□□ 0.87
ITGA7-219ENST00000557488 CCDC61Q9Y6R9 512 aa20.45■□□□□ 0.86
ITGA7-219ENST00000557488 NPHP3Q7Z494 1330 aa20.45■□□□□ 0.86
ITGA7-219ENST00000557488 KIF1AQ12756 1690 aa20.45■□□□□ 0.86
ITGA7-219ENST00000557488 CABP1Q9NZU7 370 aa20.44■□□□□ 0.86
ITGA7-219ENST00000557488 EVC2Q86UK5 1308 aa20.44■□□□□ 0.86
ITGA7-219ENST00000557488 EIF3AQ14152 1382 aaKnown RBP20.44■□□□□ 0.86
ITGA7-219ENST00000557488 PNPLA6Q8IY17 1366 aa20.44■□□□□ 0.86
ITGA7-219ENST00000557488 USP47Q96K76 1375 aa20.44■□□□□ 0.86
ITGA7-219ENST00000557488 TOPAZ1Q8N9V7 1692 aa20.43■□□□□ 0.86
ITGA7-219ENST00000557488 NUTM2BA6NNL0 878 aaPredicted RBP20.43■□□□□ 0.86
ITGA7-219ENST00000557488 NUTM2EB1AL46 878 aaPredicted RBP20.43■□□□□ 0.86
ITGA7-219ENST00000557488 PSME1Q06323 249 aa20.43■□□□□ 0.86
ITGA7-219ENST00000557488 NUTM2AQ8IVF1 878 aaPredicted RBP20.43■□□□□ 0.86
ITGA7-219ENST00000557488 MED1Q15648 1581 aaPredicted RBP20.42■□□□□ 0.86
ITGA7-219ENST00000557488 PLEKHG3A1L390 1219 aa20.42■□□□□ 0.86
ITGA7-219ENST00000557488 ACEP12821 1306 aa20.42■□□□□ 0.86
ITGA7-219ENST00000557488 LRP6O75581 1613 aa20.42■□□□□ 0.86
ITGA7-219ENST00000557488 SHPRHQ149N8 1683 aa20.42■□□□□ 0.86
ITGA7-219ENST00000557488 NGDNQ8NEJ9 315 aaKnown RBP20.41■□□□□ 0.86
ITGA7-219ENST00000557488 SPATA31A3Q5VYP0 1347 aa20.41■□□□□ 0.86
ITGA7-219ENST00000557488 PLEKHG5O94827 1062 aa20.4■□□□□ 0.86
ITGA7-219ENST00000557488 ITSN1Q15811 1721 aa20.39■□□□□ 0.86
ITGA7-219ENST00000557488 PPIP5K1Q6PFW1 1433 aa20.39■□□□□ 0.85
ITGA7-219ENST00000557488 SBNO2Q9Y2G9 1366 aa20.39■□□□□ 0.85
ITGA7-219ENST00000557488 RGS17Q9UGC6 210 aaPredicted RBP20.39■□□□□ 0.85
ITGA7-219ENST00000557488 TRPM3Q9HCF6 1732 aaPredicted RBP20.39■□□□□ 0.85
ITGA7-219ENST00000557488 CABLES1Q8TDN4 633 aa20.38■□□□□ 0.85
ITGA7-219ENST00000557488 DISP3Q9P2K9 1392 aa20.37■□□□□ 0.85
ITGA7-219ENST00000557488 HSPA5P11021 654 aaKnown RBP20.37■□□□□ 0.85
ITGA7-219ENST00000557488 POLR3AO14802 1390 aaPredicted RBP20.36■□□□□ 0.85
ITGA7-219ENST00000557488 SLC12A5Q9H2X9 1139 aa20.36■□□□□ 0.85
ITGA7-219ENST00000557488 LMOD2Q6P5Q4 547 aa20.35■□□□□ 0.85
ITGA7-219ENST00000557488 SPATA31A6Q5VVP1 1343 aa20.34■□□□□ 0.85
ITGA7-219ENST00000557488 SBNO1A3KN83 1393 aa20.34■□□□□ 0.85
ITGA7-219ENST00000557488 PAK3O75914 559 aaPredicted RBP20.33■□□□□ 0.85
ITGA7-219ENST00000557488 ADAMTS2O95450 1211 aa20.33■□□□□ 0.85
ITGA7-219ENST00000557488 NUTM2GQ5VZR2 741 aa20.33■□□□□ 0.85
ITGA7-219ENST00000557488 ALS2Q96Q42 1657 aa20.32■□□□□ 0.84
ITGA7-219ENST00000557488 COL22A1Q8NFW1 1626 aaPredicted RBP20.32■□□□□ 0.84
ITGA7-219ENST00000557488 C11orf95C9JLR9 678 aaPredicted RBP20.32■□□□□ 0.84
ITGA7-219ENST00000557488 TNS3Q68CZ2 1445 aa20.31■□□□□ 0.84
ITGA7-219ENST00000557488 EIF4G2P78344 907 aaKnown RBP eCLIP20.3■□□□□ 0.84
ITGA7-219ENST00000557488 TMC1Q8TDI8 760 aa20.3■□□□□ 0.84
ITGA7-219ENST00000557488 CD163L1Q9NR16 1453 aa20.3■□□□□ 0.84
ITGA7-219ENST00000557488 ILDR2Q71H61 639 aa20.29■□□□□ 0.84
ITGA7-219ENST00000557488 AKAP12Q02952 1782 aa20.29■□□□□ 0.84
ITGA7-219ENST00000557488 ATAD2Q6PL18 1390 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms