RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ADGRB2O60241 1585 aa15.16■□□□□ 0.02
SHMT2-224ENST00000556737 STK26Q9P289 416 aa15.16■□□□□ 0.02
SHMT2-224ENST00000556737 WAPLQ7Z5K2 1190 aa15.15■□□□□ 0.02
SHMT2-224ENST00000556737 ARHGEF28Q8N1W1 1705 aaKnown RBP15.14■□□□□ 0.01
SHMT2-224ENST00000556737 KIAA1210Q9ULL0 1709 aa15.14■□□□□ 0.01
SHMT2-224ENST00000556737 PHF23Q9BUL5 403 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-224ENST00000556737 RGS17Q9UGC6 210 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-224ENST00000556737 DDX17Q92841 729 aaKnown RBP15.13■□□□□ 0.01
SHMT2-224ENST00000556737 KIF1AQ12756 1690 aa15.12■□□□□ 0.01
SHMT2-224ENST00000556737 DCAF11Q8TEB1 546 aa15.12■□□□□ 0.01
SHMT2-224ENST00000556737 SIRT1Q96EB6 747 aa15.12■□□□□ 0.01
SHMT2-224ENST00000556737 USP32Q8NFA0 1604 aa15.12■□□□□ 0.01
SHMT2-224ENST00000556737 COL22A1Q8NFW1 1626 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-224ENST00000556737 PXDNQ92626 1479 aa15.12■□□□□ 0.01
SHMT2-224ENST00000556737 SPATA31A6Q5VVP1 1343 aa15.12■□□□□ 0.01
SHMT2-224ENST00000556737 ORAI2Q96SN7 254 aa15.11■□□□□ 0.01
SHMT2-224ENST00000556737 RGPD8O14715 1765 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-224ENST00000556737 PNPLA6Q8IY17 1366 aa15.11■□□□□ 0.01
SHMT2-224ENST00000556737 SOCS7O14512 581 aa15.1■□□□□ 0.01
SHMT2-224ENST00000556737 STAC3Q96MF2 364 aa15.09■□□□□ 0.01
SHMT2-224ENST00000556737 KDM2AQ9Y2K7 1162 aa15.09■□□□□ 0.01
SHMT2-224ENST00000556737 SOS2Q07890 1332 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-224ENST00000556737 PRAM1Q96QH2 718 aa15.07■□□□□ 0
SHMT2-224ENST00000556737 ANKARQ7Z5J8 1434 aa15.05■□□□□ -0
SHMT2-224ENST00000556737 TRPM1Q7Z4N2 1603 aa15.04■□□□□ -0
SHMT2-224ENST00000556737 TULP4Q9NRJ4 1543 aa15.04■□□□□ -0
SHMT2-224ENST00000556737 NUTM2FA1L443 756 aa15.04■□□□□ -0
SHMT2-224ENST00000556737 ESCO1Q5FWF5 840 aa15.04■□□□□ -0
SHMT2-224ENST00000556737 POTEAQ6S8J7 498 aa15.04■□□□□ -0
SHMT2-224ENST00000556737 LRRC59Q96AG4 307 aaKnown RBP15.04■□□□□ -0
SHMT2-224ENST00000556737 NPHP3Q7Z494 1330 aa15.03■□□□□ -0
SHMT2-224ENST00000556737 SAFB2Q14151 953 aaKnown RBP eCLIP15.03■□□□□ -0
SHMT2-224ENST00000556737 TRAK1Q9UPV9 953 aa15.03■□□□□ -0
SHMT2-224ENST00000556737 ABCA3Q99758 1704 aa15.02□□□□□ -0.01
SHMT2-224ENST00000556737 MARF1Q9Y4F3 1742 aaKnown RBP15.02□□□□□ -0.01
SHMT2-224ENST00000556737 TOPAZ1Q8N9V7 1692 aa15.02□□□□□ -0.01
SHMT2-224ENST00000556737 TRPM3Q9HCF6 1732 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-224ENST00000556737 POGKQ9P215 609 aa15□□□□□ -0.01
SHMT2-224ENST00000556737 ATP7BP35670 1465 aa15□□□□□ -0.01
SHMT2-224ENST00000556737 ITSN1Q15811 1721 aa15□□□□□ -0.01
SHMT2-224ENST00000556737 NUTM2BA6NNL0 878 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-224ENST00000556737 NUTM2EB1AL46 878 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-224ENST00000556737 FOXO3O43524 673 aa14.99□□□□□ -0.01
SHMT2-224ENST00000556737 MEX3CQ5U5Q3 659 aaKnown RBP14.99□□□□□ -0.01
SHMT2-224ENST00000556737 NUTM2AQ8IVF1 878 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-224ENST00000556737 SIN3AQ96ST3 1273 aa14.99□□□□□ -0.01
SHMT2-224ENST00000556737 MINK1Q8N4C8 1332 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-224ENST00000556737 PRR36Q9H6K5 1346 aa14.98□□□□□ -0.01
SHMT2-224ENST00000556737 QRICH2Q9H0J4 1663 aa14.98□□□□□ -0.01
SHMT2-224ENST00000556737 XPCQ01831 940 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-224ENST00000556737 L3MBTL2Q969R5 705 aa14.98□□□□□ -0.01
SHMT2-224ENST00000556737 HIRIP3Q9BW71 556 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-224ENST00000556737 EIF3AQ14152 1382 aaKnown RBP14.97□□□□□ -0.01
SHMT2-224ENST00000556737 ALS2Q96Q42 1657 aa14.97□□□□□ -0.01
SHMT2-224ENST00000556737 TRIM26Q12899 539 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-224ENST00000556737 NBPF1Q3BBV0 1214 aa14.96□□□□□ -0.01
SHMT2-224ENST00000556737 TNS3Q68CZ2 1445 aa14.96□□□□□ -0.01
SHMT2-224ENST00000556737 AFF2P51816 1311 aa14.95□□□□□ -0.02
SHMT2-224ENST00000556737 CRYBG1Q9Y4K1 1723 aa14.95□□□□□ -0.02
SHMT2-224ENST00000556737 PHF8Q9UPP1 1060 aa14.95□□□□□ -0.02
SHMT2-224ENST00000556737 SPATA31A3Q5VYP0 1347 aa14.94□□□□□ -0.02
SHMT2-224ENST00000556737 WASLO00401 505 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-224ENST00000556737 ZNF772Q68DY9 489 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-224ENST00000556737 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.93□□□□□ -0.02
SHMT2-224ENST00000556737 SBNO1A3KN83 1393 aa14.93□□□□□ -0.02
SHMT2-224ENST00000556737 KRT28Q7Z3Y7 464 aa14.92□□□□□ -0.02
SHMT2-224ENST00000556737 C8orf37Q96NL8 207 aa14.92□□□□□ -0.02
SHMT2-224ENST00000556737 CDK12Q9NYV4 1490 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-224ENST00000556737 ADAMTS2O95450 1211 aa14.91□□□□□ -0.02
SHMT2-224ENST00000556737 NEUROD1Q13562 356 aa14.91□□□□□ -0.02
SHMT2-224ENST00000556737 PLCH1Q4KWH8 1693 aa14.9□□□□□ -0.02
SHMT2-224ENST00000556737 PMFBP1Q8TBY8 1022 aa14.9□□□□□ -0.02
SHMT2-224ENST00000556737 GPRASP1Q5JY77 1395 aa14.89□□□□□ -0.03
SHMT2-224ENST00000556737 RGS12O14924 1447 aa14.89□□□□□ -0.03
SHMT2-224ENST00000556737 CENPJQ9HC77 1338 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-224ENST00000556737 RALGAPBQ86X10 1494 aa14.89□□□□□ -0.03
SHMT2-224ENST00000556737 ARHGEF10O15013 1369 aa14.88□□□□□ -0.03
SHMT2-224ENST00000556737 ATRNO75882 1429 aa14.88□□□□□ -0.03
SHMT2-224ENST00000556737 BCL9LQ86UU0 1499 aa14.88□□□□□ -0.03
SHMT2-224ENST00000556737 PHRF1Q9P1Y6 1649 aaKnown RBP14.88□□□□□ -0.03
SHMT2-224ENST00000556737 SLIT2O94813 1529 aa14.87□□□□□ -0.03
SHMT2-224ENST00000556737 NBPF8Q3BBV2 869 aa14.87□□□□□ -0.03
SHMT2-224ENST00000556737 POLR3AO14802 1390 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-224ENST00000556737 ROCK2O75116 1388 aaKnown RBP14.86□□□□□ -0.03
SHMT2-224ENST00000556737 NWD2Q9ULI1 1742 aa14.86□□□□□ -0.03
SHMT2-224ENST00000556737 PSME1Q06323 249 aa14.86□□□□□ -0.03
SHMT2-224ENST00000556737 FNBP4Q8N3X1 1017 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-224ENST00000556737 NUDT16Q96DE0 195 aaKnown RBP14.86□□□□□ -0.03
SHMT2-224ENST00000556737 CDK19Q9BWU1 502 aa14.86□□□□□ -0.03
SHMT2-224ENST00000556737 NRAPQ86VF7 1730 aa14.86□□□□□ -0.03
SHMT2-224ENST00000556737 NGLY1Q96IV0 654 aa14.85□□□□□ -0.03
SHMT2-224ENST00000556737 RXRBP28702 533 aa14.84□□□□□ -0.03
SHMT2-224ENST00000556737 PCGF6Q9BYE7 350 aa14.84□□□□□ -0.03
SHMT2-224ENST00000556737 GLI3P10071 1580 aa14.84□□□□□ -0.03
SHMT2-224ENST00000556737 TONSLQ96HA7 1378 aa14.84□□□□□ -0.03
SHMT2-224ENST00000556737 CABLES1Q8TDN4 633 aa14.83□□□□□ -0.04
SHMT2-224ENST00000556737 USP21Q9UK80 565 aa14.83□□□□□ -0.04
SHMT2-224ENST00000556737 PPIP5K1Q6PFW1 1433 aa14.83□□□□□ -0.04
SHMT2-224ENST00000556737 NRKQ7Z2Y5 1582 aa14.82□□□□□ -0.04
SHMT2-224ENST00000556737 QTRT2Q9H974 415 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms