RNA–Protein interactions for RNA: ENST00000556669.1

LINC02299-201, Transcript of long intergenic non-protein coding RNA 2299, humanhuman

TSL 5 BASIC

Gene LINC02299, Length 430 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02299-201ENST00000556669 KNDC1Q76NI1 1749 aa22.16■■□□□ 1.14
LINC02299-201ENST00000556669 NHSL1Q5SYE7 1610 aa22.16■■□□□ 1.14
LINC02299-201ENST00000556669 DCAF11Q8TEB1 546 aa22.15■■□□□ 1.14
LINC02299-201ENST00000556669 DHX57Q6P158 1386 aaKnown RBP22.14■■□□□ 1.14
LINC02299-201ENST00000556669 SIRT1Q96EB6 747 aa22.12■■□□□ 1.13
LINC02299-201ENST00000556669 LRP6O75581 1613 aa22.12■■□□□ 1.13
LINC02299-201ENST00000556669 LAMC1P11047 1609 aa22.12■■□□□ 1.13
LINC02299-201ENST00000556669 CDC42BPGQ6DT37 1551 aa22.12■■□□□ 1.13
LINC02299-201ENST00000556669 SPATA31A6Q5VVP1 1343 aa22.11■■□□□ 1.13
LINC02299-201ENST00000556669 SHPRHQ149N8 1683 aa22.11■■□□□ 1.13
LINC02299-201ENST00000556669 ADGRB1O14514 1584 aa22.08■■□□□ 1.13
LINC02299-201ENST00000556669 NUTM2FA1L443 756 aa22.08■■□□□ 1.13
LINC02299-201ENST00000556669 POTEAQ6S8J7 498 aa22.08■■□□□ 1.13
LINC02299-201ENST00000556669 LRRC59Q96AG4 307 aaKnown RBP22.08■■□□□ 1.13
LINC02299-201ENST00000556669 STAC3Q96MF2 364 aa22.07■■□□□ 1.12
LINC02299-201ENST00000556669 ESCO1Q5FWF5 840 aa22.06■■□□□ 1.12
LINC02299-201ENST00000556669 PRAM1Q96QH2 718 aa22.06■■□□□ 1.12
LINC02299-201ENST00000556669 SOS2Q07890 1332 aaPredicted RBP22.06■■□□□ 1.12
LINC02299-201ENST00000556669 SAFB2Q14151 953 aaKnown RBP eCLIP22.05■■□□□ 1.12
LINC02299-201ENST00000556669 PNPLA6Q8IY17 1366 aa22.04■■□□□ 1.12
LINC02299-201ENST00000556669 NUTM2BA6NNL0 878 aaPredicted RBP22.04■■□□□ 1.12
LINC02299-201ENST00000556669 NUTM2EB1AL46 878 aaPredicted RBP22.04■■□□□ 1.12
LINC02299-201ENST00000556669 NUTM2AQ8IVF1 878 aaPredicted RBP22.04■■□□□ 1.12
LINC02299-201ENST00000556669 DLC1Q96QB1 1528 aa22.03■■□□□ 1.12
LINC02299-201ENST00000556669 TRAK1Q9UPV9 953 aa22.03■■□□□ 1.12
LINC02299-201ENST00000556669 FMN2Q9NZ56 1722 aa22.02■■□□□ 1.12
LINC02299-201ENST00000556669 MEX3CQ5U5Q3 659 aaKnown RBP22.01■■□□□ 1.11
LINC02299-201ENST00000556669 FOXO3O43524 673 aa22■■□□□ 1.11
LINC02299-201ENST00000556669 POGKQ9P215 609 aa22■■□□□ 1.11
LINC02299-201ENST00000556669 NPHP3Q7Z494 1330 aa21.99■■□□□ 1.11
LINC02299-201ENST00000556669 XPCQ01831 940 aaPredicted RBP21.98■■□□□ 1.11
LINC02299-201ENST00000556669 PXDNQ92626 1479 aa21.97■■□□□ 1.11
LINC02299-201ENST00000556669 SIN3AQ96ST3 1273 aa21.97■■□□□ 1.11
LINC02299-201ENST00000556669 HIRIP3Q9BW71 556 aaPredicted RBP21.95■■□□□ 1.1
LINC02299-201ENST00000556669 RGPD8O14715 1765 aaPredicted RBP21.94■■□□□ 1.1
LINC02299-201ENST00000556669 MINK1Q8N4C8 1332 aaPredicted RBP21.94■■□□□ 1.1
LINC02299-201ENST00000556669 ADGRB2O60241 1585 aa21.92■■□□□ 1.1
LINC02299-201ENST00000556669 NBPF1Q3BBV0 1214 aa21.92■■□□□ 1.1
LINC02299-201ENST00000556669 ZNF772Q68DY9 489 aaPredicted RBP21.92■■□□□ 1.1
LINC02299-201ENST00000556669 PHF8Q9UPP1 1060 aa21.92■■□□□ 1.1
LINC02299-201ENST00000556669 L3MBTL2Q969R5 705 aa21.91■■□□□ 1.1
LINC02299-201ENST00000556669 AFF2P51816 1311 aa21.9■■□□□ 1.1
LINC02299-201ENST00000556669 ADAMTS2O95450 1211 aa21.9■■□□□ 1.1
LINC02299-201ENST00000556669 C8orf37Q96NL8 207 aa21.9■■□□□ 1.1
LINC02299-201ENST00000556669 KIF1AQ12756 1690 aa21.9■■□□□ 1.1
LINC02299-201ENST00000556669 USP32Q8NFA0 1604 aa21.9■■□□□ 1.1
LINC02299-201ENST00000556669 ARHGEF28Q8N1W1 1705 aaKnown RBP21.89■■□□□ 1.1
LINC02299-201ENST00000556669 NEUROD1Q13562 356 aa21.89■■□□□ 1.09
LINC02299-201ENST00000556669 KIAA1210Q9ULL0 1709 aa21.89■■□□□ 1.09
LINC02299-201ENST00000556669 COL22A1Q8NFW1 1626 aaPredicted RBP21.88■■□□□ 1.09
LINC02299-201ENST00000556669 PRR36Q9H6K5 1346 aa21.88■■□□□ 1.09
LINC02299-201ENST00000556669 KRT28Q7Z3Y7 464 aa21.88■■□□□ 1.09
LINC02299-201ENST00000556669 PIAS4Q8N2W9 510 aaPredicted RBP21.88■■□□□ 1.09
LINC02299-201ENST00000556669 ANKARQ7Z5J8 1434 aa21.88■■□□□ 1.09
LINC02299-201ENST00000556669 WASLO00401 505 aaPredicted RBP21.87■■□□□ 1.09
LINC02299-201ENST00000556669 TRIM26Q12899 539 aaPredicted RBP21.87■■□□□ 1.09
LINC02299-201ENST00000556669 SPATA31A3Q5VYP0 1347 aa21.86■■□□□ 1.09
LINC02299-201ENST00000556669 PMFBP1Q8TBY8 1022 aa21.86■■□□□ 1.09
LINC02299-201ENST00000556669 NGLY1Q96IV0 654 aa21.84■■□□□ 1.09
LINC02299-201ENST00000556669 TULP4Q9NRJ4 1543 aa21.83■■□□□ 1.09
LINC02299-201ENST00000556669 EIF3AQ14152 1382 aaKnown RBP21.8■■□□□ 1.08
LINC02299-201ENST00000556669 RXRBP28702 533 aa21.8■■□□□ 1.08
LINC02299-201ENST00000556669 PSME1Q06323 249 aa21.8■■□□□ 1.08
LINC02299-201ENST00000556669 QTRT2Q9H974 415 aaKnown RBP21.8■■□□□ 1.08
LINC02299-201ENST00000556669 TNS3Q68CZ2 1445 aa21.8■■□□□ 1.08
LINC02299-201ENST00000556669 SBNO1A3KN83 1393 aa21.79■■□□□ 1.08
LINC02299-201ENST00000556669 FNBP4Q8N3X1 1017 aaPredicted RBP21.78■■□□□ 1.08
LINC02299-201ENST00000556669 CDK19Q9BWU1 502 aa21.78■■□□□ 1.08
LINC02299-201ENST00000556669 NUDT16Q96DE0 195 aaKnown RBP21.77■■□□□ 1.08
LINC02299-201ENST00000556669 ATP7BP35670 1465 aa21.77■■□□□ 1.07
LINC02299-201ENST00000556669 CABLES1Q8TDN4 633 aa21.76■■□□□ 1.07
LINC02299-201ENST00000556669 USP21Q9UK80 565 aa21.76■■□□□ 1.07
LINC02299-201ENST00000556669 TRPM1Q7Z4N2 1603 aa21.75■■□□□ 1.07
LINC02299-201ENST00000556669 NBPF8Q3BBV2 869 aa21.74■■□□□ 1.07
LINC02299-201ENST00000556669 LMOD2Q6P5Q4 547 aa21.74■■□□□ 1.07
LINC02299-201ENST00000556669 CENPJQ9HC77 1338 aaPredicted RBP21.74■■□□□ 1.07
LINC02299-201ENST00000556669 TRPM3Q9HCF6 1732 aaPredicted RBP21.73■■□□□ 1.07
LINC02299-201ENST00000556669 MARF1Q9Y4F3 1742 aaKnown RBP21.73■■□□□ 1.07
LINC02299-201ENST00000556669 PLEKHG5O94827 1062 aa21.73■■□□□ 1.07
LINC02299-201ENST00000556669 RBM6P78332 1123 aaKnown RBP21.73■■□□□ 1.07
LINC02299-201ENST00000556669 NGDNQ8NEJ9 315 aaKnown RBP21.73■■□□□ 1.07
LINC02299-201ENST00000556669 CDK12Q9NYV4 1490 aaPredicted RBP21.72■■□□□ 1.07
LINC02299-201ENST00000556669 ARHGEF10O15013 1369 aa21.72■■□□□ 1.07
LINC02299-201ENST00000556669 GPRASP1Q5JY77 1395 aa21.72■■□□□ 1.07
LINC02299-201ENST00000556669 BCL9LQ86UU0 1499 aa21.71■■□□□ 1.07
LINC02299-201ENST00000556669 TRPC5Q9UL62 973 aaPredicted RBP21.7■■□□□ 1.06
LINC02299-201ENST00000556669 ROCK2O75116 1388 aaKnown RBP21.7■■□□□ 1.06
LINC02299-201ENST00000556669 ATRNO75882 1429 aa21.7■■□□□ 1.06
LINC02299-201ENST00000556669 CCDC61Q9Y6R9 512 aa21.69■■□□□ 1.06
LINC02299-201ENST00000556669 RGS12O14924 1447 aa21.69■■□□□ 1.06
LINC02299-201ENST00000556669 ITSN1Q15811 1721 aa21.69■■□□□ 1.06
LINC02299-201ENST00000556669 ALS2Q96Q42 1657 aa21.68■■□□□ 1.06
LINC02299-201ENST00000556669 ABCA3Q99758 1704 aa21.67■■□□□ 1.06
LINC02299-201ENST00000556669 TOPAZ1Q8N9V7 1692 aa21.67■■□□□ 1.06
LINC02299-201ENST00000556669 QRICH2Q9H0J4 1663 aa21.67■■□□□ 1.06
LINC02299-201ENST00000556669 SLIT2O94813 1529 aa21.67■■□□□ 1.06
LINC02299-201ENST00000556669 HAP1P54257 671 aaPredicted RBP21.67■■□□□ 1.06
LINC02299-201ENST00000556669 CABP2Q9NPB3 220 aa21.67■■□□□ 1.06
LINC02299-201ENST00000556669 POLR3AO14802 1390 aaPredicted RBP21.66■■□□□ 1.06
LINC02299-201ENST00000556669 ACEP12821 1306 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms